Strain Fitness in Dickeya dadantii 3937 around DDA3937_RS11985

Experiment: M9+glycerol

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	M9+glycerol
2,724,664	+		DDA3937_RS11980	0.32	-0.4
2,724,664	+		DDA3937_RS11980	0.32	-2.0
2,724,664	+		DDA3937_RS11980	0.32	-0.4
2,724,664	+		DDA3937_RS11980	0.32	+0.4
2,724,664	+		DDA3937_RS11980	0.32	-1.7
2,724,664	+		DDA3937_RS11980	0.32	+0.3
2,724,664	+		DDA3937_RS11980	0.32	+0.2
2,724,664	+		DDA3937_RS11980	0.32	-0.6
2,724,664	+		DDA3937_RS11980	0.32	+0.3
2,724,665	-		DDA3937_RS11980	0.32	-1.0
2,724,665	-		DDA3937_RS11980	0.32	-0.1
2,724,665	-		DDA3937_RS11980	0.32	-0.7
2,724,665	-		DDA3937_RS11980	0.32	-1.8
2,724,665	-		DDA3937_RS11980	0.32	-1.8
2,724,665	-		DDA3937_RS11980	0.32	+0.2
2,724,665	-		DDA3937_RS11980	0.32	-0.0
2,724,665	-		DDA3937_RS11980	0.32	-1.4
2,724,665	-		DDA3937_RS11980	0.32	-0.9
2,724,666	+		DDA3937_RS11980	0.32	+0.2
2,724,667	-		DDA3937_RS11980	0.32	-0.4
2,724,667	-		DDA3937_RS11980	0.32	-1.1
2,724,667	-		DDA3937_RS11980	0.32	-0.4
2,724,667	-		DDA3937_RS11980	0.32	-2.5
2,724,667	-		DDA3937_RS11980	0.32	-1.5
2,724,667	-		DDA3937_RS11980	0.32	-1.7
2,724,756	+		DDA3937_RS11980	0.39	-0.8
2,724,756	+		DDA3937_RS11980	0.39	+0.0
2,724,756	+		DDA3937_RS11980	0.39	-1.8
2,724,756	+		DDA3937_RS11980	0.39	+0.8
2,724,756	+		DDA3937_RS11980	0.39	+1.8
2,724,756	+		DDA3937_RS11980	0.39	-0.1
2,724,757	-		DDA3937_RS11980	0.39	-2.3
2,724,757	-		DDA3937_RS11980	0.39	-1.5
2,724,757	-		DDA3937_RS11980	0.39	-2.9
2,724,757	-				+1.2
2,724,757	-		DDA3937_RS11980	0.39	-1.6
2,724,791	-		DDA3937_RS11980	0.42	-0.4
2,724,808	+				+1.2
2,724,838	+		DDA3937_RS11980	0.46	+1.2
2,724,878	+		DDA3937_RS11980	0.49	-1.0
2,724,879	-		DDA3937_RS11980	0.49	-0.6
2,725,035	-		DDA3937_RS11980	0.62	+0.2
2,725,072	+		DDA3937_RS11980	0.65	+0.9
2,725,116	+		DDA3937_RS11980	0.68	-2.0
2,725,116	+		DDA3937_RS11980	0.68	+1.3
2,725,116	+		DDA3937_RS11980	0.68	-0.6
2,725,160	+		DDA3937_RS11980	0.72	+0.2
2,725,160	+		DDA3937_RS11980	0.72	-0.6
2,725,160	+		DDA3937_RS11980	0.72	-0.5
2,725,160	+		DDA3937_RS11980	0.72	-1.8
2,725,160	+		DDA3937_RS11980	0.72	-0.3
2,725,160	+		DDA3937_RS11980	0.72	-0.6
2,725,160	+		DDA3937_RS11980	0.72	+0.2
2,725,160	+		DDA3937_RS11980	0.72	+4.7
2,725,160	+		DDA3937_RS11980	0.72	-0.4
2,725,161	-		DDA3937_RS11980	0.72	+3.5
2,725,161	-		DDA3937_RS11980	0.72	-0.4
2,725,161	-		DDA3937_RS11980	0.72	+0.6
2,725,161	-		DDA3937_RS11980	0.72	-0.6
2,725,161	-		DDA3937_RS11980	0.72	-1.0
2,725,161	-		DDA3937_RS11980	0.72	-0.7
2,725,161	-		DDA3937_RS11980	0.72	-1.4
2,725,161	-		DDA3937_RS11980	0.72	-0.7
2,725,409	+				+0.2
2,725,409	+				+0.0
2,725,410	-				-1.4
2,725,410	-				-1.7
2,725,410	-				-0.6
2,725,459	+				-0.4
