Strain Fitness in Dickeya dadantii 3937 around DDA3937_RS16945

Experiment: M9+glycerol

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	M9+glycerol
3,849,688	+		DDA3937_RS16940	0.46	-1.8
3,849,689	-		DDA3937_RS16940	0.46	-2.0
3,849,689	-		DDA3937_RS16940	0.46	-1.4
3,849,771	-		DDA3937_RS16940	0.51	-0.9
3,849,785	+		DDA3937_RS16940	0.52	-1.7
3,849,785	+		DDA3937_RS16940	0.52	-0.7
3,849,785	+		DDA3937_RS16940	0.52	-0.2
3,849,786	-		DDA3937_RS16940	0.52	-0.4
3,849,787	+		DDA3937_RS16940	0.52	-1.4
3,849,787	+		DDA3937_RS16940	0.52	-2.7
3,849,787	+		DDA3937_RS16940	0.52	-2.7
3,849,787	+		DDA3937_RS16940	0.52	-1.2
3,849,788	-		DDA3937_RS16940	0.52	-1.9
3,849,788	-		DDA3937_RS16940	0.52	-1.4
3,849,861	+		DDA3937_RS16940	0.56	-3.3
3,849,861	+		DDA3937_RS16940	0.56	+0.6
3,849,861	+		DDA3937_RS16940	0.56	-1.5
3,849,861	+		DDA3937_RS16940	0.56	-2.9
3,849,861	+		DDA3937_RS16940	0.56	+0.1
3,849,861	+		DDA3937_RS16940	0.56	+0.1
3,849,861	+		DDA3937_RS16940	0.56	-1.5
3,849,862	-		DDA3937_RS16940	0.56	-1.0
3,849,862	-		DDA3937_RS16940	0.56	-0.5
3,849,862	-		DDA3937_RS16940	0.56	-1.0
3,849,862	-		DDA3937_RS16940	0.56	-1.2
3,849,862	-		DDA3937_RS16940	0.56	+0.3
3,849,862	-		DDA3937_RS16940	0.56	-0.9
3,849,862	-		DDA3937_RS16940	0.56	-1.5
3,849,866	+		DDA3937_RS16940	0.56	-1.5
3,849,866	+		DDA3937_RS16940	0.56	-1.4
3,849,867	-		DDA3937_RS16940	0.56	-0.4
3,849,887	+		DDA3937_RS16940	0.58	-0.7
3,849,982	+		DDA3937_RS16940	0.63	-1.4
3,849,983	-		DDA3937_RS16940	0.63	-1.2
3,849,983	-		DDA3937_RS16940	0.63	+1.1
3,849,983	-		DDA3937_RS16940	0.63	-2.2
3,850,102	+		DDA3937_RS16940	0.70	-1.7
3,850,102	+		DDA3937_RS16940	0.70	-1.5
3,850,103	-		DDA3937_RS16940	0.70	-1.7
3,850,103	-		DDA3937_RS16940	0.70	+1.3
3,850,288	+		DDA3937_RS16940	0.81	-2.1
3,850,289	-		DDA3937_RS16940	0.81	-1.4
3,850,441	+		DDA3937_RS16940	0.90	-0.9
3,850,441	+		DDA3937_RS16940	0.90	-1.2
3,850,441	+		DDA3937_RS16940	0.90	+0.1
3,850,441	+		DDA3937_RS16940	0.90	-2.4
3,850,441	+		DDA3937_RS16940	0.90	+2.2
3,850,441	+		DDA3937_RS16940	0.90	-1.2
3,850,441	+		DDA3937_RS16940	0.90	-1.3
3,850,441	+		DDA3937_RS16940	0.90	-1.5
3,850,442	-				+0.1
3,850,442	-				-2.3
3,850,442	-				-0.9
3,850,442	-				+0.8
3,850,442	-				-2.1
3,850,442	-				-1.2
3,850,535	-				-3.0
3,850,600	+				-0.2
3,850,600	+				-0.7
3,850,600	+				-2.8
3,850,614	+				-3.2
3,850,614	+				-3.2
