Strain Fitness in Dickeya dadantii 3937 around DDA3937_RS20385

Experiment: M9+glycerol

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	M9+glycerol
4,643,333	+		DDA3937_RS20380	0.66	-1.7
4,643,382	+		DDA3937_RS20380	0.68	-3.2
4,643,383	-		DDA3937_RS20380	0.68	-1.1
4,643,513	-		DDA3937_RS20380	0.74	+2.2
4,643,539	-				+1.3
4,643,610	+		DDA3937_RS20380	0.78	-0.1
4,643,610	+		DDA3937_RS20380	0.78	-0.6
4,643,610	+		DDA3937_RS20380	0.78	+0.2
4,643,611	-		DDA3937_RS20380	0.78	+0.2
4,643,611	-		DDA3937_RS20380	0.78	-0.4
4,643,736	+		DDA3937_RS20380	0.84	-0.4
4,643,736	+		DDA3937_RS20380	0.84	+0.3
4,643,736	+		DDA3937_RS20380	0.84	+1.3
4,643,736	+		DDA3937_RS20380	0.84	+1.2
4,643,736	+				-0.1
4,643,736	+		DDA3937_RS20380	0.84	-1.3
4,643,736	+		DDA3937_RS20380	0.84	-0.7
4,643,736	+		DDA3937_RS20380	0.84	-1.1
4,643,736	+		DDA3937_RS20380	0.84	+0.2
4,643,736	+		DDA3937_RS20380	0.84	-1.0
4,643,736	+		DDA3937_RS20380	0.84	+1.3
4,643,736	+		DDA3937_RS20380	0.84	-1.4
4,643,737	-		DDA3937_RS20380	0.84	-1.8
4,643,737	-		DDA3937_RS20380	0.84	-1.6
4,643,737	-		DDA3937_RS20380	0.84	-2.6
4,643,737	-		DDA3937_RS20380	0.84	+0.1
4,643,737	-		DDA3937_RS20380	0.84	-0.8
4,643,737	-		DDA3937_RS20380	0.84	-0.2
4,643,742	+		DDA3937_RS20380	0.84	-0.9
4,643,742	+		DDA3937_RS20380	0.84	-4.3
4,643,742	+		DDA3937_RS20380	0.84	-0.9
4,643,742	+		DDA3937_RS20380	0.84	-1.7
4,643,742	+		DDA3937_RS20380	0.84	-1.0
4,643,742	+		DDA3937_RS20380	0.84	+0.7
4,643,743	-		DDA3937_RS20380	0.84	-1.4
4,643,743	-		DDA3937_RS20380	0.84	+0.4
4,643,743	-		DDA3937_RS20380	0.84	+0.0
4,643,743	-		DDA3937_RS20380	0.84	-1.3
4,643,743	-		DDA3937_RS20380	0.84	-1.6
4,643,743	-		DDA3937_RS20380	0.84	-2.5
4,643,870	+		DDA3937_RS20380	0.89	+1.4
4,643,870	+		DDA3937_RS20380	0.89	-0.3
4,643,871	-		DDA3937_RS20380	0.89	-1.5
4,643,871	-		DDA3937_RS20380	0.89	+0.1
4,643,910	+				+0.3
4,643,911	-				-1.7
4,644,033	+				-1.0
4,644,033	+				-3.4
4,644,033	+				-1.3
4,644,034	-				+0.6
4,644,034	-				-2.2
4,644,034	-				-0.9
4,644,034	-				+1.2
4,644,099	-				-1.6
4,644,162	+				-0.7
4,644,162	+				-1.3
4,644,162	+				+1.1
4,644,167	+				-3.7
4,644,167	+				-0.3
4,644,167	+				-1.1
4,644,167	+				-0.4
4,644,167	+				-0.3
4,644,167	+				-1.5
4,644,167	+				-1.3
4,644,167	+				-1.0
4,644,167	+				-0.3
4,644,167	+				-0.5
4,644,168	-				-1.6
4,644,168	-				-0.7
4,644,168	-				-0.4
4,644,168	-				-1.2
4,644,168	-				-2.4
4,644,168	-				-1.4
4,644,168	-				+0.4
4,644,168	-				-0.4
4,644,168	-				+2.4
4,644,168	-				-2.7
4,644,168	-				+0.6
4,644,168	-				-0.1
4,644,170	+				-2.0
4,644,170	+				+1.7
4,644,170	+				-0.1
4,644,170	+				+0.7
4,644,171	-				-1.6
4,644,171	-				-1.2
4,644,171	-				+0.6
4,644,171	-				-1.9
4,644,171	-				-1.3
4,644,174	+				-2.3
4,644,174	+				-1.6
