Strain Fitness in Dickeya dianthicola 67-19 around HGI48_RS07655

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
1,632,529	+		HGI48_RS07645	0.30	-0.5
1,632,529	+		HGI48_RS07645	0.30	-0.2
1,632,537	-		HGI48_RS07645	0.31	-0.4
1,632,610	+		HGI48_RS07645	0.40	+0.2
1,632,611	-		HGI48_RS07645	0.40	-0.8
1,632,626	-		HGI48_RS07645	0.42	-1.3
1,632,626	-		HGI48_RS07645	0.42	+1.0
1,632,626	-		HGI48_RS07645	0.42	+0.6
1,632,724	+		HGI48_RS07645	0.54	-0.3
1,632,724	+		HGI48_RS07645	0.54	-1.0
1,632,725	-		HGI48_RS07645	0.55	-0.6
1,632,747	+		HGI48_RS07645	0.57	+0.2
1,632,759	-		HGI48_RS07645	0.59	+0.2
1,632,759	-		HGI48_RS07645	0.59	-0.6
1,632,802	+		HGI48_RS07645	0.64	-0.8
1,632,835	+		HGI48_RS07645	0.68	-1.5
1,632,835	+		HGI48_RS07645	0.68	+1.8
1,632,835	+		HGI48_RS07645	0.68	-2.6
1,632,836	-		HGI48_RS07645	0.68	-2.6
1,632,836	-		HGI48_RS07645	0.68	+0.1
1,632,836	-		HGI48_RS07645	0.68	+0.0
1,632,838	+		HGI48_RS07645	0.69	-1.0
1,632,842	+		HGI48_RS07645	0.69	-2.1
1,632,842	+		HGI48_RS07645	0.69	-1.1
1,632,842	+		HGI48_RS07645	0.69	-0.1
1,632,842	+		HGI48_RS07645	0.69	-1.3
1,632,842	+		HGI48_RS07645	0.69	-1.9
1,632,842	+		HGI48_RS07645	0.69	+0.2
1,632,842	+		HGI48_RS07645	0.69	-0.1
1,632,843	-		HGI48_RS07645	0.69	+1.9
1,632,843	-		HGI48_RS07645	0.69	+0.0
1,632,843	-		HGI48_RS07645	0.69	-0.1
1,632,847	-		HGI48_RS07645	0.70	+0.7
1,632,886	-		HGI48_RS07645	0.74	+0.5
1,632,952	+		HGI48_RS07645	0.83	+0.5
1,632,952	+		HGI48_RS07645	0.83	+0.1
1,633,021	+				+0.2
1,633,022	-				+2.8
1,633,022	-				-0.8
1,633,022	-				+0.8
1,633,058	-				-1.1
1,633,058	-				+0.4
1,633,073	+				+0.1
1,633,073	+				+0.1
1,633,073	+				-1.2
1,633,074	-				+0.2
1,633,074	-				+0.7
1,633,074	-				+1.1
1,633,074	-				+1.2
1,633,091	+				-0.8
1,633,091	+				+1.7
1,633,091	+				-1.3
1,633,091	+				+1.1
1,633,091	+				-0.3
1,633,091	+				+0.6
1,633,091	+				-0.8
1,633,091	+				-0.8
1,633,091	+				-1.2
1,633,092	-				+1.1
1,633,092	-				-0.2
1,633,092	-				-0.8
1,633,095	+				-0.3
1,633,095	+				+1.2
1,633,113	-				+0.6
1,633,152	+				+1.4
1,633,168	+				+1.0
1,633,169	-				-0.1
1,633,169	-				-1.1
1,633,169	-				-1.2
1,633,204	+		HGI48_RS07650	0.19	+0.4
1,633,205	-		HGI48_RS07650	0.20	-1.0
1,633,275	-		HGI48_RS07650	0.70	+0.4
1,633,275	-		HGI48_RS07650	0.70	+0.5
1,633,275	-		HGI48_RS07650	0.70	-0.0
