Strain Fitness in Dickeya dianthicola 67-19 around HGI48_RS12430

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
2,716,278	-				+1.7
2,716,278	-				-0.4
2,716,548	+				-1.3
2,716,610	-				-0.4
2,716,610	-				-1.1
2,716,610	-				-0.5
2,716,610	-				-0.2
2,716,613	+				+0.3
2,716,643	+				-1.2
2,716,643	+				-0.6
2,716,648	+				-2.2
2,716,648	+				+0.2
2,716,747	-				-1.4
2,716,821	+				+1.2
2,716,822	-		HGI48_RS12425	0.23	-0.2
2,717,002	-				-0.8
2,717,002	-				-1.4
2,717,041	+				-0.1
2,717,063	+				-0.8
2,717,063	+				-2.7
2,717,063	+				-1.8
2,717,063	+				+0.4
2,717,063	+				-0.8
2,717,064	-				-0.3
2,717,064	-				-0.3
2,717,064	-				-0.8
2,717,064	-				+0.2
2,717,081	+				+0.3
2,717,220	+		HGI48_RS12430	0.30	-1.1
2,717,220	+		HGI48_RS12430	0.30	-0.5
2,717,221	-		HGI48_RS12430	0.30	-0.8
2,717,298	+				+2.5
2,717,299	-		HGI48_RS12430	0.46	-0.8
2,717,299	-		HGI48_RS12430	0.46	-0.1
2,717,542	+				-0.7
2,717,569	+				-0.7
2,717,569	+				-0.7
2,717,569	+				+0.7
2,717,570	-				-1.6
2,717,639	+				+0.2
2,717,698	+				-0.1
2,717,698	+				+1.0
2,717,698	+				-0.3
2,717,698	+				-3.0
2,717,698	+				+2.0
2,717,698	+				-1.3
2,717,698	+				-0.5
2,717,698	+				-0.7
2,717,698	+				+0.1
2,717,699	-				-0.6
2,717,699	-				-0.8
2,717,699	-				-0.1
2,717,788	+				-1.8
2,717,907	-		HGI48_RS12435	0.18	+0.6
2,717,922	+		HGI48_RS12435	0.19	-0.3
2,717,922	+		HGI48_RS12435	0.19	+0.2
2,717,922	+				+0.2
2,717,922	+		HGI48_RS12435	0.19	-1.3
2,717,923	-		HGI48_RS12435	0.20	-2.8
2,718,110	+		HGI48_RS12435	0.33	-0.8
2,718,156	+		HGI48_RS12435	0.36	-2.8
2,718,182	+		HGI48_RS12435	0.38	+0.6
2,718,183	-		HGI48_RS12435	0.38	-0.3
2,718,183	-		HGI48_RS12435	0.38	+0.1
2,718,198	+				-1.4
2,718,198	+		HGI48_RS12435	0.39	-2.7
2,718,199	-		HGI48_RS12435	0.39	-0.5
2,718,199	-		HGI48_RS12435	0.39	-0.8
2,718,406	+				+0.6
2,718,406	+		HGI48_RS12435	0.54	+0.2
2,718,406	+		HGI48_RS12435	0.54	+0.2
2,718,407	-		HGI48_RS12435	0.54	-0.2
2,718,407	-				+1.6