Strain Fitness in Dickeya dadantii 3937 around DDA3937_RS15015

Experiment: M9+glycerol

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	M9+glycerol
3,445,896	+				-2.0
3,445,896	+				-0.1
3,445,897	-				+0.8
3,445,897	-				-0.9
3,445,897	-				+0.1
3,445,897	-				-0.6
3,445,897	-				-0.7
3,445,897	-				-0.4
3,445,909	-				+0.9
3,445,909	-				+0.9
3,445,909	-				-1.0
3,445,949	+				-0.1
3,445,950	-				+0.9
3,445,950	-				-0.6
3,445,951	+				+1.8
3,445,951	+				+0.5
3,445,951	+				+0.1
3,445,951	+				+0.5
3,445,952	-				-1.3
3,445,952	-				-1.8
3,445,952	-				+2.3
3,445,961	+				-2.3
3,445,963	+				-2.4
3,445,963	+				+0.0
3,445,964	-				+1.3
3,445,964	-				-1.4
3,445,964	-				-0.1
3,446,074	+				+1.5
3,446,074	+				-1.3
3,446,074	+				-1.3
3,446,074	+				-0.5
3,446,075	-				-1.4
3,446,075	-				-1.1
3,446,077	-				-0.6
3,446,144	+				-1.7
3,446,145	-				-0.1
3,446,145	-				-2.1
3,446,145	-				-1.9
3,446,448	+				-1.2
3,446,448	+				+0.2
3,446,453	+				-0.8
3,446,584	+				+1.1
3,446,584	+				-0.6
3,446,584	+				-0.3
3,446,586	+				-1.5
3,446,586	+				+1.5
3,446,586	+				-1.1
3,446,586	+				-1.6
3,446,587	-				-1.0
3,446,627	-				+1.8
3,446,635	+				+2.1
3,446,635	+				-0.8
3,446,636	-				+0.5
3,446,646	+				+0.9
3,446,646	+				+0.7
3,446,646	+				-0.0
3,446,646	+				+1.0
3,446,646	+				-0.9
3,446,646	+				+1.0
3,446,646	+				-2.5
3,446,646	+				-1.0
3,446,646	+				+0.2
3,446,646	+				-1.0
3,446,646	+				-0.4
3,446,646	+				+1.1
3,446,646	+				-0.8
3,446,646	+				-1.7
3,446,647	-				+0.3
3,446,647	-				+0.3
3,446,647	-				-1.9
3,446,647	-				-0.5
3,446,647	-				+1.1
3,446,647	-				-1.4
3,446,647	-				+0.4
3,446,647	-				-1.4
3,446,647	-				-0.2
3,446,647	-				-0.1
3,446,647	-				+0.6
3,446,647	-				+0.0
3,446,647	-				-1.6
3,446,647	-				-0.3
3,446,647	-				-2.5
3,446,648	+				+0.8
3,446,648	+				-0.8
3,446,648	+				-0.6
3,446,648	+				+1.1
3,446,648	+				+3.3
3,446,648	+				-0.7
3,446,648	+				-0.8
3,446,648	+				-0.7
3,446,648	+				-0.8
3,446,648	+				-1.8
3,446,648	+				-1.2
3,446,648	+				-0.8
3,446,648	+				-2.5
3,446,648	+				+3.0
3,446,649	-				-1.0
3,446,649	-				+0.9
3,446,649	-				-2.3
3,446,649	-				-1.3
3,446,649	-				-1.3
3,446,649	-				-1.3
3,446,649	-				-1.4
3,446,649	-				+0.2
3,446,650	+				-0.3
3,446,650	+				+1.1
3,446,650	+				-1.2
3,446,651	-				+0.9
3,446,651	-				+0.9
3,446,651	-				+0.3
3,446,684	+				+0.8
3,446,687	+				-1.3
3,446,687	+				+0.4
3,446,688	-				-1.8
3,446,688	-				-0.3
3,446,688	-				-1.3
3,446,839	-		DDA3937_RS15015	0.24	-1.5
3,446,839	-		DDA3937_RS15015	0.24	+1.6
3,446,861	+		DDA3937_RS15015	0.27	-0.6
3,446,892	+		DDA3937_RS15015	0.31	-0.8
3,446,892	+		DDA3937_RS15015	0.31	-0.7
3,446,893	-		DDA3937_RS15015	0.31	-0.7
3,446,929	-		DDA3937_RS15015	0.36	+2.0
3,446,929	-		DDA3937_RS15015	0.36	+1.1
3,446,929	-		DDA3937_RS15015	0.36	-1.0
3,446,933	+		DDA3937_RS15015	0.36	-1.1
3,446,933	+		DDA3937_RS15015	0.36	-0.5
3,446,933	+		DDA3937_RS15015	0.36	-0.5
