Experiment: LB
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt HGI48_RS03025 and HGI48_RS03030 are separated by 124 nucleotides HGI48_RS03030 and HGI48_RS03035 overlap by 4 nucleotides HGI48_RS03035 and HGI48_RS03040 overlap by 4 nucleotides HGI48_RS03040 and HGI48_RS03045 overlap by 8 nucleotides
HGI48_RS03025: HGI48_RS03025 - phage virion morphogenesis protein, at 645,930 to 646,373
_RS03025
HGI48_RS03030: HGI48_RS03030 - phage baseplate assembly protein V, at 646,498 to 647,031
_RS03030
HGI48_RS03035: HGI48_RS03035 - GPW/gp25 family protein, at 647,028 to 647,378
_RS03035
HGI48_RS03040: HGI48_RS03040 - baseplate assembly protein, at 647,375 to 648,283
_RS03040
HGI48_RS03045: HGI48_RS03045 - phage tail protein I, at 648,276 to 648,884
_RS03045
Position (kb) 647
648 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3 at 646.030 kb on + strand, within HGI48_RS03025 at 646.030 kb on + strand at 646.031 kb on - strand, within HGI48_RS03025 at 646.115 kb on + strand, within HGI48_RS03025 at 646.115 kb on + strand, within HGI48_RS03025 at 646.153 kb on + strand, within HGI48_RS03025 at 646.153 kb on + strand, within HGI48_RS03025 at 646.153 kb on + strand at 646.153 kb on + strand, within HGI48_RS03025 at 646.153 kb on + strand, within HGI48_RS03025 at 646.153 kb on + strand, within HGI48_RS03025 at 646.154 kb on - strand, within HGI48_RS03025 at 646.154 kb on - strand, within HGI48_RS03025 at 646.154 kb on - strand, within HGI48_RS03025 at 646.154 kb on - strand, within HGI48_RS03025 at 646.154 kb on - strand, within HGI48_RS03025 at 646.167 kb on + strand, within HGI48_RS03025 at 646.293 kb on + strand at 646.294 kb on - strand, within HGI48_RS03025 at 646.294 kb on - strand, within HGI48_RS03025 at 646.395 kb on + strand at 646.395 kb on + strand at 646.395 kb on + strand at 646.395 kb on + strand at 646.395 kb on + strand at 646.396 kb on - strand at 646.419 kb on + strand at 646.435 kb on + strand at 646.435 kb on + strand at 646.435 kb on + strand at 646.447 kb on + strand at 646.476 kb on + strand at 646.477 kb on - strand at 646.611 kb on - strand at 646.704 kb on + strand, within HGI48_RS03030 at 646.780 kb on - strand, within HGI48_RS03030 at 646.825 kb on + strand, within HGI48_RS03030 at 646.825 kb on + strand, within HGI48_RS03030 at 646.957 kb on - strand, within HGI48_RS03030 at 646.970 kb on + strand, within HGI48_RS03030 at 646.970 kb on + strand, within HGI48_RS03030 at 646.970 kb on + strand, within HGI48_RS03030 at 646.970 kb on + strand, within HGI48_RS03030 at 646.971 kb on - strand, within HGI48_RS03030 at 646.971 kb on - strand, within HGI48_RS03030 at 646.971 kb on - strand, within HGI48_RS03030 at 646.971 kb on - strand, within HGI48_RS03030 at 646.971 kb on - strand at 646.971 kb on - strand, within HGI48_RS03030 at 646.971 kb on - strand, within HGI48_RS03030 at 646.974 kb on + strand, within HGI48_RS03030 at 646.974 kb on + strand, within HGI48_RS03030 at 646.974 kb on + strand, within HGI48_RS03030 at 646.975 kb on - strand, within HGI48_RS03030 at 646.975 kb on - strand, within HGI48_RS03030 at 646.994 kb on + strand at 646.995 kb on - strand at 647.011 kb on - strand at 647.011 kb on - strand at 647.011 kb on - strand at 647.038 kb on - strand at 647.038 kb on - strand at 647.226 kb on + strand, within HGI48_RS03035 at 647.226 kb on + strand, within HGI48_RS03035 at 647.226 kb on + strand, within HGI48_RS03035 at 647.226 