4,644,174	+				-0.6
4,644,174	+				-0.7
4,644,174	+				+2.0
4,644,175	-				-1.3
4,644,175	-				-0.6
4,644,175	-				+0.5
4,644,175	-				-0.3
4,644,187	+				-0.4
4,644,188	-				-0.3
4,644,225	+				-2.1
4,644,225	+				-1.1
4,644,226	-				-0.8
4,644,233	+				-1.6
4,644,233	+				-2.3
4,644,234	-				-2.4
4,644,234	-				+0.9
4,644,366	+		DDA3937_RS20385	0.16	-1.9
4,644,366	+		DDA3937_RS20385	0.16	-0.4
4,644,366	+		DDA3937_RS20385	0.16	-1.8
4,644,381	-		DDA3937_RS20385	0.18	-0.9
4,644,387	+		DDA3937_RS20385	0.18	-2.4
4,644,513	+		DDA3937_RS20385	0.32	-2.6
4,644,513	+		DDA3937_RS20385	0.32	-1.1
4,644,513	+				+1.3
4,644,514	-		DDA3937_RS20385	0.32	-1.4
4,644,701	+		DDA3937_RS20385	0.52	-0.9
4,644,701	+		DDA3937_RS20385	0.52	-0.9
4,644,701	+		DDA3937_RS20385	0.52	-0.1
4,644,702	-		DDA3937_RS20385	0.52	-1.5
4,644,702	-		DDA3937_RS20385	0.52	-1.7
4,644,746	+		DDA3937_RS20385	0.57	-1.5
4,644,747	-		DDA3937_RS20385	0.57	+0.2
4,644,750	+		DDA3937_RS20385	0.57	-1.1
4,644,750	+		DDA3937_RS20385	0.57	-1.3
4,644,750	+		DDA3937_RS20385	0.57	-2.0
4,644,750	+		DDA3937_RS20385	0.57	-1.6
4,644,751	-		DDA3937_RS20385	0.57	-0.8
4,644,751	-		DDA3937_RS20385	0.57	-1.4
4,644,751	-		DDA3937_RS20385	0.57	-1.8
4,644,751	-		DDA3937_RS20385	0.57	-1.4
4,644,867	-		DDA3937_RS20385	0.70	-1.3
4,644,874	-		DDA3937_RS20385	0.70	+0.9
4,644,874	-		DDA3937_RS20385	0.70	-0.1
4,644,878	+		DDA3937_RS20385	0.71	-3.3
4,644,879	-		DDA3937_RS20385	0.71	-1.3
4,644,879	-		DDA3937_RS20385	0.71	-2.1
4,645,006	+		DDA3937_RS20385	0.84	-1.6
4,645,007	-		DDA3937_RS20385	0.84	-2.4
4,645,150	+				+0.2
4,645,150	+				-2.0
4,645,150	+				+1.6
4,645,151	-				-1.9
4,645,249	+		DDA3937_RS22535	0.22	+1.9
4,645,250	-		DDA3937_RS22535	0.22	-0.9
4,645,284	+		DDA3937_RS22535	0.25	-0.7
4,645,285	-		DDA3937_RS22535	0.26	-0.6
4,645,285	-		DDA3937_RS22535	0.26	-0.4
4,645,285	-		DDA3937_RS22535	0.26	-0.8
4,645,299	+		DDA3937_RS22535	0.27	+0.7
4,645,299	+		DDA3937_RS22535	0.27	-2.3
4,645,300	-		DDA3937_RS22535	0.27	-0.8
4,645,425	+		DDA3937_RS22535	0.41	-0.5
4,645,425	+		DDA3937_RS22535	0.41	+0.9
4,645,480	+		DDA3937_RS22535	0.47	-1.1
4,645,480	+		DDA3937_RS22535	0.47	-1.6
4,645,480	+		DDA3937_RS22535	0.47	-1.3
4,645,480	+		DDA3937_RS22535	0.47	+1.2
4,645,480	+		DDA3937_RS22535	0.47	+0.1
4,645,481	-		DDA3937_RS22535	0.47	-1.4
4,645,481	-		DDA3937_RS22535	0.47	-2.3
4,645,481	-		DDA3937_RS22535	0.47	+3.3
4,645,481	-		DDA3937_RS22535	0.47	-1.7
4,645,481	-		DDA3937_RS22535	0.47	+1.5
4,645,481	-		DDA3937_RS22535	0.47	-1.2
4,645,481	-		DDA3937_RS22535	0.47	+1.3
4,645,482	+		DDA3937_RS22535	0.47	-1.0
4,645,483	-		DDA3937_RS22535	0.48	+0.8
4,645,483	-		DDA3937_RS22535	0.48	-0.8
4,645,566	+		DDA3937_RS22535	0.57	+1.1
4,645,567	-		DDA3937_RS22535	0.57	-1.1
4,645,567	-		DDA3937_RS22535	0.57	+0.6
