Strain Fitness in Dickeya dadantii 3937 around DDA3937_RS13480

Experiment: M9+glycerol

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	M9+glycerol
3,071,922	+		DDA3937_RS13470	0.24	+2.7
3,071,922	+		DDA3937_RS13470	0.24	+4.1
3,071,922	+		DDA3937_RS13470	0.24	+4.2
3,071,922	+		DDA3937_RS13470	0.24	+1.7
3,071,922	+		DDA3937_RS13470	0.24	+3.1
3,071,922	+		DDA3937_RS13470	0.24	+2.3
3,071,923	-		DDA3937_RS13470	0.24	+4.5
3,071,923	-		DDA3937_RS13470	0.24	+1.9
3,071,923	-		DDA3937_RS13470	0.24	+4.2
3,071,923	-		DDA3937_RS13470	0.24	+2.6
3,071,923	-		DDA3937_RS13470	0.24	+4.6
3,071,923	-		DDA3937_RS13470	0.24	+4.1
3,071,923	-		DDA3937_RS13470	0.24	-0.3
3,071,923	-		DDA3937_RS13470	0.24	+3.6
3,071,923	-		DDA3937_RS13470	0.24	+3.5
3,071,923	-				+2.5
3,071,923	-		DDA3937_RS13470	0.24	+0.8
3,071,924	+		DDA3937_RS13470	0.24	+2.8
3,071,924	+		DDA3937_RS13470	0.24	+3.2
3,071,924	+		DDA3937_RS13470	0.24	+0.7
3,071,925	-		DDA3937_RS13470	0.24	+6.1
3,071,925	-		DDA3937_RS13470	0.24	+0.1
3,071,975	+		DDA3937_RS13470	0.31	+1.4
3,071,976	-		DDA3937_RS13470	0.32	+4.6
3,071,976	-		DDA3937_RS13470	0.32	+4.1
3,071,976	-		DDA3937_RS13470	0.32	+1.2
3,071,976	-		DDA3937_RS13470	0.32	+4.0
3,071,976	-		DDA3937_RS13470	0.32	+2.1
3,072,012	+		DDA3937_RS13470	0.37	+3.4
3,072,013	-				+3.8
3,072,022	+				-0.7
3,072,022	+		DDA3937_RS13470	0.38	+4.6
3,072,022	+		DDA3937_RS13470	0.38	+3.1
3,072,023	-		DDA3937_RS13470	0.39	+2.6
3,072,023	-		DDA3937_RS13470	0.39	+2.8
3,072,196	-		DDA3937_RS13470	0.64	+2.9
3,072,217	-		DDA3937_RS13470	0.67	+4.3
3,072,247	+		DDA3937_RS13470	0.72	+4.0
3,072,247	+		DDA3937_RS13470	0.72	+4.8
3,072,248	-		DDA3937_RS13470	0.72	+2.8
3,072,339	+		DDA3937_RS13470	0.86	+1.3
3,072,340	-		DDA3937_RS13470	0.86	+2.9
3,072,340	-		DDA3937_RS13470	0.86	+3.2
3,072,340	-		DDA3937_RS13470	0.86	+2.9
3,072,340	-		DDA3937_RS13470	0.86	+2.4
3,072,340	-		DDA3937_RS13470	0.86	+6.5
3,072,347	-		DDA3937_RS13470	0.87	+2.3
3,072,361	-		DDA3937_RS13470	0.89	+1.6
3,072,361	-		DDA3937_RS13470	0.89	+3.9
3,072,361	-		DDA3937_RS13470	0.89	+6.8
3,072,361	-		DDA3937_RS13470	0.89	+5.3
3,072,372	+				+1.6
3,072,399	+				+2.7
3,072,400	-				+4.2
3,072,400	-				+1.9
3,072,429	+				+3.1
3,072,463	+				+2.2
3,072,493	-		DDA3937_RS13475	0.11	+3.9
3,072,500	-		DDA3937_RS13475	0.13	+3.8
3,072,518	+		DDA3937_RS13475	0.17	+3.4
