Strain Fitness in Dickeya dadantii 3937 around DDA3937_RS09535

Experiment: M9+glycerol

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	M9+glycerol
2,145,632	+		DDA3937_RS09530	0.61	+1.6
2,145,632	+		DDA3937_RS09530	0.61	-0.9
2,145,632	+		DDA3937_RS09530	0.61	-0.6
2,145,632	+		DDA3937_RS09530	0.61	+0.7
2,145,632	+		DDA3937_RS09530	0.61	-0.1
2,145,717	+		DDA3937_RS09530	0.67	-1.6
2,145,806	-		DDA3937_RS09530	0.73	-2.3
2,145,806	-		DDA3937_RS09530	0.73	-1.1
2,145,806	-		DDA3937_RS09530	0.73	+0.5
2,145,875	+		DDA3937_RS09530	0.77	-1.4
2,145,875	+		DDA3937_RS09530	0.77	-1.1
2,145,908	-		DDA3937_RS09530	0.80	-0.8
2,145,983	+		DDA3937_RS09530	0.85	-1.8
2,145,983	+		DDA3937_RS09530	0.85	-2.9
2,145,984	-		DDA3937_RS09530	0.85	+0.4
2,145,986	+		DDA3937_RS09530	0.85	+0.2
2,145,987	-		DDA3937_RS09530	0.85	-1.1
2,145,987	-		DDA3937_RS09530	0.85	-3.3
2,145,987	-		DDA3937_RS09530	0.85	-1.4
2,146,006	+		DDA3937_RS09530	0.86	-1.1
2,146,023	+		DDA3937_RS09530	0.87	+1.0
2,146,023	+		DDA3937_RS09530	0.87	+0.1
2,146,023	+		DDA3937_RS09530	0.87	-0.7
2,146,023	+		DDA3937_RS09530	0.87	+1.6
2,146,023	+		DDA3937_RS09530	0.87	-2.7
2,146,023	+		DDA3937_RS09530	0.87	-2.1
2,146,023	+		DDA3937_RS09530	0.87	-1.0
2,146,024	-		DDA3937_RS09530	0.88	-1.4
2,146,024	-		DDA3937_RS09530	0.88	-1.4
2,146,024	-		DDA3937_RS09530	0.88	-1.5
2,146,024	-		DDA3937_RS09530	0.88	-1.0
2,146,024	-		DDA3937_RS09530	0.88	-1.6
2,146,024	-		DDA3937_RS09530	0.88	-1.4
2,146,024	-		DDA3937_RS09530	0.88	-1.5
2,146,025	+		DDA3937_RS09530	0.88	-0.1
2,146,026	-		DDA3937_RS09530	0.88	+1.2
2,146,026	-		DDA3937_RS09530	0.88	-2.1
2,146,046	+		DDA3937_RS09530	0.89	-0.6
2,146,046	+		DDA3937_RS09530	0.89	-0.4
2,146,047	-		DDA3937_RS09530	0.89	+1.0
2,146,047	-		DDA3937_RS09530	0.89	-0.3
2,146,057	+		DDA3937_RS09530	0.90	-2.0
2,146,058	-		DDA3937_RS09530	0.90	-1.4
2,146,058	-		DDA3937_RS09530	0.90	+0.9
2,146,160	+				-2.3
2,146,160	+				+0.2
2,146,225	+				+0.5
2,146,225	+				-2.0
2,146,226	-				-1.4
2,146,291	+				-1.4
2,146,291	+				-3.3
2,146,291	+				+0.9
2,146,291	+				+0.7
2,146,292	-				-2.4
2,146,307	+				-0.3
2,146,307	+				-0.5
2,146,307	+				-0.0
2,146,307	+				-0.3
2,146,307	+				-0.5
2,146,308	-				-1.1
2,146,308	-				-2.0
2,146,345	+				-1.6
2,146,345	+				-0.5
2,146,345	+				-0.2
2,146,345	+				-0.9
2,146,345	+				+0.4
2,146,345	+				-1.3
2,146,345	+				+0.7
2,146,345	+				-1.1
2,146,346	-				+2.2
2,146,346	-				-0.2