kb on + strand, within HGI48_RS03035 at 647.226 kb on + strand, within HGI48_RS03035 at 647.226 kb on + strand at 647.226 kb on + strand, within HGI48_RS03035 at 647.227 kb on - strand, within HGI48_RS03035 at 647.227 kb on - strand, within HGI48_RS03035 at 647.227 kb on - strand, within HGI48_RS03035 at 647.227 kb on - strand, within HGI48_RS03035 at 647.465 kb on + strand at 647.547 kb on + strand, within HGI48_RS03040 at 647.548 kb on - strand, within HGI48_RS03040 at 647.571 kb on + strand at 647.571 kb on + strand, within HGI48_RS03040 at 647.571 kb on + strand, within HGI48_RS03040 at 647.571 kb on + strand, within HGI48_RS03040 at 647.571 kb on + strand, within HGI48_RS03040 at 647.632 kb on + strand, within HGI48_RS03040 at 647.650 kb on - strand, within HGI48_RS03040 at 647.650 kb on - strand, within HGI48_RS03040 at 647.660 kb on + strand at 647.660 kb on + strand, within HGI48_RS03040 at 647.660 kb on + strand, within HGI48_RS03040 at 647.660 kb on + strand, within HGI48_RS03040 at 647.660 kb on + strand, within HGI48_RS03040 at 647.660 kb on + strand, within HGI48_RS03040 at 647.661 kb on - strand, within HGI48_RS03040 at 647.661 kb on - strand, within HGI48_RS03040 at 647.661 kb on - strand at 647.661 kb on - strand, within HGI48_RS03040 at 647.682 kb on + strand, within HGI48_RS03040 at 647.682 kb on + strand, within HGI48_RS03040 at 647.715 kb on + strand, within HGI48_RS03040 at 647.804 kb on + strand, within HGI48_RS03040 at 647.805 kb on - strand, within HGI48_RS03040 at 647.805 kb on - strand, within HGI48_RS03040 at 647.805 kb on - strand, within HGI48_RS03040 at 647.953 kb on + strand, within HGI48_RS03040 at 647.954 kb on - strand, within HGI48_RS03040 at 648.018 kb on - strand, within HGI48_RS03040 at 648.019 kb on + strand, within HGI48_RS03040 at 648.019 kb on + strand, within HGI48_RS03040 at 648.020 kb on - strand, within HGI48_RS03040 at 648.038 kb on + strand, within HGI48_RS03040 at 648.038 kb on + strand, within HGI48_RS03040 at 648.038 kb on + strand, within HGI48_RS03040 at 648.038 kb on + strand, within HGI48_RS03040 at 648.038 kb on + strand, within HGI48_RS03040 at 648.038 kb on + strand, within HGI48_RS03040 at 648.039 kb on - strand, within HGI48_RS03040 at 648.039 kb on - strand, within HGI48_RS03040 at 648.039 kb on - strand, within HGI48_RS03040 at 648.101 kb on + strand, within HGI48_RS03040 at 648.102 kb on - strand at 648.102 kb on - strand, within HGI48_RS03040 at 648.152 kb on + strand, within HGI48_RS03040 at 648.152 kb on + strand, within HGI48_RS03040 at 648.153 kb on - strand, within HGI48_RS03040 at 648.153 kb on - strand, within HGI48_RS03040 at 648.178 kb on - strand, within HGI48_RS03040 at 648.240 kb on - strand at 648.282 kb on - strand at 648.345 kb on - strand, within HGI48_RS03045 at 648.376 kb on + strand, within HGI48_RS03045 at 648.376 kb on + strand, within HGI48_RS03045 at 648.377 kb on - strand, within HGI48_RS03045
Per-strain Table
