Strain Fitness in Dickeya dianthicola 67-19 around HGI48_RS08040

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
1,727,438	+				-0.2
1,727,438	+				+0.0
1,727,618	+		HGI48_RS08035	0.30	-1.8
1,727,618	+		HGI48_RS08035	0.30	-0.8
1,727,618	+		HGI48_RS08035	0.30	+0.4
1,727,618	+		HGI48_RS08035	0.30	-0.7
1,727,618	+		HGI48_RS08035	0.30	+0.2
1,727,618	+		HGI48_RS08035	0.30	-0.0
1,727,618	+		HGI48_RS08035	0.30	-1.0
1,727,618	+		HGI48_RS08035	0.30	-0.1
1,727,619	-		HGI48_RS08035	0.30	-0.1
1,727,619	-		HGI48_RS08035	0.30	+0.7
1,727,619	-		HGI48_RS08035	0.30	-1.0
1,727,619	-		HGI48_RS08035	0.30	+0.7
1,727,619	-		HGI48_RS08035	0.30	-2.8
1,727,619	-		HGI48_RS08035	0.30	-1.0
1,727,619	-		HGI48_RS08035	0.30	-0.2
1,727,810	+		HGI48_RS08035	0.52	+1.2
1,727,810	+		HGI48_RS08035	0.52	-1.1
1,727,810	+				-1.4
1,727,811	-		HGI48_RS08035	0.53	-0.1
1,727,811	-		HGI48_RS08035	0.53	-0.0
1,727,811	-		HGI48_RS08035	0.53	+0.2
1,727,811	-		HGI48_RS08035	0.53	+0.1
1,727,870	+				+0.6
1,727,870	+		HGI48_RS08035	0.60	-1.8
1,727,870	+		HGI48_RS08035	0.60	-2.1
1,727,871	-		HGI48_RS08035	0.60	+1.0
1,727,871	-		HGI48_RS08035	0.60	+1.4
1,727,992	+		HGI48_RS08035	0.74	+0.7
1,728,043	+		HGI48_RS08035	0.80	-0.4
1,728,044	-		HGI48_RS08035	0.80	+0.6
1,728,116	+		HGI48_RS08035	0.89	-1.0
1,728,117	-				+0.2
1,728,117	-		HGI48_RS08035	0.89	-0.3
1,728,126	-				+0.8
1,728,126	-		HGI48_RS08035	0.90	-1.3
1,728,197	-				+0.9
1,728,197	-				-1.6
1,728,264	+				+0.5
1,728,278	+				+0.0
1,728,278	+				+0.6
1,728,279	-				-2.1
1,728,284	+				-1.8
1,728,284	+				+1.0
1,728,284	+				-0.4
1,728,285	-				+0.2
1,728,285	-				-0.5
1,728,285	-				-1.0
1,728,285	-				+0.0
1,728,285	-				+0.1
1,728,285	-				-2.4
1,728,285	-				+0.1
1,728,290	+				-0.9
1,728,290	+				-2.1
1,728,290	+				-0.5
1,728,290	+				-0.4
1,728,290	+				+0.8
1,728,290	+				+0.3
1,728,291	-				+1.8
1,728,291	-				-0.4
1,728,378	-				+0.0
1,728,576	+				-1.4
1,728,577	-		HGI48_RS08040	0.26	-1.0
1,728,581	+		HGI48_RS08040	0.26	-0.8
1,728,582	-		HGI48_RS08040	0.26	-1.8
1,728,693	+		HGI48_RS08040	0.36	-0.7
1,728,694	-		HGI48_RS08040	0.36	-0.8
1,728,694	-		HGI48_RS08040	0.36	+0.2
1,728,694	-		HGI48_RS08040	0.36	+0.8
1,728,694	-				-0.4
1,728,694	-		HGI48_RS08040	0.36	-0.5
1,728,702	+		HGI48_RS08040	0.37	-0.1
1,728,702	+		HGI48_RS08040	0.37	-1.6
1,728,703	-		HGI48_RS08040	0.37	-1.1
1,728,703	-		HGI48_RS08040	0.37	-1.0
1,728,703	-		HGI48_RS08040	0.37	-0.7
1,728,703	-		HGI48_RS08040	0.37	+0.2
1,728,703	-		HGI48_RS08040	0.37	-1.2
1,728,703	-		HGI48_RS08040	0.37	-0.2
1,728,703	-		HGI48_RS08040	0.37	+0.8
1,728,703	-		HGI48_RS08040	0.37	-0.6
1,728,718	+		HGI48_RS08040	0.39	+0.2
1,728,718	+		HGI48_RS08040	0.39	+0.6
1,728,730	+		HGI48_RS08040	0.40	-2.4
1,728,731	-		HGI48_RS08040	0.40	-1.8
1,728,795	+		HGI48_RS08040	0.45	-0.2
1,728,796	-		HGI48_RS08040	0.46	-1.1
1,728,796	-		HGI48_RS08040	0.46	-0.4
1,728,796	-		HGI48_RS08040	0.46	+0.5
1,728,889	-		HGI48_RS08040	0.54	-0.9
1,728,981	+		HGI48_RS08040	0.62	-0.4
1,728,981	+		HGI48_RS08040	0.62	-0.2
1,729,053	-		HGI48_RS08040	0.68	-0.0
1,729,125	+		HGI48_RS08040	0.75	-0.7
1,729,127	+		HGI48_RS08040	0.75	-1.6
1,729,127	+		HGI48_RS08040	0.75	-0.0
1,729,128	-		HGI48_RS08040	0.75	-0.8
1,729,218	-		HGI48_RS08040	0.83	-0.2
1,729,218	-		HGI48_RS08040	0.83	-0.0
1,729,218	-		HGI48_RS08040	0.83	+0.2
1,729,278	+		HGI48_RS08040	0.89	-0.1
1,729,279	-		HGI48_RS08040	0.89	+0.2
1,729,279	-		HGI48_RS08040	0.89	-0.2
1,729,279	-		HGI48_RS08040	0.89	-0.0
1,729,305	+				-0.4
1,729,305	+				-0.4
1,729,305	+				+0.4
1,729,414	+				-0.1
1,729,414	+				+0.2
1,729,414	+				-1.8
1,729,415	-				-0.7
1,729,415	-				-0.2
1,729,415	-				-2.9
1,729,415	-				-0.2
1,729,415	-				+0.2
1,729,427	-				+0.7
1,729,427	-				+0.2
1,729,427	-				+0.2
1,729,632	-		HGI48_RS08045	0.16	+1.3
1,729,632	-		HGI48_RS08045	0.16	-0.2
1,729,842	-		HGI48_RS08045	0.32	-0.8
1,730,264	+		HGI48_RS08045	0.64	-1.4
1,730,264	+		HGI48_RS08045	0.64	-0.5
1,730,265	-		HGI48_RS08045	0.64	-0.4
1,730,282	-		HGI48_RS08045	0.66	-0.8