Strain Fitness in Dickeya dianthicola 67-19 around HGI48_RS10845

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
2,349,949	+		HGI48_RS10840	0.15	+0.1
2,349,949	+		HGI48_RS10840	0.15	+0.1
2,349,949	+		HGI48_RS10840	0.15	-0.9
2,349,949	+		HGI48_RS10840	0.15	+0.3
2,349,950	-		HGI48_RS10840	0.15	-0.3
2,349,950	-		HGI48_RS10840	0.15	-0.1
2,349,960	+		HGI48_RS10840	0.16	-0.1
2,349,961	-		HGI48_RS10840	0.16	+0.4
2,349,966	+		HGI48_RS10840	0.17	-0.2
2,349,989	-		HGI48_RS10840	0.20	-0.9
2,350,011	+		HGI48_RS10840	0.22	-0.8
2,350,011	+		HGI48_RS10840	0.22	-1.7
2,350,012	-		HGI48_RS10840	0.23	-2.5
2,350,197	+		HGI48_RS10840	0.45	-1.2
2,350,248	+		HGI48_RS10840	0.51	-0.9
2,350,248	+		HGI48_RS10840	0.51	-0.5
2,350,249	-		HGI48_RS10840	0.51	+0.6
2,350,249	-				+1.1
2,350,432	-		HGI48_RS10840	0.73	+1.6
2,350,472	+		HGI48_RS10840	0.78	+0.2
2,350,472	+		HGI48_RS10840	0.78	-0.2
2,350,473	-		HGI48_RS10840	0.78	+0.9
2,350,556	+				+1.5
2,350,557	-		HGI48_RS10840	0.88	+0.1
2,350,557	-		HGI48_RS10840	0.88	-1.9
2,350,567	+				-0.5
2,350,643	+				-1.1
2,350,643	+				-0.4
2,350,644	-				-0.2
2,350,663	-				-0.0
2,351,148	+		HGI48_RS10845	0.57	+0.3
2,351,323	-		HGI48_RS10845	0.77	+0.4
2,351,567	+				-0.8
2,351,568	-				-0.9
2,351,570	+				-1.3
2,351,570	+				-0.7
2,351,706	+		HGI48_RS10850	0.18	-0.9
2,351,706	+				-0.5
2,351,765	+		HGI48_RS10850	0.23	-0.3
2,351,877	+		HGI48_RS10850	0.34	+0.1
2,351,877	+		HGI48_RS10850	0.34	+0.5
2,351,877	+		HGI48_RS10850	0.34	-1.0
2,351,878	-		HGI48_RS10850	0.34	-0.8
2,351,878	-				+2.4
2,351,930	+		HGI48_RS10850	0.39	+0.1
2,351,930	+		HGI48_RS10850	0.39	+0.1
2,351,931	-		HGI48_RS10850	0.39	-1.7
2,352,029	+		HGI48_RS10850	0.48	-0.2
2,352,029	+		HGI48_RS10850	0.48	-1.9
2,352,029	+		HGI48_RS10850	0.48	-2.2
2,352,029	+		HGI48_RS10850	0.48	+0.1
2,352,030	-		HGI48_RS10850	0.48	-0.9
2,352,030	-		HGI48_RS10850	0.48	+0.1
2,352,051	+		HGI48_RS10850	0.50	-1.1
2,352,052	-		HGI48_RS10850	0.50	-0.0
2,352,344	+		HGI48_RS10850	0.77	-0.1
2,352,344	+		HGI48_RS10850	0.77	-0.0
2,352,345	-		HGI48_RS10850	0.77	-1.9
2,352,345	-		HGI48_RS10850	0.77	-0.2
2,352,451	-		HGI48_RS10850	0.87	+1.2
2,352,457	+		HGI48_RS10850	0.87	-1.0
2,352,457	+		HGI48_RS10850	0.87	-1.2
2,352,458	-		HGI48_RS10850	0.87	-0.1