3,072,518	+		DDA3937_RS13475	0.17	+2.2
3,072,519	-		DDA3937_RS13475	0.18	+3.6
3,072,519	-		DDA3937_RS13475	0.18	+2.3
3,072,519	-		DDA3937_RS13475	0.18	+4.4
3,072,584	+		DDA3937_RS13475	0.34	+0.8
3,072,584	+		DDA3937_RS13475	0.34	-1.3
3,072,584	+		DDA3937_RS13475	0.34	+3.5
3,072,584	+		DDA3937_RS13475	0.34	+1.4
3,072,584	+		DDA3937_RS13475	0.34	+1.7
3,072,585	-		DDA3937_RS13475	0.34	+4.5
3,072,620	+		DDA3937_RS13475	0.42	+1.5
3,072,666	+		DDA3937_RS13475	0.54	+1.5
3,072,667	-		DDA3937_RS13475	0.54	-0.3
3,072,667	-		DDA3937_RS13475	0.54	+2.5
3,072,838	-				+1.6
3,072,838	-				+3.1
3,072,840	+				+3.0
3,072,844	+				+3.0
3,072,844	+				+2.9
3,072,845	-				+1.2
3,072,866	+				+1.6
3,072,866	+				+1.9
3,072,866	+				+2.2
3,072,866	+				+2.3
3,072,866	+				+1.5
3,072,866	+				+3.0
3,072,866	+				+1.3
3,072,866	+				+2.4
3,072,867	-				+2.6
3,072,867	-				+2.6
3,072,867	-				+2.4
3,072,867	-				+2.7
3,072,868	+				+4.6
3,072,868	+				+3.0
3,072,868	+				+5.1
3,072,868	+				+2.8
3,072,868	+				+2.6
3,072,868	+				+2.4
3,072,868	+				+3.0
3,072,868	+				+4.1
3,072,868	+				+0.7
3,072,868	+				-1.6
3,072,868	+				+2.6
3,072,868	+				+4.2
3,072,868	+				+2.3
3,072,868	+				+0.3
3,072,869	-				+2.5
3,072,869	-				+1.0
3,072,869	-				+2.4
3,072,869	-				-0.0
3,072,869	-				-2.7
3,072,887	+				+2.4
3,072,887	+				+5.5
3,072,888	-				-2.4
3,072,908	-				+2.3
3,072,959	+		DDA3937_RS13480	0.17	+3.3
3,072,959	+		DDA3937_RS13480	0.17	+2.1
3,072,959	+		DDA3937_RS13480	0.17	+5.1
3,072,960	-		DDA3937_RS13480	0.18	+3.2
3,072,960	-		DDA3937_RS13480	0.18	+4.2
3,072,960	-		DDA3937_RS13480	0.18	+2.8
3,072,987	+		DDA3937_RS13480	0.24	+1.8
3,073,003	-		DDA3937_RS13480	0.28	+3.6
3,073,072	+		DDA3937_RS13480	0.44	+3.3
3,073,089	+		DDA3937_RS13480	0.48	+4.1
3,073,089	+		DDA3937_RS13480	0.48	+3.6
3,073,090	-		DDA3937_RS13480	0.49	+2.5
3,073,090	-		DDA3937_RS13480	0.49	+1.5
3,073,193	+		DDA3937_RS13480	0.73	+4.4
3,073,297	-				+2.7
3,073,328	+				+2.3
3,073,337	+				+3.0
3,073,337	+				+3.6
3,073,337	+				+0.7
3,073,342	+				+2.5
3,073,374	+				+2.5
3,073,374	+				+5.8
3,073,380	+				+2.4
3,073,380	+				+2.3
3,073,381	-				-0.9
3,073,393	+				+0.8
3,073,397	+				-1.7
3,073,398	-				-0.3
3,073,398	-				-0.7
3,073,398	-				-2.3
3,073,398	-				-0.3
3,073,398	-				+1.2
3,073,411	+				-1.7
