Strain Fitness in Dickeya dianthicola 67-19 around HGI48_RS06300

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
1,337,564	+		HGI48_RS06295	0.57	-0.3
1,337,602	+		HGI48_RS06295	0.59	-0.1
1,337,676	+		HGI48_RS06295	0.65	-0.0
1,337,676	+		HGI48_RS06295	0.65	+0.9
1,337,676	+		HGI48_RS06295	0.65	-0.1
1,337,678	+		HGI48_RS06295	0.65	-0.2
1,337,686	+		HGI48_RS06295	0.65	-1.6
1,337,687	-		HGI48_RS06295	0.65	-0.6
1,337,702	+		HGI48_RS06295	0.66	+0.6
1,337,703	-		HGI48_RS06295	0.66	-0.1
1,337,703	-		HGI48_RS06295	0.66	+0.0
1,337,703	-				-0.6
1,337,804	-		HGI48_RS06295	0.74	-0.6
1,337,888	+		HGI48_RS06295	0.79	+0.9
1,337,889	-		HGI48_RS06295	0.80	-0.6
1,337,889	-				+0.8
1,337,889	-		HGI48_RS06295	0.80	-0.6
1,337,889	-		HGI48_RS06295	0.80	-0.1
1,337,914	-		HGI48_RS06295	0.81	-0.0
1,338,040	-				-0.6
1,338,096	+				+0.4
1,338,097	-				+0.8
1,338,097	-				-0.6
1,338,097	-				+0.4
1,338,097	-				-0.2
1,338,097	-				+0.1
1,338,131	+				-0.1
1,338,131	+				+1.4
1,338,131	+				-0.2
1,338,132	-				+0.6
1,338,132	-				-0.1
1,338,162	+				-1.2
1,338,192	-				+0.2
1,338,221	+				+1.1
1,338,221	+				-1.4
1,338,221	+				+0.2
1,338,221	+				-0.1
1,338,221	+				-0.3
1,338,221	+				-0.5
1,338,222	-				-1.6
1,338,238	+				+0.8
1,338,239	-				-1.5
1,338,252	+				+0.1
1,338,253	-				-0.4
1,338,253	-				+0.2
1,338,257	+				+0.9
1,338,258	-				-0.4
1,338,329	+				-2.6
1,338,334	+				-1.2
1,338,373	+				-0.9
1,338,374	-				+0.4
1,338,377	+				-0.6
1,338,377	+				-1.6
1,338,377	+				-0.3
1,338,377	+				-0.1
1,338,377	+				-0.6
1,338,377	+				-0.3
1,338,425	+				-0.1
1,338,425	+				+0.4
1,339,605	+				+1.7
1,339,606	-				-2.5
1,339,635	+				-1.6
1,339,646	+				+0.7
1,339,646	+				-1.4
1,339,646	+				+0.7
1,339,646	+				+1.0
1,339,646	+				+0.8
1,339,646	+				-2.0
1,339,646	+				+0.0
1,339,647	-				-0.0
1,339,647	-				-0.2
1,339,647	-				+0.7
1,339,647	-				+0.4
1,339,647	-				+1.1
1,339,647	-				+1.4
1,339,768	-				+0.1
1,339,794	+				-1.5
1,339,794	+				+1.2
1,339,795	-				+0.1
1,339,795	-				+0.1
1,339,795	-				-2.2
1,339,795	-				-1.0
1,339,798	+				+0.4
1,339,798	+				-0.6
1,339,799	-				+0.5
1,339,799	-				+1.1
1,339,902	+		HGI48_RS06305	0.35	+0.4
1,339,902	+		HGI48_RS06305	0.35	-0.1
1,339,902	+		HGI48_RS06305	0.35	-1.6
1,339,902	+		HGI48_RS06305	0.35	-0.4
1,339,902	+		HGI48_RS06305	0.35	-0.2
1,339,902	+		HGI48_RS06305	0.35	-1.6
1,339,902	+		HGI48_RS06305	0.35	+0.6
1,339,903	-		HGI48_RS06305	0.35	+1.2
1,339,903	-		HGI48_RS06305	0.35	-1.3
1,339,903	-		HGI48_RS06305	0.35	-0.9
1,339,918	-		HGI48_RS06305	0.40	+0.4
1,339,962	+		HGI48_RS06305	0.53	-2.1
1,339,981	+		HGI48_RS06305	0.59	-0.0
1,339,981	+		HGI48_RS06305	0.59	-1.5
1,339,982	-		HGI48_RS06305	0.59	+0.9
1,339,982	-		HGI48_RS06305	0.59	-0.1
1,339,982	-		HGI48_RS06305	0.59	-0.1
1,340,144	+				-0.6
1,340,145	-				-0.9
1,340,145	-				+0.4
1,340,167	+				-2.2
1,340,168	-				-0.3
1,340,168	-				-0.2
1,340,187	+				-2.0
1,340,240	+				-0.6
1,340,241	-				+0.4
1,340,241	-				-0.6
1,340,241	-				-0.4
1,340,363	+		HGI48_RS06315	0.51	-1.0
1,340,364	-		HGI48_RS06315	0.52	+0.1
1,340,364	-		HGI48_RS06315	0.52	-1.6
1,340,392	+				-0.2
1,340,392	+		HGI48_RS06315	0.88	-1.0
1,340,535	-				-0.8