Strain Fitness in Dickeya dianthicola 67-19 around HGI48_RS10705

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
2,311,662	-		HGI48_RS10700	0.17	-0.3
2,311,675	+		HGI48_RS10700	0.19	+0.1
2,311,676	-		HGI48_RS10700	0.19	-0.2
2,311,745	+		HGI48_RS10700	0.27	+0.6
2,311,760	+		HGI48_RS10700	0.29	-0.3
2,311,861	-				+1.1
2,312,043	+		HGI48_RS10700	0.63	+0.8
2,312,044	-		HGI48_RS10700	0.63	-0.2
2,312,057	+		HGI48_RS10700	0.65	+0.9
2,312,123	+				-1.5
2,312,282	+				-0.2
2,312,282	+				-1.9
2,312,282	+				+0.3
2,312,283	-				+0.1
2,312,283	-				-1.1
2,312,283	-				-0.7
2,312,283	-				+1.8
2,312,384	-				+0.3
2,312,493	-				+0.3
2,312,499	-				-0.3
2,312,504	+				+0.8
2,312,504	+				-1.4
2,312,504	+				+1.4
2,312,504	+				+0.5
2,312,504	+				-0.1
2,312,505	-				-3.2
2,312,505	-				+0.8
2,312,505	-				-0.8
2,312,505	-				+0.6
2,312,561	+				-0.5
2,312,563	+				+0.0
2,312,563	+				+1.9
2,312,780	+		HGI48_RS10705	0.84	-0.5
2,312,780	+		HGI48_RS10705	0.84	-0.5
2,312,780	+		HGI48_RS10705	0.84	-0.6
2,312,780	+		HGI48_RS10705	0.84	+0.7
2,312,780	+		HGI48_RS10705	0.84	+0.4
2,312,781	-		HGI48_RS10705	0.84	-0.7
2,312,781	-		HGI48_RS10705	0.84	-0.5
2,312,790	-		HGI48_RS10705	0.88	-0.3
2,312,815	+				-1.2
2,312,815	+				-0.2
2,312,816	-				-0.3
2,312,835	-				-0.2
2,312,849	+				+0.1
2,312,958	-				-1.0
2,312,958	-				+0.3
2,312,993	-				-0.2
2,312,998	+				-0.5
2,312,998	+				-1.9
2,312,998	+				+1.5
2,312,999	-				+1.2
2,313,006	-				+0.1
2,313,031	+				-2.2
2,313,032	-				-0.2
2,313,033	+				-2.5
2,313,034	-				+0.2
2,313,067	+				+0.5
2,313,141	+				-1.5
2,313,142	-				+0.2
2,313,194	-				-0.4
2,313,194	-				+0.8
2,313,199	+				-0.9
2,313,199	+				-0.7
2,313,199	+				-0.4
2,313,199	+				+0.1
2,313,223	+				-0.2
2,313,413	+		HGI48_RS10710	0.15	-0.2
2,313,413	+		HGI48_RS10710	0.15	-1.3
2,313,413	+		HGI48_RS10710	0.15	+0.6
2,313,413	+				+0.5
2,313,414	-		HGI48_RS10710	0.15	-0.5
2,313,429	-				+0.7
2,313,432	+		HGI48_RS10710	0.17	-0.1
2,313,433	-		HGI48_RS10710	0.17	-0.2
2,313,433	-		HGI48_RS10710	0.17	+0.3
2,313,536	-		HGI48_RS10710	0.26	-1.5
2,313,592	-		HGI48_RS10710	0.31	-0.3
2,313,685	+		HGI48_RS10710	0.39	-0.3
2,313,686	-		HGI48_RS10710	0.39	-1.2
2,313,686	-		HGI48_RS10710	0.39	-0.1
2,313,691	-		HGI48_RS10710	0.39	-0.2
2,313,748	+		HGI48_RS10710	0.44	+0.1