3,073,411	+				+1.5
3,073,411	+				-1.3
3,073,412	-				-0.1
3,073,412	-				-1.3
3,073,419	+				+0.1
3,073,420	-				-1.3
3,073,430	+				-1.3
3,073,431	-				+3.6
3,073,431	-				+1.5
3,073,431	-				+2.3
3,073,433	+				+0.2
3,073,433	+				-2.6
3,073,433	+				-1.1
3,073,465	-				+4.3
3,073,465	-				+5.9
3,073,465	-				+2.9
3,073,465	-				+3.0
3,073,465	-				+2.0
3,073,465	-				+4.1
3,073,490	+				+1.8
3,073,494	+				+2.7
3,073,494	+				+3.1
3,073,494	+				+1.6
3,073,494	+				+2.8
3,073,495	-				+1.6
3,073,495	-				+2.8
3,073,495	-				+8.6
3,073,495	-				+3.5
3,073,495	-				+2.6
3,073,495	-				+4.0
3,073,588	+		DDA3937_RS13485	0.17	+3.4
3,073,609	+		DDA3937_RS13485	0.20	+2.8
3,073,609	+		DDA3937_RS13485	0.20	+1.4
3,073,609	+		DDA3937_RS13485	0.20	+1.7
3,073,609	+		DDA3937_RS13485	0.20	+3.4
3,073,610	-		DDA3937_RS13485	0.21	-1.6
3,073,610	-		DDA3937_RS13485	0.21	+3.6
3,073,752	+		DDA3937_RS13485	0.42	+2.7
3,073,752	+		DDA3937_RS13485	0.42	+0.5
3,073,753	-		DDA3937_RS13485	0.42	+1.9
3,073,769	+		DDA3937_RS13485	0.44	+3.0
3,073,769	+		DDA3937_RS13485	0.44	+2.9
3,073,769	+		DDA3937_RS13485	0.44	+3.6
3,073,769	+		DDA3937_RS13485	0.44	+2.1
3,073,769	+		DDA3937_RS13485	0.44	+1.7
3,073,769	+		DDA3937_RS13485	0.44	+2.2
3,073,769	+		DDA3937_RS13485	0.44	+3.0
3,073,769	+		DDA3937_RS13485	0.44	+4.5
3,073,769	+		DDA3937_RS13485	0.44	-0.7
3,073,769	+		DDA3937_RS13485	0.44	+1.8
3,073,770	-		DDA3937_RS13485	0.45	+3.1
3,073,770	-		DDA3937_RS13485	0.45	+4.2
3,073,770	-		DDA3937_RS13485	0.45	+2.4
3,073,770	-		DDA3937_RS13485	0.45	+4.6
3,073,770	-		DDA3937_RS13485	0.45	+4.6
3,073,770	-		DDA3937_RS13485	0.45	+3.9
3,074,021	-		DDA3937_RS13485	0.82	+3.9
3,074,095	-				+0.7
3,074,123	-				+0.9
3,074,138	+				-1.6
3,074,139	-				-1.5
3,074,147	-				-2.1
3,074,151	+				-0.8
3,074,151	+				-1.2
3,074,151	+				-1.1
3,074,151	+				-1.9
3,074,171	-				-1.3
3,074,177	+				-1.0
3,074,177	+				-2.5
3,074,177	+				-2.7
3,074,177	+				-2.5
3,074,177	+				+1.0
3,074,177	+				-0.1
3,074,177	+				-0.6
3,074,177	+				-0.8
3,074,177	+				-1.2
3,074,178	-				-1.1
3,074,178	-				-0.9
3,074,181	+				-1.3
3,074,181	+				-0.3
3,074,181	+				+0.1
3,074,181	+				-0.4
3,074,181	+				-2.0
3,074,182	-				-0.3
3,074,182	-				-1.1
3,074,194	+				+0.2
3,074,194	+				-0.9
3,074,207	+				-1.1
3,074,207	+				-0.1
3,074,281	+				-0.3