Position Strand Gene LocusTag Fraction LB remove 646,030 + HGI48_RS03025 0.23 +0.9 646,030 + +1.3 646,031 - HGI48_RS03025 0.23 -2.3 646,115 + HGI48_RS03025 0.42 -0.9 646,115 + HGI48_RS03025 0.42 -1.1 646,153 + HGI48_RS03025 0.50 -0.7 646,153 + HGI48_RS03025 0.50 +0.3 646,153 + +1.5 646,153 + HGI48_RS03025 0.50 -1.1 646,153 + HGI48_RS03025 0.50 -0.1 646,153 + HGI48_RS03025 0.50 -2.0 646,154 - HGI48_RS03025 0.50 -0.9 646,154 - HGI48_RS03025 0.50 -2.3 646,154 - HGI48_RS03025 0.50 +0.9 646,154 - HGI48_RS03025 0.50 -0.6 646,154 - HGI48_RS03025 0.50 -0.3 646,167 + HGI48_RS03025 0.53 +0.9 646,293 + +2.1 646,294 - HGI48_RS03025 0.82 -0.8 646,294 - HGI48_RS03025 0.82 -0.5 646,395 + -0.7 646,395 + -0.1 646,395 + +0.0 646,395 + -0.3 646,395 + -0.0 646,396 - +3.1 646,419 + -0.4 646,435 + -0.5 646,435 + -0.8 646,435 + -0.7 646,447 + -1.3 646,476 + +0.8 646,477 - -0.1 646,611 - +0.5 646,704 + HGI48_RS03030 0.39 +0.9 646,780 - HGI48_RS03030 0.53 -1.9 646,825 + HGI48_RS03030 0.61 +0.0 646,825 + HGI48_RS03030 0.61 -1.6 646,957 - HGI48_RS03030 0.86 +1.2 646,970 + HGI48_RS03030 0.88 +0.5 646,970 + HGI48_RS03030 0.88 -0.2 646,970 + HGI48_RS03030 0.88 +0.9 646,970 + HGI48_RS03030 0.88 -1.5 646,971 - HGI48_RS03030 0.89 +0.0 646,971 - HGI48_RS03030 0.89 -1.8 646,971 - HGI48_RS03030 0.89 -0.9 646,971 - HGI48_RS03030 0.89 -1.1 646,971 - -0.5 646,971 - HGI48_RS03030 0.89 -0.7 646,971 - HGI48_RS03030 0.89 +1.8 646,974 + HGI48_RS03030 0.89 -0.8 646,974 + HGI48_RS03030 0.89 -0.8 646,974 + HGI48_RS03030 0.89 +0.0 646,975 - HGI48_RS03030 0.89 +0.8 646,975 - HGI48_RS03030 0.89 -2.1 646,994 + -2.6 646,995 - -0.9 647,011 - +0.5 647,011 - +0.9 647,011 - -0.6 647,038 - +0.5 647,038 - +0.8 647,226 + HGI48_RS03035 0.56 +0.9 647,226 + HGI48_RS03035 0.56 -0.1 647,226 + HGI48_RS03035 0.56 +0.8 647,226 + HGI48_RS03035 0.56 -0.4 647,226 + HGI48_RS03035 0.56 +0.1 647,226 + -1.1 647,226 + HGI48_RS03035 0.56 +0.1 647,227 - HGI48_RS03035 0.57 -1.4 647,227 - HGI48_RS03035 0.57 +0.3 647,227 - HGI48_RS03035 0.57 +0.5 647,227 - HGI48_RS03035 0.57 +0.7 647,465 + +0.9 647,547 + HGI48_RS03040 0.19 +0.8 647,548 - HGI48_RS03040 0.19 -0.1 647,571 + +1.9 647,571 + HGI48_RS03040 0.22 +1.7 647,571 + HGI48_RS03040 0.22 -0.5 647,571 + HGI48_RS03040 0.22 -0.5 647,571 + HGI48_RS03040 0.22 +1.0 647,632 + HGI48_RS03040 0.28 -2.3 647,650 - HGI48_RS03040 0.30 -0.1 647,650 - HGI48_RS03040 0.30 +0.2 647,660 + -1.1 647,660 + HGI48_RS03040 0.31 -1.4 647,660 + HGI48_RS03040 0.31 -1.5 647,660 + HGI48_RS03040 0.31 +0.2 647,660 + HGI48_RS03040 0.31 -0.1 647,660 + HGI48_RS03040 0.31 +0.5 647,661 - HGI48_RS03040 0.31 -2.2 647,661 - HGI48_RS03040 0.31 -0.2 647,661 - +1.5 647,661 - HGI48_RS03040 0.31 -1.6 647,682 + HGI48_RS03040 0.34 +0.5 647,682 + HGI48_RS03040 0.34 +0.1 647,715 + HGI48_RS03040 0.37 -0.5 647,804 + HGI48_RS03040 0.47 -0.1 647,805 - HGI48_RS03040 0.47 +1.4 647,805 - HGI48_RS03040 0.47 +0.8 647,805 - HGI48_RS03040 0.47 -0.1 647,953 + HGI48_RS03040 0.64 -0.7 647,954 - HGI48_RS03040 0.64 -0.7 648,018 - HGI48_RS03040 0.71 +0.7 648,019 + HGI48_RS03040 0.71 -1.5 648,019 + HGI48_RS03040 0.71 +0.1 648,020 - HGI48_RS03040 0.71 -1.1 648,038 + HGI48_RS03040 0.73 -3.1 648,038 + HGI48_RS03040 0.73 +0.5 648,038 + HGI48_RS03040 0.73 +0.3 648,038 + HGI48_RS03040 0.73 -1.2 648,038 + HGI48_RS03040 0.73 -0.6 648,038 + HGI48_RS03040 0.73 -1.6 648,039 - HGI48_RS03040 0.73 +0.1 648,039 - HGI48_RS03040 0.73 -2.5 648,039 - HGI48_RS03040 0.73 -1.4 648,101 + HGI48_RS03040 0.80 -0.9 648,102 - +1.9 648,102 - HGI48_RS03040 0.80 -2.6 648,152 + HGI48_RS03040 0.85 -0.5 648,152 + HGI48_RS03040 0.85 -2.3 648,153 - HGI48_RS03040 0.86 -0.1 648,153 - HGI48_RS03040 0.86 -0.3 648,178 - HGI48_RS03040 0.88 +0.1 648,240 - -1.1 648,282 - -0.4 648,345 - HGI48_RS03045 0.11 -1.8 648,376 + HGI48_RS03045 0.16 +0.8 648,376 + HGI48_RS03045 0.16 -1.3 648,377 - HGI48_RS03045 0.17 +0.2
Or see this region's nucleotide sequence