Strain Fitness in Dickeya dianthicola 67-19 around HGI48_RS07555

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
1,611,117	+		HGI48_RS07550	0.49	-0.0
1,611,118	-		HGI48_RS07550	0.49	-0.9
1,611,118	-		HGI48_RS07550	0.49	-1.6
1,611,201	-		HGI48_RS07550	0.54	-2.3
1,611,330	+		HGI48_RS07550	0.61	-0.3
1,611,330	+				+0.2
1,611,347	+		HGI48_RS07550	0.61	-2.1
1,611,372	+		HGI48_RS07550	0.63	+0.1
1,611,373	-		HGI48_RS07550	0.63	+1.0
1,611,546	+		HGI48_RS07550	0.72	+0.7
1,611,547	-		HGI48_RS07550	0.72	+0.0
1,611,547	-				+0.2
1,611,584	+		HGI48_RS07550	0.74	-0.1
1,611,840	+		HGI48_RS07550	0.88	-0.8
1,611,841	-		HGI48_RS07550	0.88	+0.6
1,611,841	-		HGI48_RS07550	0.88	-0.2
1,611,957	+				-0.3
1,611,957	+				+0.6
1,612,014	-				+0.2
1,612,059	+				+0.0
1,612,060	-				+0.8
1,612,060	-				-0.1
1,612,060	-				-0.3
1,612,107	-				-0.8
1,612,150	-		HGI48_RS07555	0.12	-2.9
1,612,204	+		HGI48_RS07555	0.19	-2.6
1,612,247	+		HGI48_RS07555	0.25	-0.6
1,612,248	-		HGI48_RS07555	0.25	-0.3
1,612,385	+		HGI48_RS07555	0.42	+0.6
1,612,385	+		HGI48_RS07555	0.42	+0.2
1,612,385	+				-0.8
1,612,389	-		HGI48_RS07555	0.43	-0.1
1,612,460	+		HGI48_RS07555	0.52	-0.6
1,612,461	-		HGI48_RS07555	0.52	-0.0
1,612,461	-		HGI48_RS07555	0.52	-0.4
1,612,606	-		HGI48_RS07555	0.71	+0.3
1,612,606	-		HGI48_RS07555	0.71	+1.4
1,612,685	+		HGI48_RS07555	0.81	+0.4
1,612,685	+		HGI48_RS07555	0.81	-0.8
1,612,685	+		HGI48_RS07555	0.81	-0.0
1,612,686	-		HGI48_RS07555	0.81	+1.2
1,612,753	-		HGI48_RS07555	0.90	+0.6
1,612,789	-				-0.2
1,612,889	+				+1.8
1,612,890	-				-0.8
1,612,938	-				-0.4
1,612,962	+				+0.2
1,612,962	+				-0.7
1,612,962	+				+0.6
1,612,963	-				-1.0
1,613,039	-				-0.4
1,613,049	+				-0.6
1,613,049	+				-1.9
1,613,049	+				-0.4
1,613,049	+				-0.9
1,613,049	+				-1.4
1,613,049	+				+0.1
1,613,049	+				-0.8
1,613,049	+				-0.4
1,613,050	-				+0.1
1,613,050	-				-2.6
1,613,050	-				+0.5
1,613,050	-				-0.4
1,613,050	-				-0.3
1,613,050	-				-0.1
1,613,050	-				-0.1
1,613,077	-				+0.2
1,613,330	+		HGI48_RS07560	0.19	+1.2
1,613,331	-		HGI48_RS07560	0.19	+0.6
1,613,333	+		HGI48_RS07560	0.19	-0.0
1,613,333	+		HGI48_RS07560	0.19	-0.2
1,613,333	+		HGI48_RS07560	0.19	-1.2
1,613,333	+				+1.8
1,613,333	+		HGI48_RS07560	0.19	-0.5
1,613,333	+		HGI48_RS07560	0.19	-0.6
1,613,334	-		HGI48_RS07560	0.19	-0.8
1,613,336	+		HGI48_RS07560	0.19	-0.5
1,613,337	-				+1.2
1,613,337	-		HGI48_RS07560	0.19	+0.7
1,613,337	-		HGI48_RS07560	0.19	-0.9
1,613,366	+		HGI48_RS07560	0.20	+0.8
1,613,367	-		HGI48_RS07560	0.21	-1.4
1,613,367	-		HGI48_RS07560	0.21	-0.0
1,613,493	+		HGI48_RS07560	0.27	-0.4
1,613,538	+		HGI48_RS07560	0.30	+0.8
1,613,633	+		HGI48_RS07560	0.35	+0.1
1,613,634	-		HGI48_RS07560	0.35	+0.6
1,613,658	+		HGI48_RS07560	0.36	+0.7
1,613,658	+				-0.8
1,613,659	-		HGI48_RS07560	0.36	-0.5
1,613,659	-		HGI48_RS07560	0.36	+0.5
1,613,714	+		HGI48_RS07560	0.39	+0.2