2,725,459	+				-1.7
2,725,459	+				-0.9
2,725,459	+				-2.3
2,725,460	-				-1.1
2,725,506	+				-2.1
2,725,506	+				-1.8
2,725,506	+				-0.6
2,725,506	+				+2.6
2,725,506	+				-1.0
2,725,506	+				+0.2
2,725,506	+				-1.6
2,725,506	+				+0.3
2,725,506	+				+0.4
2,725,507	-				+0.2
2,725,507	-				-2.0
2,725,507	-				-0.4
2,725,507	-				-1.5
2,725,507	-				+1.2
2,725,509	+				+0.7
2,725,509	+				+0.4
2,725,509	+				-1.3
2,725,510	-				-1.2
2,725,510	-				-1.1
2,725,510	-				-1.8
2,725,515	+				-1.5
2,725,515	+				-0.6
2,725,516	-				-2.0
2,725,516	-				-0.6
2,725,520	+				+1.2
2,725,639	+				-0.9
2,725,761	+				+0.0
2,725,762	-				-0.1
2,725,762	-				-2.0
2,725,762	-				+0.9
2,725,762	-				-0.2
2,725,804	-		DDA3937_RS11985	0.11	+0.3
2,725,857	+		DDA3937_RS11985	0.13	-0.7
2,725,915	+		DDA3937_RS11985	0.15	-2.1
2,725,915	+		DDA3937_RS11985	0.15	-0.2
2,725,916	-		DDA3937_RS11985	0.15	+0.2
2,725,916	-		DDA3937_RS11985	0.15	+0.1
2,725,916	-		DDA3937_RS11985	0.15	-0.7
2,725,916	-		DDA3937_RS11985	0.15	-1.0
2,725,971	+		DDA3937_RS11985	0.17	-0.7
2,725,985	-		DDA3937_RS11985	0.17	-1.1
2,725,985	-		DDA3937_RS11985	0.17	+3.3
2,725,985	-		DDA3937_RS11985	0.17	-0.9
2,726,012	+		DDA3937_RS11985	0.19	-2.1
2,726,012	+		DDA3937_RS11985	0.19	+0.4
2,726,012	+		DDA3937_RS11985	0.19	-0.3
2,726,012	+		DDA3937_RS11985	0.19	-1.5
2,726,012	+		DDA3937_RS11985	0.19	-0.8
2,726,012	+		DDA3937_RS11985	0.19	-1.1
2,726,013	-		DDA3937_RS11985	0.19	-2.1
2,726,013	-		DDA3937_RS11985	0.19	-1.8
2,726,013	-		DDA3937_RS11985	0.19	-0.1
2,726,062	+		DDA3937_RS11985	0.20	+1.6
2,726,062	+		DDA3937_RS11985	0.20	-0.7
2,726,063	-		DDA3937_RS11985	0.20	-2.1
2,726,092	+		DDA3937_RS11985	0.22	+0.6
2,726,098	+		DDA3937_RS11985	0.22	-3.1
2,726,099	-		DDA3937_RS11985	0.22	-0.4
2,726,099	-		DDA3937_RS11985	0.22	+2.4
2,726,205	-		DDA3937_RS11985	0.26	+0.6
2,726,326	+		DDA3937_RS11985	0.30	-0.5
2,726,326	+		DDA3937_RS11985	0.30	-2.4
2,726,327	-		DDA3937_RS11985	0.30	-1.4
2,726,327	-		DDA3937_RS11985	0.30	+1.1
2,726,498	+		DDA3937_RS11985	0.37	-0.4
2,726,498	+		DDA3937_RS11985	0.37	-0.9
2,726,498	+		DDA3937_RS11985	0.37	+0.5
2,726,863	-		DDA3937_RS11985	0.51	-0.1
2,727,016	+		DDA3937_RS11985	0.57	-1.7
2,727,127	+		DDA3937_RS11985	0.61	+1.5
2,727,128	-		DDA3937_RS11985	0.61	+0.1
2,727,196	+		DDA3937_RS11985	0.64	-0.1
2,727,196	+		DDA3937_RS11985	0.64	+0.6
2,727,196	+		DDA3937_RS11985	0.64	-2.0
2,727,196	+				+0.6
2,727,196	+		DDA3937_RS11985	0.64	-0.6
2,727,196	+		DDA3937_RS11985	0.64	-1.0
2,727,197	-		DDA3937_RS11985	0.64	-1.4
2,727,197	-		DDA3937_RS11985	0.64	-2.3
2,727,197	-		DDA3937_RS11985	0.64	-0.2
2,727,197	-		DDA3937_RS11985	0.64	+0.1
2,727,197	-		DDA3937_RS11985	0.64	-2.6
2,727,197	-		DDA3937_RS11985	0.64	+0.3