2,146,346	-				+2.6
2,146,346	-				+1.1
2,146,346	-				-1.4
2,146,346	-				+0.7
2,146,346	-				-1.4
2,146,459	+				-0.8
2,146,460	-				-1.9
2,146,465	+				+2.0
2,146,465	+				-0.5
2,146,466	-				-1.4
2,146,466	-				-1.4
2,146,466	-				+0.4
2,146,469	+				+0.9
2,146,470	-				-1.3
2,146,470	-				+3.8
2,146,470	-				-0.7
2,146,470	-				-1.6
2,146,472	+				-3.5
2,146,472	+				-2.9
2,146,479	+				-0.6
2,146,494	-				+0.8
2,146,494	-				-0.6
2,146,496	+				+0.2
2,146,496	+				-2.1
2,146,496	+				-2.1
2,146,496	+				-2.6
2,146,497	-				-0.8
2,146,497	-				-2.4
2,146,497	-				-0.4
2,146,497	-				+0.2
2,146,497	-				-1.2
2,146,498	+				-1.4
2,146,498	+				-0.0
2,146,498	+				+0.1
2,146,498	+				-0.9
2,146,498	+				+1.1
2,146,499	-				-0.8
2,146,499	-				-0.2
2,146,499	-				-0.2
2,146,499	-				-0.8
2,146,499	-				-3.2
2,146,499	-				+0.4
2,146,499	-				+0.1
2,146,512	+				-0.6
2,146,512	+				-0.6
2,146,512	+				-1.3
2,146,513	-				+0.1
2,146,513	-				+0.7
2,146,513	-				-0.9
2,146,513	-				-1.1
2,146,515	+				-1.2
2,146,515	+				-1.0
2,146,515	+				+1.2
2,146,515	+				+0.9
2,146,515	+				-0.7
2,146,515	+				+0.9
2,146,516	-				+0.7
2,146,517	+				-1.6
2,146,517	+				-0.0
2,146,517	+				-0.2
2,146,517	+				-0.6
2,146,517	+				-1.1
2,146,517	+				-1.7
2,146,517	+				+0.4
2,146,517	+				-0.6
2,146,517	+				+0.8
2,146,517	+				-0.5
2,146,518	-				+0.7
2,146,518	-				+1.9
2,146,518	-				-1.1
2,146,518	-				-0.7
2,146,518	-				-0.5
2,146,518	-				-0.8
2,146,518	-				-1.4
2,146,595	+				-0.8
2,146,595	+				-0.6
2,146,595	+				+0.3
2,146,595	+				-0.0
2,146,596	-				+0.8
2,146,596	-				-0.9
2,146,650	-				-1.4
2,146,675	-				-2.1
2,146,675	-				+0.4
2,146,725	+				-0.9
2,146,853	+		DDA3937_RS09535	0.23	-3.6
2,146,853	+		DDA3937_RS09535	0.23	-1.6
2,146,858	+		DDA3937_RS09535	0.23	-1.6
2,146,858	+				+1.6
2,146,859	-		DDA3937_RS09535	0.23	+3.1
2,146,859	-		DDA3937_RS09535	0.23	+2.1
2,146,859	-		DDA3937_RS09535	0.23	-0.0
2,146,936	+				+0.9
2,146,987	+		DDA3937_RS09535	0.36	-2.6
2,146,987	+		DDA3937_RS09535	0.36	-1.0
2,146,987	+		DDA3937_RS09535	0.36	-0.1
2,146,988	-		DDA3937_RS09535	0.36	-0.0
2,146,988	-		DDA3937_RS09535	0.36	+0.4
2,146,988	-		DDA3937_RS09535	0.36	-0.4
2,146,988	-		DDA3937_RS09535	0.36	-2.3
2,146,988	-		DDA3937_RS09535	0.36	-0.4
2,146,988	-		DDA3937_RS09535	0.36	+0.4
2,146,988	-		DDA3937_RS09535	0.36	-2.4
2,146,989	+		DDA3937_RS09535	0.36	-1.0
