Strain Fitness in Dickeya dianthicola 67-19 around HGI48_RS09300

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
1,996,932	+		HGI48_RS09295	0.86	-0.1
1,996,932	+		HGI48_RS09295	0.86	-3.3
1,996,933	-		HGI48_RS09295	0.86	-0.2
1,996,933	-		HGI48_RS09295	0.86	+0.3
1,996,933	-				-0.4
1,997,012	-				+1.3
1,997,101	+				+0.8
1,997,102	-				+0.8
1,997,124	-				+1.6
1,997,141	+				-1.2
1,997,141	+				+0.4
1,997,141	+				+0.2
1,997,141	+				-1.4
1,997,142	-				-0.3
1,997,142	-				-0.8
1,997,142	-				-0.1
1,997,142	-				-0.5
1,997,147	-				-0.4
1,997,260	+				+2.3
1,997,261	-				+0.5
1,997,293	+				+0.5
1,997,347	-				+1.5
1,997,427	-				+1.2
1,997,447	-				-1.0
1,997,519	+				-0.1
1,997,520	-				+1.2
1,997,520	-				+0.2
1,997,654	-				+0.0
1,997,841	-				-0.1
1,997,845	-				+1.1
1,997,847	+				-0.1
1,997,974	-		HGI48_RS09300	0.14	-0.1
1,998,057	+		HGI48_RS09300	0.22	-1.3
1,998,058	-		HGI48_RS09300	0.22	+0.2
1,998,122	+		HGI48_RS09300	0.28	-0.8
1,998,123	-		HGI48_RS09300	0.28	-0.6
1,998,318	+		HGI48_RS09300	0.47	-0.1
1,998,423	+		HGI48_RS09300	0.58	-0.6
1,998,432	+		HGI48_RS09300	0.58	-0.8
1,998,437	-		HGI48_RS09300	0.59	+0.7
1,998,503	-		HGI48_RS09300	0.65	-1.4
1,998,857	-				-0.9
1,998,866	+				-2.4
1,998,888	+				+1.2
1,998,985	+				-0.1
1,998,996	-				-1.2
1,998,996	-				-0.1
1,998,996	-				-1.4
1,999,070	+				+0.2
1,999,070	+				+0.8
1,999,098	-				+0.5
1,999,118	+				+0.3
1,999,158	+				+0.2
1,999,166	+				+1.2
1,999,167	-				-0.8
1,999,170	+				-0.7
1,999,170	+				+0.2
1,999,179	+		HGI48_RS09305	0.10	+1.9
1,999,242	+				+1.6
1,999,243	-		HGI48_RS09305	0.14	+0.3
1,999,482	+		HGI48_RS09305	0.28	+0.4
1,999,482	+		HGI48_RS09305	0.28	+0.2
1,999,794	+		HGI48_RS09305	0.46	-1.6
1,999,809	+		HGI48_RS09305	0.46	+0.0
1,999,823	+		HGI48_RS09305	0.47	+0.8