1,633,303	+				+0.9
1,633,303	+				-0.8
1,633,304	-				+0.2
1,633,331	+				-0.1
1,633,500	+				+0.6
1,633,503	+				-1.1
1,633,508	-				-0.8
1,633,508	-				-0.5
1,633,515	+				-1.0
1,633,515	+				-0.5
1,633,547	+				-2.1
1,633,547	+				-1.5
1,633,547	+				-0.6
1,633,547	+				-0.8
1,633,547	+				-2.3
1,633,547	+				+0.2
1,633,547	+				+1.0
1,633,548	-				-0.5
1,633,548	-				-0.1
1,633,548	-				-0.8
1,633,548	-				-0.2
1,633,548	-				-0.4
1,633,548	-				-2.3
1,633,548	-				-1.1
1,633,548	-				+0.4
1,633,590	+				-1.0
1,633,628	+				-0.3
1,633,629	-				+0.0
1,633,629	-				-0.3
1,633,629	-				+0.7
1,633,756	+		HGI48_RS07655	0.17	-0.0
1,633,757	-		HGI48_RS07655	0.17	+0.5
1,633,757	-		HGI48_RS07655	0.17	+1.4
1,633,757	-		HGI48_RS07655	0.17	-0.8
1,633,757	-		HGI48_RS07655	0.17	-0.1
1,633,761	-		HGI48_RS07655	0.18	-0.6
1,633,788	-		HGI48_RS07655	0.20	+0.1
1,633,835	+		HGI48_RS07655	0.23	+0.6
1,633,836	-		HGI48_RS07655	0.23	+0.4
1,633,890	-		HGI48_RS07655	0.27	-0.9
1,634,318	+		HGI48_RS07655	0.60	+0.6
1,634,318	+		HGI48_RS07655	0.60	+0.1
1,634,318	+		HGI48_RS07655	0.60	+0.2
1,634,318	+		HGI48_RS07655	0.60	-1.1
1,634,318	+		HGI48_RS07655	0.60	-0.3
1,634,319	-		HGI48_RS07655	0.60	-2.1
1,634,319	-		HGI48_RS07655	0.60	-0.0
1,634,319	-		HGI48_RS07655	0.60	-0.8
1,634,319	-				-1.3
1,634,319	-		HGI48_RS07655	0.60	-0.5
1,634,319	-				+0.2
1,634,319	-		HGI48_RS07655	0.60	-0.9
1,634,319	-		HGI48_RS07655	0.60	+0.7
1,634,320	+		HGI48_RS07655	0.60	-1.0
1,634,320	+		HGI48_RS07655	0.60	-0.8
1,634,320	+		HGI48_RS07655	0.60	-0.2
1,634,321	-		HGI48_RS07655	0.60	+0.2
1,634,321	-		HGI48_RS07655	0.60	-0.3
1,634,624	-		HGI48_RS07655	0.83	-0.1
1,634,773	-				-0.5
1,634,773	-				-0.8
1,634,773	-				+0.5
1,634,849	+				-0.5
1,634,849	+				-0.2
1,634,849	+				-2.6
1,634,849	+				+0.2
1,634,850	-				-0.3
1,634,850	-				+1.2
1,634,850	-				-0.8
1,634,850	-				-0.8
1,634,850	-				-0.3
1,635,185	+		HGI48_RS07660	0.38	+0.4
1,635,186	-		HGI48_RS07660	0.38	-0.2
1,635,186	-		HGI48_RS07660	0.38	-0.2
1,635,375	+		HGI48_RS07660	0.61	-2.3
1,635,722	-				+0.9
1,635,722	-				+0.8
1,635,722	-				-0.8
1,635,763	+				+1.8
1,635,779	+				-0.8
1,635,786	+				+1.0
1,635,786	+				-1.1
1,635,786	+				-0.1
1,635,791	+				-1.0
1,635,792	-				+0.1
1,635,830	+				-1.6
1,635,830	+				+1.0
1,635,831	-				-0.1