Strain Fitness in Dickeya dianthicola 67-19 around HGI48_RS09910

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
2,143,648	-		HGI48_RS09905	0.32	-0.6
2,143,698	+		HGI48_RS09905	0.36	+0.3
2,143,739	+		HGI48_RS09905	0.39	-1.1
2,143,740	-				+0.1
2,143,743	-		HGI48_RS09905	0.40	-2.4
2,144,039	-		HGI48_RS09905	0.62	-1.1
2,144,093	-		HGI48_RS09905	0.66	+0.7
2,144,104	+		HGI48_RS09905	0.67	-1.2
2,144,144	+		HGI48_RS09905	0.70	-0.3
2,144,144	+		HGI48_RS09905	0.70	+0.5
2,144,144	+		HGI48_RS09905	0.70	-0.1
2,144,144	+		HGI48_RS09905	0.70	+0.1
2,144,144	+		HGI48_RS09905	0.70	-0.2
2,144,144	+				+0.1
2,144,145	-		HGI48_RS09905	0.70	-0.7
2,144,145	-		HGI48_RS09905	0.70	-1.4
2,144,145	-		HGI48_RS09905	0.70	+0.3
2,144,174	+		HGI48_RS09905	0.73	-0.0
2,144,254	+		HGI48_RS09905	0.79	-1.6
2,144,255	-		HGI48_RS09905	0.79	-0.3
2,144,310	-		HGI48_RS09905	0.83	-1.2
2,144,310	-		HGI48_RS09905	0.83	+1.0
2,144,317	+		HGI48_RS09905	0.83	-0.6
2,144,317	+				+1.1
2,144,324	+		HGI48_RS09905	0.84	-0.6
2,144,324	+		HGI48_RS09905	0.84	-1.2
2,144,453	+				+1.1
2,144,454	-				-2.2
2,144,455	+				-0.3
2,144,488	-				+0.1
2,144,488	-				+0.1
2,144,498	-				+0.1
2,144,498	-				-0.2
2,144,532	-				+0.0
2,144,581	-				+1.4
2,144,635	+				-1.4
2,144,677	-				-0.9
2,144,677	-				+1.9
2,144,677	-				+0.0
2,144,743	+				+0.9
2,144,744	-		HGI48_RS09910	0.11	-0.3
2,144,781	-		HGI48_RS09910	0.14	-0.3
2,144,781	-		HGI48_RS09910	0.14	-0.1
2,144,807	+		HGI48_RS09910	0.17	-1.4
2,144,811	+		HGI48_RS09910	0.17	+0.5
2,144,825	+		HGI48_RS09910	0.18	-0.3
2,144,825	+		HGI48_RS09910	0.18	-0.1
2,144,826	-				+1.1
2,144,826	-		HGI48_RS09910	0.18	-2.4
2,144,826	-		HGI48_RS09910	0.18	-0.3
2,144,910	-		HGI48_RS09910	0.27	-0.3
2,144,910	-		HGI48_RS09910	0.27	+0.1
2,144,961	+		HGI48_RS09910	0.32	-0.1
2,144,962	-		HGI48_RS09910	0.32	-1.3
2,144,962	-		HGI48_RS09910	0.32	-1.9
2,144,962	-		HGI48_RS09910	0.32	-1.3
2,145,021	-				-1.4
2,145,021	-		HGI48_RS09910	0.37	-0.0
2,145,021	-		HGI48_RS09910	0.37	-1.2
2,145,026	+		HGI48_RS09910	0.38	+0.4
2,145,026	+				-1.4
2,145,045	-				+1.7
2,145,045	-		HGI48_RS09910	0.40	-0.3
2,145,045	-		HGI48_RS09910	0.40	-0.8
2,145,092	+		HGI48_RS09910	0.44	-0.9
2,145,130	+		HGI48_RS09910	0.48	+0.8
2,145,155	-		HGI48_RS09910	0.50	+0.7
2,145,165	-		HGI48_RS09910	0.51	-1.3
2,145,291	-		HGI48_RS09910	0.63	-0.2
2,145,377	+		HGI48_RS09910	0.72	-0.9
2,145,378	-		HGI48_RS09910	0.72	-2.2
2,145,408	-		HGI48_RS09910	0.75	-0.2
2,145,408	-		HGI48_RS09910	0.75	+0.8
2,145,449	+		HGI48_RS09910	0.79	+1.3
2,145,450	-		HGI48_RS09910	0.79	-0.5
2,145,450	-		HGI48_RS09910	0.79	-0.2
2,145,519	-		HGI48_RS09910	0.85	+0.1
2,145,519	-		HGI48_RS09910	0.85	+0.4
2,145,536	+		HGI48_RS09910	0.87	-0.9
2,145,621	+				-0.6
2,145,621	+				-1.1
2,145,633	+				+0.5
2,145,738	-				+0.7
2,145,850	+				+0.5
2,145,917	-				-0.4
2,145,917	-				-0.4
2,145,936	-				-1.2
2,145,948	-				-1.2
2,145,948	-				+0.1
2,145,948	-				+0.7
2,146,044	+				-0.9
2,146,044	+				+0.1
2,146,044	+				-0.1
2,146,044	+				-0.2
2,146,044	+				-1.2
2,146,044	+				+0.9
2,146,044	+				+1.0
2,146,044	+				-0.4
2,146,044	+				-1.4
2,146,044	+				-2.2
2,146,045	-				-0.2
2,146,045	-				+1.1
2,146,045	-				+0.1
2,146,045	-				-1.1
2,146,045	-				+0.6
2,146,045	-				-0.2
2,146,045	-				-0.9
2,146,045	-				-3.3
2,146,045	-				-0.2
2,146,045	-				-0.3
2,146,045	-				-2.7
2,146,045	-				-0.5
2,146,045	-				+0.4
2,146,077	+				-0.3
2,146,476	+		HGI48_RS09915	0.25	+0.1
2,146,476	+		HGI48_RS09915	0.25	+0.8
2,146,477	-		HGI48_RS09915	0.25	-1.3
2,146,477	-		HGI48_RS09915	0.25	+0.5