Experiment: M9+glycerol
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DDA3937_RS20765 and DDA3937_RS20770 are separated by 97 nucleotides DDA3937_RS20770 and DDA3937_RS20775 overlap by 4 nucleotides
DDA3937_RS20765: DDA3937_RS20765 - AMP-binding protein, at 4,719,072 to 4,720,595
_RS20765
DDA3937_RS20770: DDA3937_RS20770 - VOC family protein, at 4,720,693 to 4,721,124
_RS20770
DDA3937_RS20775: DDA3937_RS20775 - acyl-CoA dehydrogenase, at 4,721,121 to 4,722,254
_RS20775
Position (kb) 4720
4721
4722 Strain fitness (log2 ratio) -4
-3
-2
-1
0
1
2
3
4 at 4719.719 kb on + strand, within DDA3937_RS20765 at 4719.720 kb on - strand, within DDA3937_RS20765 at 4719.720 kb on - strand, within DDA3937_RS20765 at 4719.723 kb on - strand, within DDA3937_RS20765 at 4719.788 kb on + strand, within DDA3937_RS20765 at 4719.810 kb on - strand, within DDA3937_RS20765 at 4719.810 kb on - strand, within DDA3937_RS20765 at 4719.853 kb on + strand, within DDA3937_RS20765 at 4719.945 kb on + strand, within DDA3937_RS20765 at 4719.946 kb on - strand, within DDA3937_RS20765 at 4719.946 kb on - strand, within DDA3937_RS20765 at 4719.946 kb on - strand, within DDA3937_RS20765 at 4719.982 kb on + strand, within DDA3937_RS20765 at 4719.983 kb on - strand, within DDA3937_RS20765 at 4720.015 kb on + strand, within DDA3937_RS20765 at 4720.016 kb on - strand, within DDA3937_RS20765 at 4720.144 kb on - strand, within DDA3937_RS20765 at 4720.147 kb on + strand, within DDA3937_RS20765 at 4720.147 kb on + strand, within DDA3937_RS20765 at 4720.147 kb on + strand, within DDA3937_RS20765 at 4720.148 kb on - strand, within DDA3937_RS20765 at 4720.148 kb on - strand, within DDA3937_RS20765 at 4720.148 kb on - strand, within DDA3937_RS20765 at 4720.148 kb on - strand, within DDA3937_RS20765 at 4720.200 kb on + strand, within DDA3937_RS20765 at 4720.200 kb on + strand, within DDA3937_RS20765 at 4720.200 kb on + strand, within DDA3937_RS20765 at 4720.200 kb on + strand, within DDA3937_RS20765 at 4720.200 kb on + strand, within DDA3937_RS20765 at 4720.204 kb on - strand, within DDA3937_RS20765 at 4720.204 kb on - strand, within DDA3937_RS20765 at 4720.224 kb on + strand, within DDA3937_RS20765 at 4720.268 kb on + strand, within DDA3937_RS20765 at 4720.269 kb on - strand, within DDA3937_RS20765 at 4720.277 kb on + strand, within DDA3937_RS20765 at 4720.277 kb on + strand, within DDA3937_RS20765 at 4720.278 kb on - strand, within DDA3937_RS20765 at 4720.278 kb on - strand, within DDA3937_RS20765 at 4720.278 kb on - strand, within DDA3937_RS20765 at 4720.278 kb on - strand, within DDA3937_RS20765 at 4720.290 kb on - strand, within DDA3937_RS20765 at 4720.342 kb on + strand, within DDA3937_RS20765 at 4720.376 kb on + strand, within DDA3937_RS20765 at 4720.377 kb on - strand, within DDA3937_RS20765 at 4720.393 kb on + strand, within DDA3937_RS20765 at 4720.394 kb on - strand, within DDA3937_RS20765 at 4720.394 kb on - strand, within DDA3937_RS20765 at 4720.394 kb on - strand, within DDA3937_RS20765 at 4720.399 kb on + strand, within DDA3937_RS20765 at 4720.399 kb on + strand, within DDA3937_RS20765 at 4720.400 kb on - strand, within DDA3937_RS20765 at 4720.400 kb on - strand, within DDA3937_RS20765 at 4720.400 kb on - strand, within DDA3937_RS20765 at 4720.476 kb on + strand at 4720.476 kb on + strand at 4720.476 kb on + strand at 4720.476 kb on + strand at 4720.477 kb on - strand at 4720.477 kb on - strand at 4720.477 kb on - strand at 4720.477 kb on - strand at 4720.477 kb on - strand at 4720.593 kb on + strand at 4720.594 kb on - strand at 4720.594 kb on - strand at 4720.594 kb on - strand at 4720.634 kb on + strand at 4720.657 kb on + strand at 4720.658 kb on - strand at 4720.666 kb on - strand at 4720.741 kb on - strand, within DDA3937_RS20770 at 4720.810 kb on + strand, within DDA3937_RS20770 at 4720.810 kb on + strand, within DDA3937_RS20770 at 4720.810 kb on + strand, within DDA3937_RS20770 at 4720.810 kb on + strand, within DDA3937_RS20770 at 4720.811 kb on - strand, within DDA3937_RS20770 at 4720.811 kb on - strand, within DDA3937_RS20770 at 4721.051 kb on - strand, within DDA3937_RS20770 at 4721.051 kb on - strand, within DDA3937_RS20770 at 4721.051 kb on - strand, within DDA3937_RS20770 at 4721.131 kb on - strand at 4721.131 kb on - strand at 4721.131 kb on - strand at 4721.206 kb on + strand at 4721.206 kb on + strand at 4721.206 kb on + strand at 4721.206 kb on + strand at 4721.206 kb on + strand at 4721.206 kb on + strand at 4721.207 kb on - strand at 4721.207 kb on - strand at 4721.207 kb on - strand at 4721.207 kb on - strand at 4721.207 kb on - strand at 4721.207 kb on - strand at 4721.207 kb on - strand at 4721.210 kb on + strand at 4721.210 kb on + strand at 4721.210 kb on + strand at 4721.211 kb on - strand at 4721.211 kb on - strand at 4721.245 kb on - strand, within DDA3937_RS20775 at 4721.267 kb on + strand, within DDA3937_RS20775 at 4721.268 kb on - strand, within DDA3937_RS20775 at 4721.268 kb on - strand, within DDA3937_RS20775 at 4721.365 kb on - strand, within DDA3937_RS20775 at 4721.365 kb on - strand, within DDA3937_RS20775 at 4721.379 kb on + strand, within DDA3937_RS20775 at 4721.379 kb on + strand, within DDA3937_RS20775 at 4721.379 kb on + strand, within DDA3937_RS20775 at 4721.379 kb on + strand, within DDA3937_RS20775 at 4721.379 kb on + strand, within DDA3937_RS20775 at 4721.379 kb on + strand, within DDA3937_RS20775 at 4721.380 kb on - strand, within DDA3937_RS20775 at 4721.380 kb on - strand, within DDA3937_RS20775 at 4721.380 kb on - strand, within DDA3937_RS20775 at 4721.608 kb on - strand, within DDA3937_RS20775 at 4721.608 kb on - strand, within DDA3937_RS20775 at 4721.608 kb on - strand, within DDA3937_RS20775
Per-strain Table
Position Strand Gene LocusTag Fraction M9+glycerol remove 4,719,719 + DDA3937_RS20765 0.42 -0.1 4,719,720 - DDA3937_RS20765 0.43 -1.7 4,719,720 - DDA3937_RS20765 0.43 +0.2 4,719,723 - DDA3937_RS20765 0.43 +0.5 4,719,788 + DDA3937_RS20765 0.47 +1.3 4,719,810 - DDA3937_RS20765 0.48 -1.5 4,719,810 - DDA3937_RS20765 0.48 -1.5 4,719,853 + DDA3937_RS20765 0.51 +0.0 4,719,945 + DDA3937_RS20765 0.57 +1.8 4,719,946 - DDA3937_RS20765 0.57 +0.1 4,719,946 - DDA3937_RS20765 0.57 +0.1 4,719,946 - DDA3937_RS20765 0.57 -2.5 4,719,982 + DDA3937_RS20765 0.60 -0.4 4,719,983 - DDA3937_RS20765 0.60 +0.7 4,720,015 + DDA3937_RS20765 0.62 +0.6 4,720,016 - DDA3937_RS20765 0.62 -1.3 4,720,144 - DDA3937_RS20765 0.70 +1.6 4,720,147 + DDA3937_RS20765 0.71 +1.9 4,720,147 + DDA3937_RS20765 0.71 -1.9 4,720,147 + DDA3937_RS20765 0.71 +2.2 4,720,148 - DDA3937_RS20765 0.71 -1.0 4,720,148 - DDA3937_RS20765 0.71 +1.3 4,720,148 - DDA3937_RS20765 0.71 -1.3 4,720,148 - DDA3937_RS20765 0.71 -0.7 4,720,200 + DDA3937_RS20765 0.74 -1.1 4,720,200 + DDA3937_RS20765 0.74 -1.5 4,720,200 + DDA3937_RS20765 0.74 +0.0 4,720,200 + DDA3937_RS20765 0.74 -2.3 4,720,200 + DDA3937_RS20765 0.74 +0.4 4,720,204 - DDA3937_RS20765 0.74 -1.4 4,720,204 - DDA3937_RS20765 0.74 -1.6 4,720,224 + DDA3937_RS20765 0.76 +0.3 4,720,268 + DDA3937_RS20765 0.78 -0.3 4,720,269 - DDA3937_RS20765 0.79 +1.0 4,720,277 + DDA3937_RS20765 0.79 -1.7 4,720,277 + DDA3937_RS20765 0.79 +0.1 4,720,278 - DDA3937_RS20765 0.79 +0.5 4,720,278 - DDA3937_RS20765 0.79 +1.4 4,720,278 - DDA3937_RS20765 0.79 -0.5 4,720,278 - DDA3937_RS20765 0.79 -2.1 4,720,290 - DDA3937_RS20765 0.80 +0.9 4,720,342 + DDA3937_RS20765 0.83 -0.5 4,720,376 + DDA3937_RS20765 0.86 +0.1 4,720,377 - DDA3937_RS20765 0.86 +2.5 4,720,393 + DDA3937_RS20765 0.87 +4.0 4,720,394 - DDA3937_RS20765 0.87 +0.9 4,720,394 - DDA3937_RS20765 0.87 -1.5 4,720,394 - DDA3937_RS20765 0.87 -0.7 4,720,399 + DDA3937_RS20765 0.87 +0.9 4,720,399 + DDA3937_RS20765 0.87 +0.4 4,720,400 - DDA3937_RS20765 0.87 -0.7 4,720,400 - DDA3937_RS20765 0.87 -1.9 4,720,400 - DDA3937_RS20765 0.87 -1.5 4,720,476 + -3.2 4,720,476 + -0.9 4,720,476 + -0.8 4,720,476 + -1.8 4,720,477 - -0.1 4,720,477 - +1.7 4,720,477 - -0.9 4,720,477 - +0.1 4,720,477 - -0.5 4,720,593 + -1.0 4,720,594 - -1.5 4,720,594 - -0.9 4,720,594 - +0.5 4,720,634 + -0.4 4,720,657 + -0.7 4,720,658 - +0.8 4,720,666 - -1.7 4,720,741 - DDA3937_RS20770 0.11 -0.5 4,720,810 + DDA3937_RS20770 0.27 -1.6 4,720,810 + DDA3937_RS20770 0.27 -0.8 4,720,810 + DDA3937_RS20770 0.27 -0.5 4,720,810 + DDA3937_RS20770 0.27 -1.5 4,720,811 - DDA3937_RS20770 0.27 -2.0 4,720,811 - DDA3937_RS20770 0.27 -2.0 4,721,051 - DDA3937_RS20770 0.83 -1.3 4,721,051 - DDA3937_RS20770 0.83 -1.0 4,721,051 - DDA3937_RS20770 0.83 +0.5 4,721,131 - +0.0 4,721,131 - -2.6 4,721,131 - -0.8 4,721,206 + -1.1 4,721,206 + +0.2 4,721,206 + -0.9 4,721,206 + +1.5 4,721,206 + -0.2 4,721,206 + +0.8 4,721,207 - -0.3 4,721,207 - -1.3 4,721,207 - -1.8 4,721,207 - -0.5 4,721,207 - +2.9 4,721,207 - +0.0 4,721,207 - -1.3 4,721,210 + -1.4 4,721,210 + -1.6 4,721,210 + -0.9 4,721,211 - -1.3 4,721,211 - +0.2 4,721,245 - DDA3937_RS20775 0.11 -1.1 4,721,267 + DDA3937_RS20775 0.13 +0.5 4,721,268 - DDA3937_RS20775 0.13 -1.5 4,721,268 - DDA3937_RS20775 0.13 +0.4 4,721,365 - DDA3937_RS20775 0.22 -2.3 4,721,365 - DDA3937_RS20775 0.22 -1.1 4,721,379 + DDA3937_RS20775 0.23 -0.2 4,721,379 + DDA3937_RS20775 0.23 -2.3 4,721,379 + DDA3937_RS20775 0.23 +4.4 4,721,379 + DDA3937_RS20775 0.23 -0.4 4,721,379 + DDA3937_RS20775 0.23 +0.2 4,721,379 + DDA3937_RS20775 0.23 -0.8 4,721,380 - DDA3937_RS20775 0.23 +1.9 4,721,380 - DDA3937_RS20775 0.23 -4.0 4,721,380 - DDA3937_RS20775 0.23 -1.8 4,721,608 - DDA3937_RS20775 0.43 -0.1 4,721,608 - DDA3937_RS20775 0.43 -2.1 4,721,608 - DDA3937_RS20775 0.43 +0.9
Or see this region's nucleotide sequence