Strain Fitness in Dickeya dianthicola 67-19 around HGI48_RS11925

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
2,602,567	+		HGI48_RS11915	0.42	-1.2
2,602,567	+		HGI48_RS11915	0.42	+0.4
2,602,569	+		HGI48_RS11915	0.42	+0.5
2,602,569	+		HGI48_RS11915	0.42	-0.3
2,602,569	+		HGI48_RS11915	0.42	-1.2
2,602,569	+				-0.9
2,602,570	-		HGI48_RS11915	0.42	-0.3
2,602,678	-		HGI48_RS11915	0.53	-1.3
2,602,678	-		HGI48_RS11915	0.53	-2.1
2,602,678	-		HGI48_RS11915	0.53	-0.0
2,602,678	-		HGI48_RS11915	0.53	-0.8
2,602,760	+		HGI48_RS11915	0.61	-2.7
2,602,764	+		HGI48_RS11915	0.61	-0.0
2,602,764	+		HGI48_RS11915	0.61	-1.6
2,602,764	+		HGI48_RS11915	0.61	+0.1
2,602,765	-		HGI48_RS11915	0.61	+0.1
2,602,765	-		HGI48_RS11915	0.61	-0.9
2,602,765	-		HGI48_RS11915	0.61	-0.7
2,602,765	-		HGI48_RS11915	0.61	-0.1
2,602,765	-		HGI48_RS11915	0.61	-1.9
2,602,765	-		HGI48_RS11915	0.61	-0.3
2,602,777	+		HGI48_RS11915	0.62	-0.1
2,602,834	+		HGI48_RS11915	0.68	-1.3
2,602,896	+		HGI48_RS11915	0.74	+0.5
2,602,978	-		HGI48_RS11915	0.82	-0.2
2,603,007	+		HGI48_RS11915	0.85	-0.2
2,603,007	+		HGI48_RS11915	0.85	-1.9
2,603,008	-		HGI48_RS11915	0.85	-0.6
2,603,008	-		HGI48_RS11915	0.85	-0.5
2,603,051	-		HGI48_RS11915	0.89	+0.1
2,603,117	+				-1.3
2,603,118	-				-1.9
2,603,118	-				-1.5
2,603,118	-				-0.3
2,603,186	+				-1.1
2,603,186	+				-0.1
2,603,187	-				+0.1
2,603,235	-				+0.2
2,603,239	+				-0.6
2,603,248	-		HGI48_RS11920	0.13	+0.5
2,603,269	-		HGI48_RS11920	0.23	-0.3
2,603,354	+		HGI48_RS11920	0.64	+1.2
2,603,354	+		HGI48_RS11920	0.64	-0.1
2,603,354	+		HGI48_RS11920	0.64	-0.5
2,603,354	+		HGI48_RS11920	0.64	-0.9
2,603,381	-		HGI48_RS11920	0.77	-0.9
2,603,409	-				-0.9
2,603,409	-				-1.5
2,603,409	-				-0.4
2,603,409	-				-0.9
2,603,409	-				+0.1
2,603,410	+				-0.4
2,603,410	+				+1.0
2,603,410	+				-0.0
2,603,411	-				-0.7
2,603,411	-				-1.5
2,603,411	-				-0.6
2,603,427	-				+0.1
2,603,444	+				-0.6
2,603,445	-				-0.1
2,603,472	-				-0.5
2,603,472	-				-1.7
2,603,582	+				+0.1
2,603,604	-				-2.5
2,603,623	-				-0.9
2,603,679	+				-0.4
2,603,679	+				-1.3
2,603,835	-		HGI48_RS11925	0.20	+0.1
2,603,838	+				+0.5
2,603,838	+		HGI48_RS11925	0.20	+0.1
2,603,839	-		HGI48_RS11925	0.20	-0.5
2,603,839	-		HGI48_RS11925	0.20	-0.5
2,603,839	-		HGI48_RS11925	0.20	-0.7
