Strain Fitness in Dickeya dianthicola 67-19 around HGI48_RS08095

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
1,739,248	+		HGI48_RS08090	0.86	-0.8
1,739,249	-		HGI48_RS08090	0.86	-0.1
1,739,395	+				+0.2
1,739,540	+				+1.5
1,739,564	+				-0.2
1,739,564	+				-0.4
1,739,569	+				-0.3
1,739,569	+				-0.8
1,739,569	+				+0.7
1,739,569	+				-1.8
1,739,569	+				-1.0
1,739,570	-				-0.6
1,739,570	-				+0.1
1,739,570	-				+0.5
1,739,721	+				-0.0
1,739,754	+				+0.0
1,739,754	+				-1.1
1,739,754	+				-0.2
1,739,755	-				-0.6
1,739,755	-				-1.0
1,739,755	-				-0.2
1,739,760	-				+0.2
1,739,791	+				-0.6
1,739,791	+				-0.5
1,739,792	-				-1.2
1,739,792	-				+0.0
1,739,792	-				-1.8
1,739,807	+				+0.0
1,739,808	-				-1.6
1,739,808	-				-1.4
1,739,811	+				+0.4
1,739,812	-				-0.5
1,739,814	+				+1.0
1,739,815	-				+1.2
1,739,815	-				-0.4
1,739,854	+				-0.5
1,739,861	-				-0.4
1,739,861	-				-0.9
1,739,861	-				-1.9
1,739,887	+				-0.5
1,739,887	+				-0.8
1,739,963	-				+0.2
1,739,997	-				-1.0
1,740,053	-				+1.4
1,740,110	+				-0.1
1,740,110	+				-0.8
1,740,123	+				-0.1
1,740,124	-				-1.1
1,740,127	-				-0.5
1,740,133	-				-0.1
1,740,148	-				+0.2
1,740,165	+				+0.4
1,740,165	+				-0.5
1,740,166	-				-0.5
1,740,166	-				-1.8
1,740,166	-				-1.0
1,740,166	-				+1.5
1,740,166	-				-0.3
1,740,180	+				-0.3
1,740,181	-				+3.5
1,740,181	-				+0.2
1,740,195	+				-0.9
1,740,196	-				-1.0
1,740,269	+		HGI48_RS08095	0.11	-1.3
1,740,269	+		HGI48_RS08095	0.11	-0.2
1,740,269	+		HGI48_RS08095	0.11	-0.9
1,740,270	-		HGI48_RS08095	0.12	-1.2
1,740,270	-				-0.8
1,740,270	-		HGI48_RS08095	0.12	-1.1
1,740,271	+				+0.6
1,740,271	+		HGI48_RS08095	0.12	-0.1
1,740,271	+		HGI48_RS08095	0.12	+0.2
1,740,271	+		HGI48_RS08095	0.12	-0.1
1,740,272	-		HGI48_RS08095	0.12	-0.9
1,740,272	-		HGI48_RS08095	0.12	-0.6
1,740,272	-		HGI48_RS08095	0.12	+0.6
1,740,272	-		HGI48_RS08095	0.12	-0.4
1,740,272	-		HGI48_RS08095	0.12	-0.4
1,740,272	-		HGI48_RS08095	0.12	-2.1
1,740,272	-		HGI48_RS08095	0.12	-0.7
1,740,294	+		HGI48_RS08095	0.15	-0.0
1,740,334	-		HGI48_RS08095	0.20	+0.4
1,740,455	-				+0.8
1,740,488	+		HGI48_RS08095	0.39	-0.3
1,740,488	+		HGI48_RS08095	0.39	+0.1
1,740,526	+		HGI48_RS08095	0.44	-0.6
1,740,527	-		HGI48_RS08095	0.44	-0.8
1,740,527	-		HGI48_RS08095	0.44	+0.3
1,740,527	-		HGI48_RS08095	0.44	-1.4
1,740,628	-		HGI48_RS08095	0.57	-0.0
1,740,652	+		HGI48_RS08095	0.60	-0.7
1,740,788	-				+1.0
1,740,820	-		HGI48_RS08095	0.81	-1.4
1,740,863	-		HGI48_RS08095	0.87	-1.0
1,740,922	+				-0.0
1,740,923	-				-0.1
1,740,927	-				-1.8
1,740,947	-				+1.1
1,740,965	+				+0.2
1,740,975	+				-2.1
1,741,000	+				+0.2
1,741,001	-				+1.2
1,741,001	-				+0.2
1,741,167	+				-1.4
1,741,167	+				+0.8
1,741,180	+				-0.4
1,741,207	-		HGI48_RS08100	0.11	+0.1
1,741,297	+		HGI48_RS08100	0.16	-0.4
1,741,297	+		HGI48_RS08100	0.16	+0.2
1,741,299	+		HGI48_RS08100	0.17	+0.0
1,741,299	+		HGI48_RS08100	0.17	+0.1
1,741,373	+		HGI48_RS08100	0.21	+0.7
1,741,373	+		HGI48_RS08100	0.21	+0.5
1,741,374	-		HGI48_RS08100	0.21	-0.7
1,741,374	-		HGI48_RS08100	0.21	+0.1
1,741,393	+		HGI48_RS08100	0.22	+0.4
1,741,394	-		HGI48_RS08100	0.23	-2.1
1,741,435	-		HGI48_RS08100	0.25	-0.8
1,741,551	+		HGI48_RS08100	0.33	-0.8
1,741,586	-		HGI48_RS08100	0.35	+0.2
1,741,586	-		HGI48_RS08100	0.35	+0.8
1,741,620	+		HGI48_RS08100	0.37	+0.3
1,741,620	+		HGI48_RS08100	0.37	-0.5
1,741,620	+		HGI48_RS08100	0.37	-0.9
1,741,621	-				-1.4
1,741,788	+		HGI48_RS08100	0.48	-1.0
1,741,788	+		HGI48_RS08100	0.48	+0.2
1,741,826	-		HGI48_RS08100	0.50	-0.2
1,741,875	+		HGI48_RS08100	0.53	-0.3
1,741,875	+		HGI48_RS08100	0.53	-1.2