4,645,650	+		DDA3937_RS22535	0.66	-1.1
4,645,651	-		DDA3937_RS22535	0.66	+0.0
4,645,665	+		DDA3937_RS22535	0.68	+1.3
4,645,665	+		DDA3937_RS22535	0.68	-2.3
4,645,666	-		DDA3937_RS22535	0.68	-0.1
4,645,666	-		DDA3937_RS22535	0.68	-0.8
4,645,703	+		DDA3937_RS22535	0.72	-1.6
4,645,704	-				+0.3
4,645,713	+		DDA3937_RS22535	0.73	+1.6
4,645,714	-		DDA3937_RS22535	0.73	+0.5
4,645,719	+		DDA3937_RS22535	0.74	-0.9
4,645,719	+		DDA3937_RS22535	0.74	+1.9
4,645,720	-		DDA3937_RS22535	0.74	+0.3
4,645,720	-		DDA3937_RS22535	0.74	-0.8
4,645,723	+		DDA3937_RS22535	0.74	+0.3
4,645,723	+		DDA3937_RS22535	0.74	+0.4
4,645,723	+		DDA3937_RS22535	0.74	-1.3
4,645,740	+		DDA3937_RS22535	0.76	-1.3
4,645,740	+		DDA3937_RS22535	0.76	+0.2
4,645,740	+		DDA3937_RS22535	0.76	-2.5
4,645,740	+		DDA3937_RS22535	0.76	-1.4
4,645,740	+		DDA3937_RS22535	0.76	+1.9
4,645,740	+		DDA3937_RS22535	0.76	-0.8
4,645,740	+		DDA3937_RS22535	0.76	+0.9
4,645,740	+		DDA3937_RS22535	0.76	-2.5
4,645,741	-		DDA3937_RS22535	0.76	-1.1
4,645,741	-		DDA3937_RS22535	0.76	+0.3
4,645,741	-		DDA3937_RS22535	0.76	-0.8
4,645,741	-		DDA3937_RS22535	0.76	-0.9
4,645,741	-		DDA3937_RS22535	0.76	-2.2
4,645,741	-		DDA3937_RS22535	0.76	+0.1
4,645,741	-		DDA3937_RS22535	0.76	+1.1
4,645,767	-		DDA3937_RS22535	0.79	+0.3
4,645,767	-		DDA3937_RS22535	0.79	-1.2
4,645,776	+		DDA3937_RS22535	0.80	-0.8
4,645,776	+		DDA3937_RS22535	0.80	-0.9
4,645,777	-		DDA3937_RS22535	0.80	+1.3
4,645,777	-		DDA3937_RS22535	0.80	+1.2
4,645,777	-		DDA3937_RS22535	0.80	-1.3
4,645,777	-		DDA3937_RS22535	0.80	-2.0
4,645,800	+		DDA3937_RS22535	0.83	+0.1
4,645,874	-				+0.3
4,645,893	+				+1.9
4,645,894	-				-2.4
4,645,894	-				-0.4
4,645,969	+				+1.0
4,645,969	+				+0.6
4,645,970	-				-0.7
4,645,970	-				-0.4
4,645,971	+				+1.8
4,645,971	+				-0.1
4,645,972	-				-0.9
4,645,978	+				-0.4
4,645,995	+				-0.3
4,645,995	+				-1.2
4,645,995	+				-2.7
4,645,995	+				-1.7
4,645,995	+				-1.1
4,645,995	+				+0.9
4,645,996	-				-1.6
4,646,004	+				-2.1
4,646,004	+				+1.2
4,646,005	-				-0.5
4,646,106	+				+0.6
4,646,106	+				-1.3
4,646,107	-				-1.0
4,646,109	+				+1.5
4,646,109	+				-1.3
4,646,109	+				+0.0
4,646,109	+				+1.6
4,646,110	-				+0.1
4,646,110	-				-1.8
4,646,124	+				-1.7
4,646,124	+				-0.4
4,646,124	+				+0.5
4,646,125	-				+0.3
4,646,125	-				-1.9
4,646,126	+		DDA3937_RS20395	0.10	+0.3
4,646,126	+		DDA3937_RS20395	0.10	+0.7
4,646,126	+		DDA3937_RS20395	0.10	+0.9
4,646,126	+		DDA3937_RS20395	0.10	-1.8
4,646,127	-		DDA3937_RS20395	0.10	-1.0
4,646,127	-		DDA3937_RS20395	0.10	-0.1
4,646,127	-		DDA3937_RS20395	0.10	-3.3
4,646,127	-		DDA3937_RS20395	0.10	-1.2
4,646,127	-		DDA3937_RS20395	0.10	-1.3
4,646,127	-		DDA3937_RS20395	0.10	-0.9
4,646,127	-		DDA3937_RS20395	0.10	+0.3
4,646,127	-		DDA3937_RS20395	0.10	-1.8