2,603,839	-		HGI48_RS11925	0.20	-0.6
2,603,839	-		HGI48_RS11925	0.20	+0.4
2,603,839	-		HGI48_RS11925	0.20	+0.3
2,603,839	-		HGI48_RS11925	0.20	+0.1
2,603,968	+				+1.1
2,603,988	+		HGI48_RS11925	0.31	+0.2
2,603,988	+		HGI48_RS11925	0.31	-1.2
2,603,988	+		HGI48_RS11925	0.31	-0.6
2,603,988	+		HGI48_RS11925	0.31	-0.4
2,603,988	+		HGI48_RS11925	0.31	-0.2
2,603,988	+		HGI48_RS11925	0.31	-0.5
2,603,988	+		HGI48_RS11925	0.31	+0.8
2,603,989	-		HGI48_RS11925	0.31	-4.2
2,603,989	-		HGI48_RS11925	0.31	+0.7
2,603,989	-		HGI48_RS11925	0.31	+0.1
2,603,989	-		HGI48_RS11925	0.31	-0.6
2,603,989	-		HGI48_RS11925	0.31	-0.9
2,603,989	-		HGI48_RS11925	0.31	-1.2
2,604,030	+		HGI48_RS11925	0.34	+0.4
2,604,030	+		HGI48_RS11925	0.34	+0.1
2,604,030	+		HGI48_RS11925	0.34	+0.7
2,604,030	+		HGI48_RS11925	0.34	-0.8
2,604,030	+		HGI48_RS11925	0.34	+0.7
2,604,031	-		HGI48_RS11925	0.35	-0.7
2,604,031	-		HGI48_RS11925	0.35	-0.7
2,604,031	-				+1.7
2,604,108	+				-0.5
2,604,108	+		HGI48_RS11925	0.40	-0.0
2,604,108	+		HGI48_RS11925	0.40	-0.8
2,604,108	+		HGI48_RS11925	0.40	-0.3
2,604,108	+				+1.1
2,604,109	-		HGI48_RS11925	0.40	-0.9
2,604,110	+		HGI48_RS11925	0.40	-1.9
2,604,110	+		HGI48_RS11925	0.40	+0.1
2,604,111	-		HGI48_RS11925	0.40	-0.9
2,604,120	+		HGI48_RS11925	0.41	+0.1
2,604,235	+		HGI48_RS11925	0.50	-0.7
2,604,236	-		HGI48_RS11925	0.50	-1.2
2,604,236	-		HGI48_RS11925	0.50	+0.4
2,604,318	+		HGI48_RS11925	0.56	-1.5
2,604,319	-		HGI48_RS11925	0.56	-0.6
2,604,319	-		HGI48_RS11925	0.56	-0.7
2,604,319	-		HGI48_RS11925	0.56	-1.5
2,604,319	-		HGI48_RS11925	0.56	-1.7
2,604,423	+		HGI48_RS11925	0.63	-1.0
2,604,448	-		HGI48_RS11925	0.65	+0.5
2,604,582	+		HGI48_RS11925	0.75	+0.1
2,604,582	+		HGI48_RS11925	0.75	-0.3
2,604,582	+		HGI48_RS11925	0.75	-1.2
2,604,582	+		HGI48_RS11925	0.75	-0.2
2,604,582	+				-1.5
2,604,582	+		HGI48_RS11925	0.75	-0.2
2,604,582	+		HGI48_RS11925	0.75	-0.8
2,604,582	+		HGI48_RS11925	0.75	+0.4
2,604,583	-		HGI48_RS11925	0.75	+1.1
2,604,583	-		HGI48_RS11925	0.75	-1.1
2,604,583	-		HGI48_RS11925	0.75	-0.9
2,604,583	-		HGI48_RS11925	0.75	+0.2
2,604,590	+		HGI48_RS11925	0.76	+0.4
2,604,590	+		HGI48_RS11925	0.76	-1.2
2,604,590	+		HGI48_RS11925	0.76	+0.3
2,604,591	-		HGI48_RS11925	0.76	+0.4
2,604,591	-		HGI48_RS11925	0.76	-0.3
2,604,591	-		HGI48_RS11925	0.76	-1.4
