Strain Fitness in Dickeya dianthicola 67-19 around HGI48_RS11615

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
2,535,800	+				-0.1
2,535,971	+				-0.5
2,535,971	+				+2.1
2,535,971	+				+0.2
2,535,971	+				+1.3
2,535,971	+				-2.5
2,536,565	+				+0.8
2,536,567	+				+0.6
2,536,568	-				-1.2
2,536,568	-				-1.3
2,536,599	+				+1.6
2,536,600	-				-0.1
2,536,633	+				-1.3
2,536,692	+				+0.9
2,536,693	-				-0.2
2,536,762	-				-1.5
2,536,812	-		HGI48_RS11615	0.10	+1.6
2,536,819	+		HGI48_RS11615	0.10	-0.6
2,536,820	-		HGI48_RS11615	0.10	-0.5
2,536,820	-		HGI48_RS11615	0.10	-0.8
2,536,909	+		HGI48_RS11615	0.16	-0.7
2,536,933	+		HGI48_RS11615	0.17	-0.8
2,536,934	-		HGI48_RS11615	0.17	+1.1
2,536,934	-		HGI48_RS11615	0.17	+0.1
2,536,934	-		HGI48_RS11615	0.17	-1.6
2,536,934	-		HGI48_RS11615	0.17	-0.7
2,537,035	+		HGI48_RS11615	0.23	-0.5
2,537,062	+				-1.5
2,537,062	+		HGI48_RS11615	0.25	+0.1
2,537,062	+		HGI48_RS11615	0.25	-0.8
2,537,062	+		HGI48_RS11615	0.25	-0.9
2,537,062	+		HGI48_RS11615	0.25	-0.9
2,537,062	+		HGI48_RS11615	0.25	-0.0
2,537,063	-		HGI48_RS11615	0.25	-0.7
2,537,063	-		HGI48_RS11615	0.25	+0.5
2,537,063	-		HGI48_RS11615	0.25	-0.7
2,537,063	-		HGI48_RS11615	0.25	-0.7
2,537,065	+		HGI48_RS11615	0.25	-1.2
2,537,065	+		HGI48_RS11615	0.25	+0.6
2,537,065	+		HGI48_RS11615	0.25	-0.1
2,537,065	+		HGI48_RS11615	0.25	-1.7
2,537,065	+		HGI48_RS11615	0.25	-3.1
2,537,065	+		HGI48_RS11615	0.25	-0.1
2,537,066	-		HGI48_RS11615	0.25	+0.6
2,537,066	-		HGI48_RS11615	0.25	-0.2
2,537,066	-		HGI48_RS11615	0.25	-0.3
2,537,164	+		HGI48_RS11615	0.31	-1.5
2,537,275	+				-0.9
2,537,275	+		HGI48_RS11615	0.38	+0.0
2,537,275	+		HGI48_RS11615	0.38	+1.2
2,537,275	+		HGI48_RS11615	0.38	+0.9
2,537,275	+		HGI48_RS11615	0.38	-0.8
2,537,276	-		HGI48_RS11615	0.38	+0.2
2,537,279	+		HGI48_RS11615	0.38	-2.3
2,537,279	+		HGI48_RS11615	0.38	+1.2
2,537,279	+		HGI48_RS11615	0.38	+0.1
2,537,417	+		HGI48_RS11615	0.46	+1.0
2,537,418	-		HGI48_RS11615	0.46	-1.1
2,537,418	-		HGI48_RS11615	0.46	-0.9
2,537,418	-		HGI48_RS11615	0.46	-1.5
2,537,440	+		HGI48_RS11615	0.47	-0.2
2,537,441	-		HGI48_RS11615	0.48	-0.9
2,537,446	+		HGI48_RS11615	0.48	+0.3
2,537,447	-		HGI48_RS11615	0.48	-0.7
2,537,544	-		HGI48_RS11615	0.54	-1.4
2,537,744	+		HGI48_RS11615	0.66	+0.6
2,537,745	-				+1.6
2,537,745	-				+1.1
2,537,844	-		HGI48_RS11615	0.72	+0.1
2,537,941	+		HGI48_RS11615	0.77	+0.1
2,537,941	+		HGI48_RS11615	0.77	-0.7
2,537,941	+		HGI48_RS11615	0.77	+0.3
2,537,942	-		HGI48_RS11615	0.77	-0.5
2,537,956	+		HGI48_RS11615	0.78	-0.2
2,537,956	+		HGI48_RS11615	0.78	-0.2
2,537,956	+		HGI48_RS11615	0.78	-0.2
2,537,956	+		HGI48_RS11615	0.78	-0.6
2,537,957	-		HGI48_RS11615	0.78	-0.9
2,537,957	-		HGI48_RS11615	0.78	+0.1
2,537,957	-		HGI48_RS11615	0.78	-0.2
2,537,976	+		HGI48_RS11615	0.79	-0.4
2,537,976	+		HGI48_RS11615	0.79	-0.9
2,537,976	+		HGI48_RS11615	0.79	-2.3
2,537,976	+		HGI48_RS11615	0.79	-0.3
2,537,977	-		HGI48_RS11615	0.79	-0.7
2,537,977	-		HGI48_RS11615	0.79	-0.1
2,537,977	-				-0.5
2,538,062	+		HGI48_RS11615	0.85	-0.5
2,538,063	-		HGI48_RS11615	0.85	-0.2
2,538,063	-		HGI48_RS11615	0.85	-0.1
2,538,335	+				+0.1
2,538,335	+				+1.1
2,538,336	-				-1.5
2,538,336	-				+1.0
2,538,338	+				-0.5
2,538,344	+				-1.3
2,538,344	+				+0.1
2,538,344	+				+0.1
2,538,344	+				-0.9
2,538,344	+				-0.5
2,538,345	-				+0.6
2,538,345	-				-2.3
2,538,384	+				+1.3
2,538,388	-				+0.3
2,538,418	+				-1.2
2,538,418	+				-0.1
2,538,419	-				-1.5
2,538,419	-				-0.3
2,538,526	-				-0.9
2,538,584	+				-1.5
2,538,602	+				+1.2
2,538,659	-				+1.3
2,538,670	+				-1.0
2,538,670	+				+0.3
2,538,670	+				-1.9
2,538,670	+				-0.5
2,538,671	-				-0.9
2,538,671	-				+0.4
2,538,683	+				+0.1
2,538,798	-		HGI48_RS11620	0.16	-0.2
2,538,850	+		HGI48_RS11620	0.29	-0.4
2,538,851	-		HGI48_RS11620	0.30	-0.9
2,538,851	-		HGI48_RS11620	0.30	+0.3
2,538,918	-		HGI48_RS11620	0.46	+0.1
2,538,918	-		HGI48_RS11620	0.46	-1.1
2,538,918	-		HGI48_RS11620	0.46	-0.2
2,538,998	+		HGI48_RS11620	0.67	+0.4
2,538,999	-		HGI48_RS11620	0.67	-1.1
2,538,999	-		HGI48_RS11620	0.67	+0.1
2,538,999	-		HGI48_RS11620	0.67	+0.5
2,538,999	-		HGI48_RS11620	0.67	+0.5
2,539,000	+		HGI48_RS11620	0.67	+0.4
2,539,001	-		HGI48_RS11620	0.67	-0.5
2,539,001	-		HGI48_RS11620	0.67	+0.9
2,539,127	+				-0.3
2,539,128	-				-0.5