Experiment: M9+glycerol
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DDA3937_RS18000 and DDA3937_RS18005 are separated by 97 nucleotides DDA3937_RS18005 and DDA3937_RS18010 are separated by 27 nucleotides DDA3937_RS18010 and DDA3937_RS18015 are separated by 16 nucleotides
DDA3937_RS18000: DDA3937_RS18000 - preprotein translocase subunit SecA, at 4,107,073 to 4,109,760
_RS18000
DDA3937_RS18005: DDA3937_RS18005 - secA regulator SecM, at 4,109,858 to 4,110,361
_RS18005
DDA3937_RS18010: DDA3937_RS18010 - DUF721 domain-containing protein, at 4,110,389 to 4,110,910
_RS18010
DDA3937_RS18015: DDA3937_RS18015 - UDP-3-O-acyl-N-acetylglucosamine deacetylase, at 4,110,927 to 4,111,844
_RS18015
Position (kb)
4110
4111 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 4109.823 kb on - strand at 4109.851 kb on - strand at 4110.015 kb on - strand at 4110.071 kb on - strand, within DDA3937_RS18005 at 4110.190 kb on - strand, within DDA3937_RS18005 at 4110.190 kb on - strand, within DDA3937_RS18005 at 4110.236 kb on - strand, within DDA3937_RS18005 at 4110.236 kb on - strand, within DDA3937_RS18005 at 4110.319 kb on - strand at 4110.319 kb on - strand at 4110.807 kb on + strand, within DDA3937_RS18010 at 4110.886 kb on + strand at 4110.886 kb on + strand at 4110.887 kb on - strand at 4110.887 kb on - strand at 4110.914 kb on + strand at 4110.914 kb on + strand at 4110.914 kb on + strand at 4110.914 kb on + strand at 4110.914 kb on + strand at 4110.914 kb on + strand at 4110.914 kb on + strand at 4110.914 kb on + strand at 4110.915 kb on - strand at 4110.915 kb on - strand at 4110.915 kb on - strand at 4110.915 kb on - strand at 4110.915 kb on - strand at 4110.915 kb on - strand at 4110.915 kb on - strand at 4110.915 kb on - strand at 4110.915 kb on - strand at 4110.915 kb on - strand at 4110.915 kb on - strand at 4110.915 kb on - strand at 4110.915 kb on - strand at 4110.915 kb on - strand at 4110.915 kb on - strand at 4110.915 kb on - strand at 4110.918 kb on + strand at 4110.918 kb on + strand at 4110.918 kb on + strand at 4110.919 kb on - strand at 4110.919 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction M9+glycerol remove 4,109,823 - -0.2 4,109,851 - +0.6 4,110,015 - +1.2 4,110,071 - DDA3937_RS18005 0.42 -0.2 4,110,190 - DDA3937_RS18005 0.66 -0.0 4,110,190 - DDA3937_RS18005 0.66 +0.3 4,110,236 - DDA3937_RS18005 0.75 -0.2 4,110,236 - DDA3937_RS18005 0.75 +1.3 4,110,319 - +0.1 4,110,319 - -1.4 4,110,807 + DDA3937_RS18010 0.80 -1.4 4,110,886 + +0.8 4,110,886 + -0.2 4,110,887 - -0.3 4,110,887 - -0.1 4,110,914 + +0.5 4,110,914 + -3.4 4,110,914 + +0.7 4,110,914 + -0.6 4,110,914 + -1.0 4,110,914 + -1.2 4,110,914 + -0.1 4,110,914 + -1.2 4,110,915 - +0.9 4,110,915 - +0.2 4,110,915 - +0.2 4,110,915 - -1.2 4,110,915 - -0.6 4,110,915 - -1.4 4,110,915 - -1.6 4,110,915 - -1.0 4,110,915 - -0.6 4,110,915 - -0.3 4,110,915 - +0.7 4,110,915 - +0.8 4,110,915 - +2.0 4,110,915 - -0.5 4,110,915 - +1.3 4,110,915 - -0.0 4,110,918 + +0.2 4,110,918 + -3.0 4,110,918 + -0.6 4,110,919 - -1.5 4,110,919 - -0.7
Or see this region's nucleotide sequence