Strain Fitness in Dickeya dianthicola 67-19 around HGI48_RS09050

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
1,947,157	+		HGI48_RS09040	0.53	+0.4
1,947,157	+		HGI48_RS09040	0.53	+0.4
1,947,187	+		HGI48_RS09040	0.57	-1.0
1,947,313	+		HGI48_RS09040	0.72	-0.4
1,947,314	-		HGI48_RS09040	0.72	-0.1
1,947,336	-		HGI48_RS09040	0.75	-0.6
1,947,336	-		HGI48_RS09040	0.75	-0.0
1,947,389	+		HGI48_RS09040	0.82	+0.8
1,947,389	+		HGI48_RS09040	0.82	-0.4
1,947,390	-		HGI48_RS09040	0.82	-0.2
1,947,390	-		HGI48_RS09040	0.82	-0.6
1,947,390	-		HGI48_RS09040	0.82	-0.8
1,947,390	-		HGI48_RS09040	0.82	-0.7
1,947,408	+				+1.5
1,947,473	+				+0.8
1,947,481	+				+0.2
1,947,482	-				-1.1
1,947,514	-				+1.4
1,947,514	-				+0.8
1,947,514	-				-0.3
1,947,535	+				+0.5
1,947,560	-				-0.2
1,947,560	-				-1.4
1,947,560	-				-0.6
1,947,561	+				-0.6
1,947,613	+				+1.2
1,947,743	+				-1.4
1,947,745	+				+0.1
1,947,746	-				-0.5
1,947,746	-				+1.0
1,947,767	+				-0.5
1,947,767	+				+1.5
1,947,767	+				+0.5
1,947,768	-				-0.2
1,947,863	-				+0.8
1,947,883	+		HGI48_RS09045	0.42	+0.2
1,947,962	-		HGI48_RS09045	0.69	-0.4
1,947,964	+		HGI48_RS09045	0.69	-0.1
1,947,994	-		HGI48_RS09045	0.79	+0.1
1,948,014	-		HGI48_RS09045	0.86	+0.5
1,948,022	+		HGI48_RS09045	0.89	+1.0
1,948,023	-		HGI48_RS09045	0.89	-0.8
1,948,027	+				-0.0
1,948,052	+				-0.3
1,948,060	+				-0.6
1,948,066	+				+0.4
1,948,068	+				+1.0
1,948,123	+				+0.2
1,948,123	+				-0.3
1,948,124	-				-0.3
1,948,155	+		HGI48_RS09050	0.10	-0.0
1,948,156	-		HGI48_RS09050	0.10	+0.4
1,948,181	+		HGI48_RS09050	0.14	-0.4
1,948,182	-		HGI48_RS09050	0.14	+0.2
1,948,182	-		HGI48_RS09050	0.14	+0.6
1,948,300	-		HGI48_RS09050	0.31	+1.2
1,948,336	+		HGI48_RS09050	0.36	-0.4
1,948,336	+		HGI48_RS09050	0.36	+0.9
1,948,336	+		HGI48_RS09050	0.36	-0.6
1,948,337	-		HGI48_RS09050	0.36	-0.7
1,948,363	-				-1.4
1,948,406	-		HGI48_RS09050	0.46	+0.3
1,948,406	-		HGI48_RS09050	0.46	-0.1
1,948,406	-				+2.2
1,948,416	+		HGI48_RS09050	0.47	-0.1
1,948,416	+				+2.5
1,948,417	-				+0.6
1,948,511	+		HGI48_RS09050	0.61	-0.0
1,948,511	+		HGI48_RS09050	0.61	+0.1
1,948,511	+		HGI48_RS09050	0.61	-0.1
1,948,511	+				+0.8
1,948,512	-		HGI48_RS09050	0.61	-0.2
1,948,512	-		HGI48_RS09050	0.61	-0.3
1,948,512	-		HGI48_RS09050	0.61	-0.1
1,948,646	-		HGI48_RS09050	0.80	+0.6
1,948,769	+				+0.2
1,948,769	+				+0.4
1,948,769	+				+0.3
1,948,769	+				-0.5
1,948,769	+				-2.1
1,948,770	-				+1.4
1,948,770	-				-0.4
1,948,770	-				-0.7
1,948,787	+				-0.2
1,948,810	+				-0.8
1,948,816	+				-0.5
1,948,817	-				-1.4
1,948,817	-				-2.1
1,948,828	-				-0.2
1,948,828	-				-1.1
1,948,828	-				-0.3
1,948,834	+				+0.4
1,948,834	+				+0.2
1,948,834	+				-1.8
1,948,887	+				-2.1
1,948,887	+				+0.5
1,948,888	-				-1.4
1,948,888	-				-1.8
1,948,962	+				-0.3
1,948,962	+				+1.2
1,948,962	+				+0.2
1,948,962	+				-0.0
1,948,963	-				-0.6
1,948,977	+				+1.5
1,949,012	+				+0.2
1,949,013	-				+1.0
1,949,042	+				+0.2
1,949,042	+				+0.2
1,949,043	-				-1.8
1,949,047	+				-1.4
1,949,047	+				-0.5
1,949,047	+				-0.8
1,949,048	-				+0.5
1,949,069	-				-0.8
1,949,138	-		HGI48_RS09055	0.15	-0.6
1,949,178	+		HGI48_RS09055	0.29	+0.2
1,949,178	+		HGI48_RS09055	0.29	+0.6
1,949,179	-		HGI48_RS09055	0.29	-0.8
1,949,179	-		HGI48_RS09055	0.29	+0.0
1,949,180	+		HGI48_RS09055	0.30	+0.2
1,949,180	+		HGI48_RS09055	0.30	-0.2
1,949,180	+		HGI48_RS09055	0.30	+0.4
1,949,181	-		HGI48_RS09055	0.30	-2.3
1,949,181	-		HGI48_RS09055	0.30	+0.2
1,949,324	+		HGI48_RS09055	0.80	-0.1
1,949,324	+		HGI48_RS09055	0.80	-0.8
1,949,324	+		HGI48_RS09055	0.80	-1.3
1,949,371	-				+0.9
1,949,415	-		HGI48_RS09060	0.26	-1.4
1,949,566	-				+0.6
1,949,602	+				-0.8
1,949,602	+				-0.5
1,949,602	+				-0.1
1,949,602	+				-1.4
1,949,603	-				-0.2
1,949,603	-				-2.2
1,949,603	-				-1.6
1,949,603	-				+0.7
1,949,603	-				-2.4
1,949,606	+				-1.8
1,949,606	+				+0.4
1,949,606	+				+1.5
1,949,607	-				-2.1
1,949,661	+				+0.4
1,949,685	+				-0.4
1,949,727	-				-0.8
1,949,750	+				+0.7
1,949,787	+				+0.2