Strain Fitness in Dickeya dianthicola 67-19 around HGI48_RS10070

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
2,173,617	-		HGI48_RS10065	0.38	+0.6
2,173,724	-		HGI48_RS10065	0.49	+0.2
2,173,863	+		HGI48_RS10065	0.64	+0.6
2,173,925	+		HGI48_RS10065	0.70	-0.6
2,173,925	+		HGI48_RS10065	0.70	+0.0
2,174,110	+		HGI48_RS10065	0.89	-0.3
2,174,110	+		HGI48_RS10065	0.89	-0.4
2,174,110	+		HGI48_RS10065	0.89	-1.1
2,174,154	+				+0.4
2,174,255	+				-0.5
2,174,256	-				+1.4
2,174,256	-				-1.6
2,174,652	-				+2.1
2,174,687	+				+1.1
2,174,687	+		HGI48_RS10070	0.64	-0.2
2,174,688	-		HGI48_RS10070	0.64	-2.1
2,174,829	-		HGI48_RS10070	0.83	-0.9
2,174,829	-		HGI48_RS10070	0.83	-0.1
2,174,829	-				+0.9
2,174,955	-				+1.3
2,174,955	-				+0.9
2,174,970	+				-1.7
2,174,970	+				+0.6
2,174,971	-				-0.0
2,174,996	-				+2.1
2,175,019	+				+0.2
2,175,020	-				-0.1
2,175,020	-				-0.1
2,175,020	-				-0.9
2,175,035	+				-0.2
2,175,111	+				-0.1
2,175,111	+				-1.9
2,175,112	-				-1.9
2,175,112	-				-0.4
2,175,112	-				+0.6
2,175,115	-				-0.9
2,175,150	+				+0.1
2,175,150	+		HGI48_RS10075	0.18	-1.0
2,175,150	+		HGI48_RS10075	0.18	-0.6
2,175,150	+		HGI48_RS10075	0.18	-0.6
2,175,150	+		HGI48_RS10075	0.18	-1.5
2,175,150	+		HGI48_RS10075	0.18	-1.2
2,175,150	+				-0.4
2,175,150	+		HGI48_RS10075	0.18	-0.9
2,175,151	-		HGI48_RS10075	0.19	-2.7
2,175,151	-				+0.9
2,175,151	-				-0.9
2,175,151	-		HGI48_RS10075	0.19	-0.2
2,175,151	-		HGI48_RS10075	0.19	-0.5
2,175,151	-		HGI48_RS10075	0.19	-1.4
2,175,151	-		HGI48_RS10075	0.19	-0.5
2,175,151	-		HGI48_RS10075	0.19	-1.2
2,175,151	-		HGI48_RS10075	0.19	-1.1
2,175,154	+		HGI48_RS10075	0.19	+0.1
2,175,154	+		HGI48_RS10075	0.19	-1.2
2,175,155	-				-0.9
2,175,204	+		HGI48_RS10075	0.32	-0.4
2,175,207	+		HGI48_RS10075	0.33	-0.5
2,175,207	+		HGI48_RS10075	0.33	-0.9
2,175,208	-		HGI48_RS10075	0.33	+0.5
2,175,315	+		HGI48_RS10075	0.60	-1.3
2,175,315	+		HGI48_RS10075	0.60	-1.7
2,175,315	+		HGI48_RS10075	0.60	-2.9
2,175,315	+		HGI48_RS10075	0.60	-2.3
2,175,315	+		HGI48_RS10075	0.60	-1.7
2,175,315	+		HGI48_RS10075	0.60	-1.4
2,175,316	-		HGI48_RS10075	0.60	-1.2
2,175,316	-		HGI48_RS10075	0.60	-2.1
2,175,316	-		HGI48_RS10075	0.60	-0.6
2,175,316	-				+0.1
2,175,456	+				-1.4
2,175,456	+				-0.9
2,175,456	+				-1.4
2,175,467	+				-2.2
2,175,467	+				-2.0
2,175,514	+				-0.5
2,175,514	+				-1.3
2,175,534	+				+0.8
2,175,534	+				+0.0
2,175,534	+				-1.7
2,175,534	+				-0.2
2,175,534	+				-2.2
2,175,535	-				+0.1
2,175,535	-				-1.4
2,175,545	+				-0.8
2,175,545	+				-1.3
2,175,546	-				-0.4
2,175,550	+				+1.1
2,175,578	-				-0.9
2,175,581	-				-0.2
2,175,581	-				+2.1
2,175,644	-				-0.6
2,175,759	-				+1.7
2,175,764	+		HGI48_RS10080	0.15	+0.3
2,175,772	+		HGI48_RS10080	0.16	+0.5
2,175,773	-				-0.9
2,175,834	-		HGI48_RS10080	0.24	-0.7