Strain Fitness in Dickeya dianthicola 67-19 around HGI48_RS12060

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
2,633,311	+		HGI48_RS12055	0.59	-2.7
2,633,312	-		HGI48_RS12055	0.59	-0.9
2,633,367	+		HGI48_RS12055	0.62	-0.9
2,633,367	+		HGI48_RS12055	0.62	-1.3
2,633,368	-		HGI48_RS12055	0.62	-0.2
2,633,625	+				-0.9
2,633,625	+		HGI48_RS12055	0.75	+0.1
2,634,036	-				-1.5
2,634,064	+				-5.3
2,634,309	-		HGI48_RS12060	0.21	-1.5
2,634,601	-		HGI48_RS12060	0.61	-4.9
2,634,696	-		HGI48_RS12060	0.74	-0.4
2,634,944	+				-1.5
2,634,945	-				+0.4
2,634,946	+				-0.3
2,634,946	+				-0.5
2,634,946	+				-1.1
2,634,947	-				-0.3
2,634,968	+				-1.1
2,634,968	+				+0.1
2,634,969	-				+0.4
2,634,989	+				-0.0
2,634,989	+				-0.5
2,634,989	+				-2.7
2,635,038	+		HGI48_RS12065	0.13	-1.8
2,635,116	+				+1.5
2,635,155	+		HGI48_RS12065	0.36	+0.4
2,635,155	+		HGI48_RS12065	0.36	+0.3
2,635,155	+		HGI48_RS12065	0.36	-1.6
2,635,156	-		HGI48_RS12065	0.36	+0.6
2,635,156	-		HGI48_RS12065	0.36	+0.1
2,635,156	-		HGI48_RS12065	0.36	+0.8
2,635,156	-		HGI48_RS12065	0.36	+0.4
2,635,156	-		HGI48_RS12065	0.36	-0.7
2,635,275	-		HGI48_RS12065	0.60	+0.7
2,635,336	+		HGI48_RS12065	0.72	-1.1
2,635,447	-				+0.1
2,635,447	-				+0.5
2,635,505	+				+0.4
2,635,540	+				-0.6
2,635,540	+				+0.2
2,635,541	-				-1.1
2,635,543	+				-1.5
2,635,543	+				-2.7
2,635,564	+				-1.9
2,635,626	+				+0.3
2,635,626	+				-0.3
2,635,734	+				+0.5
2,635,734	+				+0.1
2,635,735	-				-0.2
2,635,735	-				-1.7
2,635,735	-				+0.8
2,635,739	+				-0.1
2,635,739	+				-0.0
2,635,740	-				-0.3
2,635,740	-				-1.9
2,635,747	+				-0.9
2,635,747	+				-1.1
2,635,748	-				-0.7