Strain Fitness in Dickeya dianthicola 67-19 around HGI48_RS05955

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
1,265,617	+				+1.7
1,265,617	+				-1.6
1,265,617	+				-0.6
1,265,617	+				+0.3
1,265,617	+				+1.0
1,265,618	-				+1.4
1,265,618	-				+0.4
1,265,618	-				-0.0
1,265,618	-				+1.0
1,265,618	-				+0.8
1,265,630	+				+0.1
1,265,631	-				+1.7
1,265,631	-				+0.7
1,265,634	+				-1.7
1,265,666	+				-1.4
1,265,700	+				+0.6
1,265,700	+				-0.0
1,265,700	+				-0.6
1,265,700	+				-0.1
1,265,700	+				-0.1
1,265,701	-				+0.3
1,265,701	-				+0.7
1,265,703	-				-2.0
1,265,739	-				-1.4
1,265,777	+				+1.1
1,265,820	+				+1.4
1,265,866	+				-1.2
1,265,866	+				+0.4
1,265,867	-				-0.6
1,265,867	-				-0.0
1,265,873	-				+0.4
1,265,873	-				+2.2
1,265,873	-				+0.7
1,265,951	+				-1.2
1,265,951	+				-1.0
1,265,952	-				+0.8
1,266,020	-				+0.2
1,266,020	-				-0.2
1,266,036	-				-0.2
1,266,036	-				+0.4
1,266,037	+				-0.8
1,266,038	-				+0.8
1,266,046	+				-1.0
1,266,047	-				+1.2
1,266,057	-				+1.1
1,266,057	-				-0.8
1,266,068	-				-1.0
1,266,068	-				-1.2
1,266,124	-				-0.6
1,266,124	-				-0.6
1,266,181	+				+0.3
1,266,181	+				-0.6
1,266,181	+				+1.0
1,266,187	-				-0.2
1,266,190	+				+0.2
1,266,190	+				-1.3
1,266,193	-				+0.1
1,266,288	+				-0.6
1,266,512	+				-1.4
1,266,512	+				-0.9
1,266,512	+				-1.0
1,266,513	-				+0.1
1,266,513	-				-1.2
1,266,532	+				-2.0
1,266,533	-				-3.2
1,266,555	-				+0.4
1,266,555	-				-1.4
1,266,555	-				-1.4
1,266,555	-				-0.6
1,266,585	+				+0.6
1,266,587	+				+0.1
1,266,587	+				+1.4
1,266,588	-				-0.6
1,266,588	-				-0.4
1,266,611	-				-0.4
1,266,782	-		HGI48_RS05955	0.12	-0.3
1,266,939	+				+1.8
1,266,939	+		HGI48_RS05955	0.24	-1.2
1,266,940	-		HGI48_RS05955	0.24	+0.0
1,267,113	+		HGI48_RS05955	0.37	-1.5
1,267,119	+		HGI48_RS05955	0.38	-0.0
1,267,121	+		HGI48_RS05955	0.38	-2.0
1,267,122	-		HGI48_RS05955	0.38	-0.5
1,267,122	-				-1.2
1,267,122	-				+0.8
1,267,167	-		HGI48_RS05955	0.41	+0.6
1,267,167	-		HGI48_RS05955	0.41	-1.2
1,267,167	-		HGI48_RS05955	0.41	-0.8
1,267,169	+		HGI48_RS05955	0.42	+0.0
1,267,169	+		HGI48_RS05955	0.42	+0.4
1,267,169	+		HGI48_RS05955	0.42	-1.0
1,267,169	+		HGI48_RS05955	0.42	+0.0
1,267,169	+		HGI48_RS05955	0.42	+0.2
1,267,169	+				+0.8
1,267,170	-		HGI48_RS05955	0.42	+0.2
1,267,170	-		HGI48_RS05955	0.42	-0.4
1,267,170	-		HGI48_RS05955	0.42	-1.2
1,267,170	-		HGI48_RS05955	0.42	-2.0
1,267,170	-		HGI48_RS05955	0.42	+0.1
1,267,170	-		HGI48_RS05955	0.42	+0.5
1,267,170	-		HGI48_RS05955	0.42	+0.0
1,267,170	-		HGI48_RS05955	0.42	-1.6
1,267,298	-		HGI48_RS05955	0.51	-0.6
1,267,314	+		HGI48_RS05955	0.53	-0.6
1,267,314	+		HGI48_RS05955	0.53	-0.6
1,267,315	-		HGI48_RS05955	0.53	+0.1
1,267,315	-		HGI48_RS05955	0.53	+0.6
1,267,383	+		HGI48_RS05955	0.58	+0.1
1,267,478	+		HGI48_RS05955	0.65	+0.0
1,267,478	+		HGI48_RS05955	0.65	-1.0
1,267,478	+		HGI48_RS05955	0.65	-0.7
1,267,479	-		HGI48_RS05955	0.65	+0.4
1,267,479	-		HGI48_RS05955	0.65	-1.4
1,267,479	-		HGI48_RS05955	0.65	-0.6
1,267,763	-		HGI48_RS05955	0.86	+0.1
1,267,837	+				-0.7
1,267,837	+				-0.8
1,267,837	+				-2.4
1,267,838	-				+0.2
1,267,838	-				-0.8
1,267,838	-				-0.3
1,267,838	-				+1.3
1,267,935	+				-2.0
1,267,935	+				+0.6
1,267,936	-				+0.0
1,267,952	+				+0.6
1,267,953	-				+0.8
1,267,953	-				-1.2
1,267,970	+				+0.4
1,267,970	+				-0.6
1,267,971	-				-1.4
1,267,971	-				+0.2
1,267,971	-				-2.2
1,267,971	-				+0.5
1,268,001	+				-0.2
1,268,006	-				-2.0
1,268,054	+				-0.8
1,268,054	+				-0.7
1,268,055	-				-0.4
1,268,061	-				-0.4
1,268,117	+				-1.1
1,268,192	+				+0.4
1,268,193	-				-0.2
1,268,241	-		HGI48_RS05960	0.12	+0.1
1,268,269	+		HGI48_RS05960	0.13	-2.0
1,268,269	+		HGI48_RS05960	0.13	-0.5
1,268,348	-		HGI48_RS05960	0.18	-0.4
1,268,449	+		HGI48_RS05960	0.24	-1.2
1,268,563	+		HGI48_RS05960	0.31	-0.2
1,268,563	+		HGI48_RS05960	0.31	+0.4
1,268,563	+		HGI48_RS05960	0.31	+0.0
1,268,564	-		HGI48_RS05960	0.31	-0.6
1,268,566	-		HGI48_RS05960	0.31	+0.0
1,268,566	-		HGI48_RS05960	0.31	+0.0
1,268,566	-		HGI48_RS05960	0.31	-0.8
1,268,929	+		HGI48_RS05960	0.53	+0.7
1,268,929	+		HGI48_RS05960	0.53	-1.0
1,268,929	+		HGI48_RS05960	0.53	-1.0
1,268,930	-		HGI48_RS05960	0.53	-2.2
1,268,930	-		HGI48_RS05960	0.53	-0.4
1,268,930	-		HGI48_RS05960	0.53	+0.1
1,268,930	-		HGI48_RS05960	0.53	-2.0
1,268,930	-		HGI48_RS05960	0.53	-0.0