Strain Fitness in Dickeya dianthicola 67-19 around HGI48_RS06075

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
1,295,001	+		HGI48_RS06070	0.30	-0.6
1,295,001	+				+1.1
1,295,001	+				+1.1
1,295,001	+		HGI48_RS06070	0.30	+0.5
1,295,002	-		HGI48_RS06070	0.30	-0.3
1,295,002	-		HGI48_RS06070	0.30	-0.5
1,295,002	-		HGI48_RS06070	0.30	+1.4
1,295,041	+		HGI48_RS06070	0.34	+0.7
1,295,119	-		HGI48_RS06070	0.41	-0.2
1,295,146	+		HGI48_RS06070	0.44	-1.0
1,295,281	+		HGI48_RS06070	0.57	-0.5
1,295,281	+				+1.4
1,295,282	-				+2.7
1,295,282	-		HGI48_RS06070	0.57	+0.1
1,295,401	+		HGI48_RS06070	0.69	+0.0
1,295,404	+		HGI48_RS06070	0.69	+0.4
1,295,405	-		HGI48_RS06070	0.69	-0.9
1,295,484	-		HGI48_RS06070	0.77	-0.4
1,295,612	+		HGI48_RS06070	0.89	+0.2
1,295,613	-		HGI48_RS06070	0.89	+0.1
1,295,640	+				+0.1
1,295,640	+				-0.1
1,295,658	+				+0.0
1,295,658	+				-0.1
1,295,659	-				+0.4
1,295,659	-				+0.4
1,295,682	-				+1.5
1,295,682	-				-0.1
1,295,701	+				+0.1
1,295,701	+				-0.6
1,295,701	+				-0.4
1,295,701	+				+1.2
1,295,701	+				-0.1
1,295,702	-				-1.0
1,295,702	-				+0.1
1,295,702	-				-0.1
1,295,748	+				-0.1
1,295,782	+				-0.1
1,295,782	+				+1.4
1,295,783	-				+0.9
1,295,783	-				+0.6
1,295,790	+				-0.2
1,295,790	+				+0.9
1,295,868	+				+0.8
1,295,868	+				-0.1
1,295,869	-				-0.2
1,295,869	-				+0.0
1,295,869	-				-0.4
1,295,869	-				+0.8
1,295,869	-				-2.2
1,295,924	+				-0.2
1,295,931	+				-0.9
1,295,931	+				+0.7
1,295,931	+				-0.2
1,295,931	+				-1.2
1,295,932	-				-0.6
1,295,932	-				-1.0
1,295,932	-				-0.6
1,295,932	-				+0.2
1,295,948	+				+0.3
1,295,950	+				-0.6
1,296,038	+				-1.1
1,296,039	-				+0.9
1,296,039	-				+0.2
1,296,039	-				-0.1
1,296,039	-				+0.4
1,296,120	+				-0.2
1,296,198	-		HGI48_RS06075	0.32	+0.2
1,296,303	+		HGI48_RS06075	0.48	-0.6
1,296,304	-		HGI48_RS06075	0.48	+0.2
1,296,425	+				+1.6
1,296,535	-		HGI48_RS06075	0.85	+0.7
1,296,535	-		HGI48_RS06075	0.85	-1.2
1,296,535	-		HGI48_RS06075	0.85	+1.2
1,296,574	-				+0.1
1,296,574	-				+0.2
1,296,574	-				-0.8
1,296,574	-				-2.6
1,296,791	+				+1.2
1,296,791	+				+1.2
1,296,975	+		HGI48_RS06080	0.13	-0.4
1,296,989	+		HGI48_RS06080	0.14	-0.3
1,296,989	+				-1.2
1,296,990	-		HGI48_RS06080	0.14	-0.4
1,296,990	-		HGI48_RS06080	0.14	-0.1
1,296,990	-		HGI48_RS06080	0.14	-2.0
1,297,008	+		HGI48_RS06080	0.15	-0.2
1,297,008	+		HGI48_RS06080	0.15	-2.2
1,297,009	-				+0.9
1,297,009	-		HGI48_RS06080	0.16	-1.5
1,297,052	-		HGI48_RS06080	0.19	+1.9
1,297,052	-		HGI48_RS06080	0.19	+0.5
1,297,065	+		HGI48_RS06080	0.20	-0.6
1,297,066	-		HGI48_RS06080	0.20	+0.6
1,297,274	+		HGI48_RS06080	0.36	-1.4
1,297,275	-		HGI48_RS06080	0.36	+0.0
1,297,275	-		HGI48_RS06080	0.36	+0.4
1,297,286	+		HGI48_RS06080	0.37	+0.6
1,297,286	+				+2.4
1,297,287	-		HGI48_RS06080	0.37	-1.0
1,297,316	-		HGI48_RS06080	0.39	+0.7
1,297,384	-		HGI48_RS06080	0.44	-0.4
1,297,384	-		HGI48_RS06080	0.44	-0.1
1,297,384	-		HGI48_RS06080	0.44	+0.0
1,297,384	-		HGI48_RS06080	0.44	+0.0
1,297,462	-		HGI48_RS06080	0.50	-2.2
1,297,462	-		HGI48_RS06080	0.50	-0.7