Strain Fitness in Dickeya dianthicola 67-19 around HGI48_RS11120

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
2,419,241	-		HGI48_RS11115	0.85	-2.7
2,419,241	-		HGI48_RS11115	0.85	+0.3
2,419,257	+		HGI48_RS11115	0.85	+1.3
2,419,257	+				-1.5
2,419,257	+		HGI48_RS11115	0.85	-2.2
2,419,258	-		HGI48_RS11115	0.85	-1.5
2,419,258	-		HGI48_RS11115	0.85	-2.2
2,419,349	+		HGI48_RS11115	0.87	-1.3
2,419,349	+		HGI48_RS11115	0.87	+0.5
2,419,350	-		HGI48_RS11115	0.87	-0.2
2,419,411	+		HGI48_RS11115	0.89	+0.7
2,419,412	-		HGI48_RS11115	0.89	-0.0
2,419,421	+		HGI48_RS11115	0.89	+0.4
2,419,422	-		HGI48_RS11115	0.89	-0.4
2,419,533	-				-0.1
2,419,598	+				+0.6
2,419,598	+				+1.1
2,419,602	+				-0.7
2,419,602	+				-0.9
2,419,602	+				+0.1
2,419,603	-				+0.1
2,419,655	+				+1.1
2,419,656	-				-0.0
2,419,656	-				-0.3
2,419,736	+				-0.3
2,419,749	-				+0.7
2,419,997	+				-0.6
2,419,997	+				+0.4
2,419,997	+				-0.2
2,419,998	-				-0.2
2,419,998	-				-0.3
2,420,013	+				-1.5
2,420,013	+				-1.8
2,420,014	-				+0.1
2,420,020	+				-1.9
2,420,193	-				+0.1
2,420,193	-				-0.4
2,420,193	-				+1.4
2,420,219	+				-0.2
2,420,219	+				+0.4
2,421,161	+		HGI48_RS11120	0.90	-0.3
2,421,291	+				-1.1
2,421,291	+				+0.0
2,421,292	-				+0.0
2,421,292	-				+0.2
2,421,292	-				-0.7
2,421,332	+				-0.1
2,421,332	+				-0.5
2,421,333	-				+0.3
2,421,400	+				-0.3
2,421,400	+				-2.1
2,421,400	+				-1.1
2,421,400	+				-2.2
2,421,401	-				+0.1
2,421,416	-				-0.4
2,421,416	-				-0.1
2,421,416	-				-2.7
2,421,418	+				-0.5
2,421,418	+				-1.0
2,421,418	+				-1.4
2,421,418	+				-0.1
2,421,419	-				-0.1
2,421,419	-				+0.3
2,421,419	-				-0.9
2,421,419	-				+0.8
2,421,419	-				-0.2
2,421,419	-				-0.8
2,421,481	+				-0.4
2,421,523	+				-0.5
2,421,524	-				-1.9
2,421,544	+				+0.8
2,421,544	+				+0.5
2,421,545	-				+1.3
2,421,545	-				-0.2
2,421,549	+				-0.3
2,421,549	+				+0.8
2,421,616	+		HGI48_RS11125	0.12	-0.5
2,421,616	+		HGI48_RS11125	0.12	-0.9
2,421,617	-		HGI48_RS11125	0.12	+0.1
2,421,801	+		HGI48_RS11125	0.22	-0.9
2,421,801	+		HGI48_RS11125	0.22	+0.1
2,421,801	+		HGI48_RS11125	0.22	-0.2
2,421,802	-		HGI48_RS11125	0.22	+0.4
2,421,802	-		HGI48_RS11125	0.22	+1.4
2,421,802	-		HGI48_RS11125	0.22	-0.3
2,421,802	-		HGI48_RS11125	0.22	-0.7
2,421,802	-		HGI48_RS11125	0.22	+0.1
2,421,802	-		HGI48_RS11125	0.22	-1.9
2,421,901	+		HGI48_RS11125	0.28	+0.1
2,421,901	+		HGI48_RS11125	0.28	+0.1
2,422,040	-		HGI48_RS11125	0.35	-1.2
2,422,040	-		HGI48_RS11125	0.35	+1.0
2,422,040	-				+1.5
2,422,040	-		HGI48_RS11125	0.35	-0.7
2,422,171	+		HGI48_RS11125	0.42	+0.9
2,422,171	+		HGI48_RS11125	0.42	+0.5
2,422,171	+		HGI48_RS11125	0.42	-1.5
2,422,172	-		HGI48_RS11125	0.42	-1.8
2,422,172	-		HGI48_RS11125	0.42	+0.4
2,422,172	-		HGI48_RS11125	0.42	+0.2
2,422,240	-		HGI48_RS11125	0.46	+1.3