3,850,614	+				-0.2
3,850,615	-				-1.6
3,850,615	-				-0.2
3,850,617	+				+0.9
3,850,617	+				-0.4
3,850,617	+				+0.1
3,850,617	+				-0.4
3,850,617	+				-1.8
3,850,618	-				+0.2
3,850,618	-				-1.4
3,850,618	-				+0.6
3,850,618	-				-1.1
3,850,618	-				-1.1
3,850,618	-				-1.8
3,850,727	+				-0.7
3,850,727	+				-2.0
3,850,728	-				-1.3
3,850,728	-				-0.7
3,850,764	+				-1.3
3,850,764	+				-2.2
3,850,764	+				-2.3
3,850,765	-				-0.1
3,850,765	-				-0.9
3,850,765	-				-0.0
3,850,765	-				-0.3
3,850,765	-				-1.5
3,850,765	-				-1.8
3,850,765	-				+0.0
3,850,765	-				+0.1
3,850,765	-				-0.8
3,850,765	-				-2.2
3,850,765	-				-0.7
3,850,765	-				-1.3
3,850,765	-				-0.1
3,850,768	+				-1.9
3,850,769	-				-1.3
3,850,769	-				-1.2
3,850,769	-				-0.9
3,850,769	-				-1.4
3,850,829	+		DDA3937_RS16945	0.12	-1.1
3,850,830	-		DDA3937_RS16945	0.12	-0.8
3,850,830	-		DDA3937_RS16945	0.12	-0.2
3,850,834	-		DDA3937_RS16945	0.12	-0.9
3,850,894	+		DDA3937_RS16945	0.15	-1.8
3,850,899	+		DDA3937_RS16945	0.16	-0.9
3,850,899	+		DDA3937_RS16945	0.16	-1.2
3,850,899	+		DDA3937_RS16945	0.16	-1.9
3,850,900	-		DDA3937_RS16945	0.16	-0.0
3,850,900	-		DDA3937_RS16945	0.16	-1.5
3,850,921	-		DDA3937_RS16945	0.17	-0.4
3,851,002	+		DDA3937_RS16945	0.21	-1.6
3,851,003	-		DDA3937_RS16945	0.21	-0.7
3,851,003	-		DDA3937_RS16945	0.21	-1.2
3,851,143	-		DDA3937_RS16945	0.29	-2.9
3,851,178	+		DDA3937_RS16945	0.31	-0.9
3,851,178	+		DDA3937_RS16945	0.31	-2.3
3,851,178	+		DDA3937_RS16945	0.31	-0.0
3,851,178	+		DDA3937_RS16945	0.31	+0.4
3,851,179	-		DDA3937_RS16945	0.31	-0.0
3,851,179	-		DDA3937_RS16945	0.31	-2.1
3,851,250	+		DDA3937_RS16945	0.35	-1.9
3,851,250	+		DDA3937_RS16945	0.35	-2.2
3,851,342	-		DDA3937_RS16945	0.40	-1.5
3,851,360	+		DDA3937_RS16945	0.41	+0.1
3,851,418	+		DDA3937_RS16945	0.44	-1.5
3,851,418	+		DDA3937_RS16945	0.44	-0.4
3,851,418	+		DDA3937_RS16945	0.44	-0.7
3,851,418	+		DDA3937_RS16945	0.44	-2.2
3,851,418	+		DDA3937_RS16945	0.44	-2.3
3,851,418	+		DDA3937_RS16945	0.44	-1.7
3,851,422	+		DDA3937_RS16945	0.44	-3.5
3,851,422	+		DDA3937_RS16945	0.44	-0.1
3,851,574	+		DDA3937_RS16945	0.53	-2.1
3,851,575	-		DDA3937_RS16945	0.53	-0.7
3,851,575	-		DDA3937_RS16945	0.53	-0.7
3,851,663	-		DDA3937_RS16945	0.58	-0.3
3,851,703	+		DDA3937_RS16945	0.60	-1.4
3,851,704	-		DDA3937_RS16945	0.60	-0.9
3,851,704	-		DDA3937_RS16945	0.60	-2.5
