Strain Fitness in Dickeya dianthicola 67-19 around HGI48_RS06445

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
1,365,834	-		HGI48_RS06435	0.32	-1.4
1,365,834	-		HGI48_RS06435	0.32	+0.7
1,365,853	+		HGI48_RS06435	0.53	-0.7
1,365,867	+		HGI48_RS06435	0.69	-0.7
1,365,868	-		HGI48_RS06435	0.70	+0.0
1,365,889	-				+0.8
1,365,889	-				-0.6
1,365,922	+				-0.7
1,366,092	+				+0.3
1,366,092	+				-0.1
1,366,092	+				+0.1
1,366,093	-				-0.7
1,366,093	-				-0.1
1,366,093	-				-0.5
1,366,093	-				+0.1
1,366,093	-				+0.5
1,366,113	-				+0.0
1,366,205	-				-0.2
1,366,258	+				-0.7
1,366,259	-				-0.8
1,366,259	-				+0.8
1,366,302	+				-1.0
1,366,316	+				-2.5
1,366,316	+				-2.0
1,366,316	+				-0.4
1,366,317	-				-1.7
1,366,326	+				+0.7
1,366,326	+				-1.7
1,366,326	+				-2.5
1,366,326	+				-1.1
1,366,326	+				-0.3
1,366,326	+				+0.3
1,366,326	+				+0.5
1,366,327	-				-0.1
1,366,327	-				+0.6
1,366,327	-				-0.4
1,366,327	-				+0.5
1,366,327	-				+0.3
1,366,327	-				-0.1
1,366,327	-				-2.0
1,366,327	-				+0.0
1,366,327	-				-0.7
1,366,327	-				-0.3
1,366,327	-				+0.7
1,366,327	-				+0.5
1,366,327	-				-1.1
1,366,335	+				+0.7
1,366,335	+				-0.7
1,366,440	+				+1.3
1,366,440	+		HGI48_RS06440	0.59	+0.6
1,366,440	+		HGI48_RS06440	0.59	+0.1
1,366,441	-		HGI48_RS06440	0.60	-1.2
1,366,441	-		HGI48_RS06440	0.60	-1.5
1,366,441	-		HGI48_RS06440	0.60	-0.8
1,366,441	-		HGI48_RS06440	0.60	+0.3
1,366,612	+				-1.5
1,366,645	-				-1.4
1,366,685	+				-0.1
1,366,686	-				+0.3
1,366,686	-				-0.4
1,366,686	-				-1.7
1,366,690	+				+0.2
1,366,691	-				+1.2
1,366,691	-				+0.9
1,366,712	-				-0.4
1,366,839	+		HGI48_RS06445	0.12	-0.3
1,366,839	+		HGI48_RS06445	0.12	-0.8
1,366,840	-		HGI48_RS06445	0.12	+0.0
1,366,913	+		HGI48_RS06445	0.19	-0.4
1,366,914	-		HGI48_RS06445	0.19	-0.2
1,366,914	-		HGI48_RS06445	0.19	-1.2
1,366,914	-		HGI48_RS06445	0.19	-0.2
1,367,031	+				-0.7
1,367,032	-		HGI48_RS06445	0.32	-3.4
1,367,032	-		HGI48_RS06445	0.32	+0.2
1,367,032	-		HGI48_RS06445	0.32	-0.4
1,367,083	-				+2.3
1,367,108	+		HGI48_RS06445	0.40	-1.2
1,367,109	-		HGI48_RS06445	0.40	-1.5
1,367,109	-		HGI48_RS06445	0.40	-0.7
1,367,141	-		HGI48_RS06445	0.43	-2.5
1,367,141	-		HGI48_RS06445	0.43	+0.5
1,367,302	-		HGI48_RS06445	0.60	+0.3
1,367,303	+		HGI48_RS06445	0.60	+0.3
1,367,303	+		HGI48_RS06445	0.60	+0.1
1,367,303	+		HGI48_RS06445	0.60	+0.8
1,367,304	-		HGI48_RS06445	0.60	-1.2
1,367,304	-				+0.3
1,367,304	-		HGI48_RS06445	0.60	-1.0
1,367,304	-		HGI48_RS06445	0.60	+0.9
1,367,304	-		HGI48_RS06445	0.60	+0.3
1,367,304	-		HGI48_RS06445	0.60	-0.9
1,367,304	-		HGI48_RS06445	0.60	-2.0
1,367,304	-		HGI48_RS06445	0.60	-0.4
1,367,304	-		HGI48_RS06445	0.60	+0.1
1,367,599	-				-0.1
1,367,640	+				+1.6
1,367,671	+				-0.2
1,367,704	+				-3.0
1,367,704	+				+0.3
1,367,751	-				-0.2
1,367,751	-				+0.9
1,367,751	-				+1.8
1,367,751	-				+0.8
1,368,020	-				+0.8
1,368,020	-		HGI48_RS06450	0.21	+0.5
1,368,031	+		HGI48_RS06450	0.22	-0.0
1,368,160	+				+1.3
1,368,160	+		HGI48_RS06450	0.31	-2.2
1,368,160	+		HGI48_RS06450	0.31	-1.0
1,368,160	+				+1.9
1,368,160	+		HGI48_RS06450	0.31	-1.5
1,368,160	+		HGI48_RS06450	0.31	+0.4
1,368,160	+		HGI48_RS06450	0.31	-0.4
1,368,161	-		HGI48_RS06450	0.31	+0.1
1,368,161	-		HGI48_RS06450	0.31	+0.1
1,368,161	-				+0.3
1,368,161	-		HGI48_RS06450	0.31	-0.7
1,368,161	-		HGI48_RS06450	0.31	-0.2
1,368,172	-				-1.2
1,368,342	-		HGI48_RS06450	0.44	-1.0
1,368,382	+		HGI48_RS06450	0.47	-0.3
1,368,383	-		HGI48_RS06450	0.47	-0.0
1,368,437	-		HGI48_RS06450	0.50	-0.1
1,368,531	+		HGI48_RS06450	0.57	-0.1