2,727,197	-		DDA3937_RS11985	0.64	-2.5
2,727,197	-		DDA3937_RS11985	0.64	-1.6
2,727,197	-		DDA3937_RS11985	0.64	-0.4
2,727,197	-		DDA3937_RS11985	0.64	-2.1
2,727,197	-				-1.6
2,727,197	-		DDA3937_RS11985	0.64	-0.8
2,727,211	+		DDA3937_RS11985	0.64	+0.2
2,727,231	+		DDA3937_RS11985	0.65	-0.8
2,727,235	-		DDA3937_RS11985	0.65	-0.6
2,727,387	-		DDA3937_RS11985	0.71	-2.5
2,727,388	+		DDA3937_RS11985	0.71	-1.9
2,727,388	+		DDA3937_RS11985	0.71	+0.8
2,727,388	+		DDA3937_RS11985	0.71	-0.6
2,727,389	-		DDA3937_RS11985	0.71	-0.5
2,727,389	-		DDA3937_RS11985	0.71	-2.6
2,727,389	-		DDA3937_RS11985	0.71	-0.6
2,727,442	+		DDA3937_RS11985	0.73	-0.4
2,727,442	+		DDA3937_RS11985	0.73	-1.4
2,727,442	+		DDA3937_RS11985	0.73	+0.8
2,727,442	+				-0.8
2,727,442	+		DDA3937_RS11985	0.73	-1.5
2,727,442	+		DDA3937_RS11985	0.73	-2.5
2,727,442	+		DDA3937_RS11985	0.73	-2.5
2,727,442	+		DDA3937_RS11985	0.73	-2.4
2,727,443	-		DDA3937_RS11985	0.73	-1.3
2,727,443	-		DDA3937_RS11985	0.73	-1.8
2,727,443	-		DDA3937_RS11985	0.73	+0.7
2,727,443	-		DDA3937_RS11985	0.73	-1.7
2,727,481	+		DDA3937_RS11985	0.74	-1.8
2,727,482	-		DDA3937_RS11985	0.74	-0.6
2,727,571	+		DDA3937_RS11985	0.78	-1.4
2,727,571	+		DDA3937_RS11985	0.78	-1.3
2,727,572	-		DDA3937_RS11985	0.78	+0.7
2,727,572	-		DDA3937_RS11985	0.78	-1.0
2,727,670	+		DDA3937_RS11985	0.82	-0.7
2,727,670	+		DDA3937_RS11985	0.82	-0.8
2,727,671	-		DDA3937_RS11985	0.82	-0.4
2,727,671	-		DDA3937_RS11985	0.82	+0.8
2,727,671	-		DDA3937_RS11985	0.82	-1.0
2,727,671	-		DDA3937_RS11985	0.82	+0.4
2,727,671	-		DDA3937_RS11985	0.82	-1.4
2,727,797	+		DDA3937_RS11985	0.86	+0.3
2,727,958	+				-3.3
2,727,959	-				+0.4
2,727,960	+				-0.4
2,728,166	+				-0.1
2,728,218	+				+0.5
2,728,218	+				-1.3
2,728,218	+				-1.4
2,728,218	+				-1.2
2,728,218	+				+0.2
2,728,219	-				-0.6
2,728,223	+				+0.4
2,728,243	+				-1.8
2,728,243	+				-1.2
2,728,244	-				-1.6
2,728,244	-				+2.9
2,728,244	-				+0.2
2,728,244	-				-0.0
2,728,244	-				+0.2
2,728,277	-				+0.5
2,728,277	-				-1.8
2,728,321	+				-2.8
2,728,321	+				-1.5
2,728,321	+				-1.1
2,728,321	+				+0.3
2,728,321	+				-0.7
2,728,321	+				-1.0
2,728,322	-				-2.0
2,728,322	-				+1.2
2,728,322	-				-1.6
2,728,394	-				-1.1
2,728,394	-				-2.4
2,728,396	+				+0.1
2,728,397	-				+2.3
2,728,559	+		DDA3937_RS11990	0.20	-1.4
2,728,559	+		DDA3937_RS11990	0.20	-1.4
2,728,559	+		DDA3937_RS11990	0.20	-1.4
2,728,559	+		DDA3937_RS11990	0.20	-0.0
2,728,559	+		DDA3937_RS11990	0.20	-1.1
2,728,560	-		DDA3937_RS11990	0.20	+1.8
2,728,698	+		DDA3937_RS11990	0.30	-1.4
2,728,715	+		DDA3937_RS11990	0.31	-0.6
2,728,716	-		DDA3937_RS11990	0.31	-0.1
2,728,737	+		DDA3937_RS11990	0.33	+1.4
2,728,997	+		DDA3937_RS11990	0.51	-1.5