Strain Fitness in Dickeya dianthicola 67-19 around HGI48_RS06005

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
1,277,377	+				+0.4
1,277,453	+				+0.4
1,277,453	+				-0.5
1,277,512	-				+0.1
1,277,614	+		HGI48_RS06000	0.21	-2.0
1,277,614	+		HGI48_RS06000	0.21	+0.0
1,277,614	+		HGI48_RS06000	0.21	-0.6
1,277,614	+		HGI48_RS06000	0.21	-0.0
1,277,615	-				-0.2
1,277,615	-				+2.7
1,277,615	-		HGI48_RS06000	0.21	-1.0
1,277,615	-		HGI48_RS06000	0.21	-1.1
1,277,856	+		HGI48_RS06000	0.49	+0.1
1,277,959	-		HGI48_RS06000	0.61	+0.0
1,278,047	+		HGI48_RS06000	0.71	-0.5
1,278,048	-		HGI48_RS06000	0.71	-0.0
1,278,123	+		HGI48_RS06000	0.80	-0.7
1,278,206	+		HGI48_RS06000	0.89	-0.7
1,278,206	+		HGI48_RS06000	0.89	+0.5
1,278,206	+		HGI48_RS06000	0.89	-2.1
1,278,206	+		HGI48_RS06000	0.89	-0.9
1,278,207	-		HGI48_RS06000	0.89	-0.4
1,278,267	+				-0.4
1,278,292	+				+0.4
1,278,292	+				-0.6
1,278,292	+				-0.5
1,278,293	-				+0.1
1,278,293	-				+2.4
1,278,293	-				-1.2
1,278,293	-				-1.6
1,278,417	+				-1.0
1,278,417	+				+0.0
1,278,417	+				-1.0
1,278,418	-				+0.4
1,278,499	-		HGI48_RS06005	0.18	-0.3
1,278,624	+		HGI48_RS06005	0.34	-0.9
1,278,624	+		HGI48_RS06005	0.34	-0.6
1,278,625	-		HGI48_RS06005	0.34	-1.0
1,278,685	+		HGI48_RS06005	0.42	+0.3
1,278,878	-		HGI48_RS06005	0.67	-0.6
1,278,942	-		HGI48_RS06005	0.75	+0.2
1,279,136	+				-1.0
1,279,142	+				+0.5
1,279,164	-				-0.1
1,279,183	+				-0.9
1,279,183	+				-0.0
1,279,183	+				-0.7
1,279,183	+				+0.4
1,279,184	-				-0.8
1,279,184	-				+0.1
1,279,201	+				-1.1
1,279,217	-				-1.2
1,279,223	-				-0.7
1,279,269	+				+0.6
1,279,270	-				-0.2
1,279,270	-				+2.8
1,279,270	-				-0.0
1,279,276	+				-0.6
1,279,276	+				+0.4
1,279,276	+				+0.2
1,279,276	+				-1.6
1,279,276	+				-0.7
1,279,276	+				-2.4
1,279,277	-				-1.4
1,279,283	+				-1.6
1,279,283	+				+0.4
1,279,283	+				+0.1
1,279,283	+				+0.6
1,279,283	+				+0.0
1,279,284	-				+0.8
1,279,284	-				+1.0
1,279,394	+		HGI48_RS06010	0.17	+0.4
1,279,395	-		HGI48_RS06010	0.18	+0.6
1,279,395	-		HGI48_RS06010	0.18	+0.6
1,279,395	-		HGI48_RS06010	0.18	+0.2
1,279,478	+		HGI48_RS06010	0.31	+0.9
1,279,490	+				+1.1
1,279,491	-		HGI48_RS06010	0.33	-0.5
1,279,491	-				+1.4
1,279,551	+		HGI48_RS06010	0.42	+1.2
1,279,551	+		HGI48_RS06010	0.42	+0.0
1,279,795	-		HGI48_RS06010	0.80	+1.8
1,279,795	-		HGI48_RS06010	0.80	+1.2
1,279,811	-		HGI48_RS06010	0.82	-0.6
1,279,837	-		HGI48_RS06010	0.86	+0.6
1,279,926	+				+0.6
1,279,927	-				-0.5
1,279,927	-				+0.4
1,279,929	+				-0.8
1,279,929	+				-0.2
1,279,930	-				-2.4
1,279,930	-				+0.0