3,851,704	-		DDA3937_RS16945	0.60	-1.2
3,851,704	-		DDA3937_RS16945	0.60	+0.1
3,851,704	-		DDA3937_RS16945	0.60	-1.2
3,851,722	-		DDA3937_RS16945	0.61	-1.2
3,851,722	-		DDA3937_RS16945	0.61	-1.3
3,851,895	-		DDA3937_RS16945	0.70	+0.1
3,851,946	+		DDA3937_RS16945	0.73	+0.7
3,851,947	-		DDA3937_RS16945	0.73	-1.5
3,851,947	-		DDA3937_RS16945	0.73	-1.0
3,852,115	+		DDA3937_RS16945	0.82	-2.1
3,852,118	-		DDA3937_RS16945	0.83	-1.2
3,852,118	-		DDA3937_RS16945	0.83	+1.0
3,852,226	+		DDA3937_RS16945	0.88	-1.5
3,852,245	+		DDA3937_RS16945	0.89	-1.8
3,852,322	-				-0.0
3,852,491	+				-1.1
3,852,509	-				+1.7
3,852,525	+				-1.4
3,852,525	+				-1.2
3,852,525	+				-1.7
3,852,526	-				-1.0
3,852,526	-				+1.3
3,852,527	+				-1.3
3,852,527	+				+0.1
3,852,527	+				-0.5
3,852,527	+				-0.5
3,852,527	+				-1.1
3,852,527	+				-1.9
3,852,527	+				-0.6
3,852,527	+				-1.7
3,852,527	+				-0.5
3,852,527	+				+1.1
3,852,527	+				-1.1
3,852,528	-				-0.1
3,852,528	-				-0.6
3,852,528	-				+1.2
3,852,528	-				+1.4
3,852,528	-				-3.0
3,852,528	-				-0.3
3,852,528	-				+3.1
3,852,528	-				+1.7
3,852,528	-				+3.4
3,852,528	-				+0.2
3,852,528	-				-0.9
3,852,532	+				-0.9
3,852,532	+				-3.0
3,852,532	+				-1.0
3,852,533	-				+2.3
3,852,547	+				-0.8
3,852,554	+				-0.5
3,852,554	+				-0.2
3,852,555	-				-1.4
3,852,555	-				+0.3
3,852,575	+				-1.2
3,852,576	-				-0.7
3,852,592	-				-1.8
3,852,623	-				+0.8
3,852,623	-				+0.1
3,852,655	+				-2.4
3,852,656	-				-1.8
3,852,660	+				-0.4
3,852,661	-				+2.0
3,852,692	-				+0.8
3,852,692	-				-1.3
3,852,693	+				+2.5
3,852,693	+				-1.2
3,852,694	-				-1.5
3,852,728	+				+0.2
3,852,728	+				-1.5
3,852,729	-				+0.1
3,852,729	-				-0.4
3,852,729	-				-0.4
3,852,729	-				+1.8
3,852,729	-				-2.9
3,852,768	-				+0.6
3,852,940	-		DDA3937_RS16950	0.12	-0.9
3,852,986	-		DDA3937_RS16950	0.15	-0.9
3,852,988	-		DDA3937_RS16950	0.15	+0.3
3,853,096	-		DDA3937_RS16950	0.21	-1.5
3,853,111	+		DDA3937_RS16950	0.22	-0.4
3,853,111	+		DDA3937_RS16950	0.22	-0.2
3,853,111	+		DDA3937_RS16950	0.22	+0.1
3,853,112	-		DDA3937_RS16950	0.22	-0.4
3,853,112	-		DDA3937_RS16950	0.22	-0.2
3,853,112	-		DDA3937_RS16950	0.22	+0.1
3,853,227	-		DDA3937_RS16950	0.29	-0.9
3,853,382	-		DDA3937_RS16950	0.38	+1.5
3,853,382	-		DDA3937_RS16950	0.38	-1.2
3,853,382	-		DDA3937_RS16950	0.38	+1.2
3,853,382	-		DDA3937_RS16950	0.38	+0.7