3,446,933	+		DDA3937_RS15015	0.36	-0.0
3,446,934	-		DDA3937_RS15015	0.36	-0.5
3,446,934	-		DDA3937_RS15015	0.36	-0.9
3,446,934	-		DDA3937_RS15015	0.36	-1.5
3,446,937	+		DDA3937_RS15015	0.37	-0.0
3,446,938	-		DDA3937_RS15015	0.37	+1.1
3,446,938	-		DDA3937_RS15015	0.37	+0.1
3,446,938	-		DDA3937_RS15015	0.37	-0.3
3,446,938	-		DDA3937_RS15015	0.37	-1.0
3,447,076	-				-0.0
3,447,076	-		DDA3937_RS15015	0.55	-1.6
3,447,098	+		DDA3937_RS15015	0.58	-1.5
3,447,102	+		DDA3937_RS15015	0.58	+1.5
3,447,128	+		DDA3937_RS15015	0.62	+0.5
3,447,128	+		DDA3937_RS15015	0.62	-0.9
3,447,128	+		DDA3937_RS15015	0.62	-2.0
3,447,129	-		DDA3937_RS15015	0.62	-2.2
3,447,144	+		DDA3937_RS15015	0.64	-0.0
3,447,144	+		DDA3937_RS15015	0.64	-0.7
3,447,145	-		DDA3937_RS15015	0.64	-0.2
3,447,169	-		DDA3937_RS15015	0.67	+1.4
3,447,179	+		DDA3937_RS15015	0.68	-0.6
3,447,179	+		DDA3937_RS15015	0.68	-0.3
3,447,180	-		DDA3937_RS15015	0.68	+0.5
3,447,180	-		DDA3937_RS15015	0.68	-1.1
3,447,192	+		DDA3937_RS15015	0.70	-1.5
3,447,192	+		DDA3937_RS15015	0.70	+0.7
3,447,193	-		DDA3937_RS15015	0.70	-2.9
3,447,193	-		DDA3937_RS15015	0.70	-2.0
3,447,273	+		DDA3937_RS15015	0.81	-0.0
3,447,274	-		DDA3937_RS15015	0.81	-1.3
3,447,397	+				+2.5
3,447,397	+				+1.2
3,447,397	+				-0.0
3,447,415	-				+2.1
3,447,435	+				-0.7
3,447,435	+				+0.2
3,447,435	+				-0.9
3,447,435	+				-0.5
3,447,439	+				-0.6
3,447,440	-				-1.0
3,447,463	+				-0.8
3,447,464	-				-1.6
3,447,517	+				-1.6
3,447,517	+				-1.4
3,447,517	+				-0.4
3,447,517	+				+1.3
3,447,517	+				+1.3
3,447,517	+				-0.0
3,447,517	+				+0.3
3,447,518	-				-0.3
3,447,518	-				+1.9
3,447,521	+				-1.3
3,447,521	+				-0.8
3,447,521	+				-1.5
3,447,522	-				-1.6
3,447,522	-				-2.9
3,447,522	-				+0.6
3,447,547	+				+0.0
3,447,548	-				-1.6
3,447,559	-				-1.0
3,447,564	+				-0.0
3,447,564	+				-1.3
3,447,565	-				+0.4
3,447,565	-				+1.1
3,447,565	-				-0.3
3,447,565	-				-0.2
3,447,565	-				+2.1
3,447,574	+				-0.0
3,447,602	+				-0.4
3,447,644	-				+1.8
3,447,644	-				-1.5
3,447,666	-				-0.3
3,447,697	+				-0.7
3,447,698	-				-1.1
3,447,699	+				+0.3
3,447,700	-				-0.8
3,447,721	+				-0.6
3,447,721	+				-1.0
3,447,821	+				-0.0
3,447,821	+				-1.1
3,447,822	-				-1.8
3,447,822	-				-1.7
3,447,997	-		DDA3937_RS15020	0.32	-0.5
3,448,189	-		DDA3937_RS15020	0.58	-0.9
3,448,189	-		DDA3937_RS15020	0.58	-0.8
3,448,193	+		DDA3937_RS15020	0.58	-2.4
3,448,194	-		DDA3937_RS15020	0.59	-0.5
3,448,194	-		DDA3937_RS15020	0.59	+2.2
3,448,194	-		DDA3937_RS15020	0.59	-2.6
3,448,212	+		DDA3937_RS15020	0.61	+3.4
3,448,213	-		DDA3937_RS15020	0.61	+0.5
3,448,229	+		DDA3937_RS15020	0.63	+0.6
3,448,256	+		DDA3937_RS15020	0.67	-0.3
3,448,257	-		DDA3937_RS15020	0.67	-0.9
3,448,257	-		DDA3937_RS15020	0.67	-0.0
3,448,282	+		DDA3937_RS15020	0.70	-0.5
3,448,283	-		DDA3937_RS15020	0.71	-0.0
3,448,295	+		DDA3937_RS15020	0.72	-0.2
3,448,295	+		DDA3937_RS15020	0.72	+0.8
3,448,295	+		DDA3937_RS15020	0.72	+0.1
3,448,296	-		DDA3937_RS15020	0.72	+0.0