Strain Fitness in Dickeya dianthicola 67-19 around HGI48_RS09740
Experiment: LB
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | LB |
---|---|---|---|---|---|
remove | |||||
2,101,975 | + | HGI48_RS09735 | 0.21 | -1.4 | |
2,101,975 | + | HGI48_RS09735 | 0.21 | -0.9 | |
2,101,975 | + | +1.1 | |||
2,102,041 | - | HGI48_RS09735 | 0.27 | +0.6 | |
2,102,357 | + | HGI48_RS09735 | 0.57 | -1.9 | |
2,102,357 | + | HGI48_RS09735 | 0.57 | -0.4 | |
2,102,440 | + | +0.9 | |||
2,103,280 | + | HGI48_RS09740 | 0.42 | -0.5 | |
2,103,351 | + | HGI48_RS09740 | 0.49 | -0.5 | |
2,103,351 | + | HGI48_RS09740 | 0.49 | +0.6 | |
2,103,459 | + | HGI48_RS09740 | 0.59 | -1.4 | |
2,103,460 | - | HGI48_RS09740 | 0.59 | -2.7 | |
2,103,890 | - | -0.9 | |||
2,104,070 | + | +1.1 | |||
2,104,088 | + | HGI48_RS09745 | 0.14 | -0.9 | |
2,104,089 | - | HGI48_RS09745 | 0.15 | -0.4 | |
2,104,099 | + | HGI48_RS09745 | 0.15 | +0.1 | |
2,104,100 | - | HGI48_RS09745 | 0.15 | -1.4 | |
2,104,100 | - | HGI48_RS09745 | 0.15 | -2.9 | |
2,104,565 | + | +0.1 | |||
2,104,566 | - | HGI48_RS09745 | 0.51 | -0.6 | |
2,104,814 | + | HGI48_RS09745 | 0.70 | -1.2 | |
2,104,814 | + | HGI48_RS09745 | 0.70 | -0.4 | |
2,104,823 | - | HGI48_RS09745 | 0.71 | -2.7 | |
2,104,876 | + | +0.9 |
Or see this region's nucleotide sequence