Strain Fitness in Dickeya dianthicola 67-19 around HGI48_RS10850

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
2,350,556	+				+1.5
2,350,557	-		HGI48_RS10840	0.88	+0.1
2,350,557	-		HGI48_RS10840	0.88	-1.9
2,350,567	+				-0.5
2,350,643	+				-1.1
2,350,643	+				-0.4
2,350,644	-				-0.2
2,350,663	-				-0.0
2,351,148	+		HGI48_RS10845	0.57	+0.3
2,351,323	-		HGI48_RS10845	0.77	+0.4
2,351,567	+				-0.8
2,351,568	-				-0.9
2,351,570	+				-1.3
2,351,570	+				-0.7
2,351,706	+		HGI48_RS10850	0.18	-0.9
2,351,706	+				-0.5
2,351,765	+		HGI48_RS10850	0.23	-0.3
2,351,877	+		HGI48_RS10850	0.34	+0.1
2,351,877	+		HGI48_RS10850	0.34	+0.5
2,351,877	+		HGI48_RS10850	0.34	-1.0
2,351,878	-		HGI48_RS10850	0.34	-0.8
2,351,878	-				+2.4
2,351,930	+		HGI48_RS10850	0.39	+0.1
2,351,930	+		HGI48_RS10850	0.39	+0.1
2,351,931	-		HGI48_RS10850	0.39	-1.7
2,352,029	+		HGI48_RS10850	0.48	-0.2
2,352,029	+		HGI48_RS10850	0.48	-1.9
2,352,029	+		HGI48_RS10850	0.48	-2.2
2,352,029	+		HGI48_RS10850	0.48	+0.1
2,352,030	-		HGI48_RS10850	0.48	-0.9
2,352,030	-		HGI48_RS10850	0.48	+0.1
2,352,051	+		HGI48_RS10850	0.50	-1.1
2,352,052	-		HGI48_RS10850	0.50	-0.0
2,352,344	+		HGI48_RS10850	0.77	-0.1
2,352,344	+		HGI48_RS10850	0.77	-0.0
2,352,345	-		HGI48_RS10850	0.77	-1.9
2,352,345	-		HGI48_RS10850	0.77	-0.2
2,352,451	-		HGI48_RS10850	0.87	+1.2
2,352,457	+		HGI48_RS10850	0.87	-1.0
2,352,457	+		HGI48_RS10850	0.87	-1.2
2,352,458	-		HGI48_RS10850	0.87	-0.1
2,352,588	+				+0.1
2,352,589	-				-0.7
2,352,595	+				+1.1
2,352,595	+				+0.4
2,352,595	+				-0.1
2,352,595	+				-0.5
2,352,596	-				-1.4
2,352,596	-				+0.1
2,352,596	-				-0.1
2,352,651	-				-0.9
2,352,662	+				-0.6
2,352,692	+				-2.2
2,352,745	+				+1.1
2,352,750	-				-1.7
2,352,776	+				+0.4
2,352,801	+				-0.6
2,352,900	+				-0.2
2,352,901	-				-0.1
2,352,908	+				-0.0
2,352,909	-				+0.5
2,352,909	-				-2.9
2,352,909	-				-0.2
2,352,966	+				+0.4
2,352,966	+				-0.3
2,352,966	+				-1.1
2,352,967	-				-0.8
2,353,015	+				+0.1
2,353,036	+				-0.9
2,353,036	+				-0.2
2,353,036	+				+0.3
2,353,037	-				+0.6
2,353,037	-				+0.3
2,353,087	-		HGI48_RS10855	0.12	-1.2
2,353,142	-		HGI48_RS10855	0.17	-2.5
2,353,147	-		HGI48_RS10855	0.17	-0.1
2,353,222	+		HGI48_RS10855	0.24	-1.0
2,353,222	+		HGI48_RS10855	0.24	-1.2
2,353,222	+		HGI48_RS10855	0.24	+0.0
2,353,223	-		HGI48_RS10855	0.24	+0.1
2,353,223	-		HGI48_RS10855	0.24	-1.5
2,353,266	+		HGI48_RS10855	0.28	-0.2
2,353,266	+		HGI48_RS10855	0.28	+0.1
2,353,266	+		HGI48_RS10855	0.28	+1.1
2,353,267	-		HGI48_RS10855	0.28	+0.7
2,353,267	-				-0.9
2,353,267	-		HGI48_RS10855	0.28	-0.3
2,353,358	+		HGI48_RS10855	0.36	-0.0
2,353,359	-				-1.5
2,353,363	+				+1.5
2,353,364	-		HGI48_RS10855	0.36	+1.3