Experiment: M9+glycerol
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DDA3937_RS20665 and DDA3937_RS20675 overlap by 4 nucleotides DDA3937_RS20675 and DDA3937_RS20680 are separated by 69 nucleotides
DDA3937_RS20665: DDA3937_RS20665 - glycoside hydrolase family 19 protein, at 4,699,204 to 4,701,582
_RS20665
DDA3937_RS20675: DDA3937_RS20675 - hypothetical protein, at 4,701,579 to 4,702,055
_RS20675
DDA3937_RS20680: DDA3937_RS20680 - hypothetical protein, at 4,702,125 to 4,702,868
_RS20680
Position (kb) 4701
4702
4703 Strain fitness (log2 ratio) -2
-1
0
1
2
3 at 4700.598 kb on + strand, within DDA3937_RS20665 at 4700.598 kb on + strand, within DDA3937_RS20665 at 4700.629 kb on - strand, within DDA3937_RS20665 at 4700.698 kb on - strand, within DDA3937_RS20665 at 4700.718 kb on + strand, within DDA3937_RS20665 at 4700.750 kb on - strand, within DDA3937_RS20665 at 4700.854 kb on - strand, within DDA3937_RS20665 at 4700.945 kb on - strand, within DDA3937_RS20665 at 4701.093 kb on + strand, within DDA3937_RS20665 at 4701.205 kb on + strand, within DDA3937_RS20665 at 4701.304 kb on + strand, within DDA3937_RS20665 at 4701.497 kb on + strand at 4701.544 kb on + strand at 4701.751 kb on + strand, within DDA3937_RS20675 at 4701.751 kb on + strand, within DDA3937_RS20675 at 4701.759 kb on + strand, within DDA3937_RS20675 at 4701.887 kb on - strand, within DDA3937_RS20675 at 4702.062 kb on - strand at 4702.104 kb on - strand at 4702.106 kb on + strand at 4702.106 kb on + strand at 4702.152 kb on - strand at 4702.152 kb on - strand at 4702.205 kb on - strand, within DDA3937_RS20680 at 4702.228 kb on + strand, within DDA3937_RS20680 at 4702.228 kb on + strand, within DDA3937_RS20680 at 4702.258 kb on - strand, within DDA3937_RS20680 at 4702.307 kb on - strand, within DDA3937_RS20680 at 4702.320 kb on - strand, within DDA3937_RS20680 at 4702.335 kb on - strand, within DDA3937_RS20680 at 4702.419 kb on - strand, within DDA3937_RS20680 at 4702.471 kb on - strand, within DDA3937_RS20680 at 4702.501 kb on - strand, within DDA3937_RS20680 at 4702.568 kb on + strand, within DDA3937_RS20680 at 4702.607 kb on + strand, within DDA3937_RS20680 at 4702.607 kb on + strand, within DDA3937_RS20680 at 4702.607 kb on + strand, within DDA3937_RS20680 at 4702.608 kb on - strand, within DDA3937_RS20680 at 4702.608 kb on - strand, within DDA3937_RS20680 at 4702.610 kb on - strand, within DDA3937_RS20680 at 4702.732 kb on + strand, within DDA3937_RS20680 at 4702.796 kb on + strand at 4702.797 kb on - strand at 4702.932 kb on - strand at 4703.002 kb on + strand at 4703.033 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction M9+glycerol remove 4,700,598 + DDA3937_RS20665 0.59 -2.7 4,700,598 + DDA3937_RS20665 0.59 -1.8 4,700,629 - DDA3937_RS20665 0.60 -2.2 4,700,698 - DDA3937_RS20665 0.63 -0.2 4,700,718 + DDA3937_RS20665 0.64 +0.3 4,700,750 - DDA3937_RS20665 0.65 -2.3 4,700,854 - DDA3937_RS20665 0.69 +0.6 4,700,945 - DDA3937_RS20665 0.73 +3.3 4,701,093 + DDA3937_RS20665 0.79 -0.5 4,701,205 + DDA3937_RS20665 0.84 -0.9 4,701,304 + DDA3937_RS20665 0.88 +0.9 4,701,497 + -1.8 4,701,544 + -0.5 4,701,751 + DDA3937_RS20675 0.36 -0.1 4,701,751 + DDA3937_RS20675 0.36 -1.0 4,701,759 + DDA3937_RS20675 0.38 -1.7 4,701,887 - DDA3937_RS20675 0.65 -2.1 4,702,062 - -0.1 4,702,104 - -0.7 4,702,106 + -0.3 4,702,106 + -0.1 4,702,152 - -0.7 4,702,152 - -1.5 4,702,205 - DDA3937_RS20680 0.11 -1.9 4,702,228 + DDA3937_RS20680 0.14 -0.8 4,702,228 + DDA3937_RS20680 0.14 -1.0 4,702,258 - DDA3937_RS20680 0.18 -0.6 4,702,307 - DDA3937_RS20680 0.24 -0.9 4,702,320 - DDA3937_RS20680 0.26 -1.6 4,702,335 - DDA3937_RS20680 0.28 +0.5 4,702,419 - DDA3937_RS20680 0.40 -1.2 4,702,471 - DDA3937_RS20680 0.47 -0.0 4,702,501 - DDA3937_RS20680 0.51 -0.8 4,702,568 + DDA3937_RS20680 0.60 -0.3 4,702,607 + DDA3937_RS20680 0.65 -0.7 4,702,607 + DDA3937_RS20680 0.65 -1.7 4,702,607 + DDA3937_RS20680 0.65 -0.7 4,702,608 - DDA3937_RS20680 0.65 -1.1 4,702,608 - DDA3937_RS20680 0.65 -0.7 4,702,610 - DDA3937_RS20680 0.65 -2.5 4,702,732 + DDA3937_RS20680 0.82 +1.6 4,702,796 + +1.9 4,702,797 - -0.9 4,702,932 - +1.6 4,703,002 + +1.5 4,703,033 - -0.4
Or see this region's nucleotide sequence