2,604,615	+		HGI48_RS11925	0.78	-0.6
2,604,616	-				+1.1
2,604,637	+				+0.1
2,604,637	+		HGI48_RS11925	0.79	-0.6
2,604,637	+				+0.5
2,604,638	-		HGI48_RS11925	0.79	-1.3
2,604,638	-		HGI48_RS11925	0.79	+0.8
2,604,638	-		HGI48_RS11925	0.79	-0.1
2,604,672	+		HGI48_RS11925	0.82	+0.4
2,604,672	+				+2.4
2,604,673	-		HGI48_RS11925	0.82	-0.7
2,604,673	-		HGI48_RS11925	0.82	-0.6
2,604,673	-		HGI48_RS11925	0.82	+0.3
2,604,673	-		HGI48_RS11925	0.82	-1.9
2,604,673	-		HGI48_RS11925	0.82	-0.9
2,604,682	-		HGI48_RS11925	0.83	-0.5
2,604,740	-		HGI48_RS11925	0.87	-0.5
2,604,743	+		HGI48_RS11925	0.87	-0.3
2,604,744	-		HGI48_RS11925	0.87	+0.7
2,604,744	-		HGI48_RS11925	0.87	-0.2
2,604,786	+				-0.1
2,604,931	+				-0.2
2,605,000	+				-0.4
2,605,017	-				+0.2
2,605,017	-				-1.5
2,605,035	+				-0.6
2,605,036	-				-0.2
2,605,126	+		HGI48_RS11930	0.20	-0.3
2,605,126	+		HGI48_RS11930	0.20	-0.3
2,605,126	+		HGI48_RS11930	0.20	-2.2
2,605,126	+		HGI48_RS11930	0.20	-0.6
2,605,127	-		HGI48_RS11930	0.20	-1.9
2,605,127	-		HGI48_RS11930	0.20	-2.2
2,605,127	-				+2.4
2,605,129	-		HGI48_RS11930	0.20	-0.6
2,605,129	-		HGI48_RS11930	0.20	+0.1
2,605,129	-		HGI48_RS11930	0.20	+0.4
2,605,129	-		HGI48_RS11930	0.20	+0.1
2,605,129	-		HGI48_RS11930	0.20	-0.3
2,605,129	-		HGI48_RS11930	0.20	-0.5
2,605,150	-		HGI48_RS11930	0.25	-0.5
2,605,187	+		HGI48_RS11930	0.34	+0.6
2,605,262	+		HGI48_RS11930	0.50	+1.1
2,605,262	+				-1.5
2,605,279	+		HGI48_RS11930	0.54	-1.2
2,605,279	+		HGI48_RS11930	0.54	+0.1
2,605,279	+		HGI48_RS11930	0.54	-1.5
2,605,279	+		HGI48_RS11930	0.54	+0.8
2,605,280	-				+0.5
2,605,280	-		HGI48_RS11930	0.55	+0.1
2,605,280	-		HGI48_RS11930	0.55	+0.1
2,605,311	+		HGI48_RS11930	0.61	+0.8
2,605,311	+		HGI48_RS11930	0.61	-0.1
2,605,312	-		HGI48_RS11930	0.62	+0.4
2,605,445	-				-3.2
2,605,460	-				+0.6
2,605,475	+				+0.8
2,605,555	+				-0.1
2,605,576	+				-0.5
2,605,576	+				-0.3
2,605,600	+				-1.1
2,605,600	+				+0.2
2,605,716	+		HGI48_RS11935	0.13	-0.7
2,605,734	+				+0.5
2,605,735	-		HGI48_RS11935	0.15	+0.3
2,605,735	-		HGI48_RS11935	0.15	-0.5
2,605,740	+				-1.5
2,605,740	+				+1.7
2,605,740	+		HGI48_RS11935	0.15	-1.5
2,605,741	-		HGI48_RS11935	0.15	-1.9
2,605,800	-		HGI48_RS11935	0.22	-1.8
2,605,819	+		HGI48_RS11935	0.24	-0.3
2,605,820	-		HGI48_RS11935	0.24	+0.3