2,146,989	+		DDA3937_RS09535	0.36	+0.7
2,146,989	+		DDA3937_RS09535	0.36	-1.0
2,146,989	+		DDA3937_RS09535	0.36	-0.0
2,146,989	+		DDA3937_RS09535	0.36	-0.4
2,146,989	+		DDA3937_RS09535	0.36	-2.8
2,146,990	-		DDA3937_RS09535	0.36	-1.4
2,146,990	-		DDA3937_RS09535	0.36	-2.1
2,146,990	-		DDA3937_RS09535	0.36	-1.2
2,146,990	-		DDA3937_RS09535	0.36	-0.7
2,146,990	-		DDA3937_RS09535	0.36	-1.5
2,146,990	-		DDA3937_RS09535	0.36	-0.0
2,146,990	-		DDA3937_RS09535	0.36	+2.4
2,146,990	-		DDA3937_RS09535	0.36	-1.3
2,147,120	+		DDA3937_RS09535	0.49	-0.4
2,147,120	+		DDA3937_RS09535	0.49	-2.0
2,147,121	-		DDA3937_RS09535	0.49	+0.2
2,147,121	-		DDA3937_RS09535	0.49	+0.4
2,147,121	-		DDA3937_RS09535	0.49	-1.5
2,147,293	-		DDA3937_RS09535	0.66	-1.6
2,147,293	-		DDA3937_RS09535	0.66	-2.7
2,147,353	-		DDA3937_RS09535	0.72	+0.8
2,147,414	+		DDA3937_RS09535	0.78	+0.1
2,147,415	-		DDA3937_RS09535	0.78	-0.2
2,147,461	+		DDA3937_RS09535	0.83	-1.7
2,147,461	+		DDA3937_RS09535	0.83	-1.4
2,147,461	+		DDA3937_RS09535	0.83	-2.1
2,147,461	+		DDA3937_RS09535	0.83	-2.6
2,147,461	+		DDA3937_RS09535	0.83	-1.2
2,147,462	-		DDA3937_RS09535	0.83	+0.2
2,147,462	-		DDA3937_RS09535	0.83	+0.0
2,147,462	-		DDA3937_RS09535	0.83	-0.1
2,147,462	-		DDA3937_RS09535	0.83	-1.6
2,147,463	+		DDA3937_RS09535	0.83	+1.2
2,147,464	-		DDA3937_RS09535	0.83	-0.1
2,147,464	-		DDA3937_RS09535	0.83	-0.0
2,147,464	-		DDA3937_RS09535	0.83	-0.2
2,147,529	+				+0.6
2,147,529	+		DDA3937_RS09535	0.90	+0.4
2,147,561	+				+1.8
2,147,561	+				-0.9
2,147,561	+				-1.4
2,147,561	+				-0.6
2,147,561	+				-0.4
2,147,561	+				-0.4
2,147,561	+				-2.1
2,147,562	-				-0.0
2,147,562	-				-1.1
2,147,562	-				+1.6
2,147,562	-				+1.3
2,147,620	+				+0.6
2,147,645	-				-2.0
2,147,645	-				-0.1
2,147,660	+				+1.2
2,147,712	+				-0.3
2,147,712	+				+0.9
2,147,712	+				+1.2
2,147,713	-				+1.0
2,147,713	-				+1.7
2,147,811	+				-1.6
2,147,812	-				+0.3
2,147,812	-				-0.5
2,147,813	+				-0.7
2,147,814	-				+2.0
2,147,814	-				+0.4
2,147,814	-				-0.4
2,148,027	+		DDA3937_RS09540	0.20	-2.7
2,148,028	-		DDA3937_RS09540	0.20	-0.7
2,148,028	-		DDA3937_RS09540	0.20	-2.8
2,148,039	-		DDA3937_RS09540	0.21	-1.4
2,148,039	-		DDA3937_RS09540	0.21	+0.4
2,148,042	+		DDA3937_RS09540	0.21	+0.0
2,148,043	-		DDA3937_RS09540	0.21	-0.6
2,148,079	+		DDA3937_RS09540	0.23	+0.7
2,148,091	-		DDA3937_RS09540	0.24	-1.5
2,148,102	-		DDA3937_RS09540	0.25	-0.1
2,148,104	+		DDA3937_RS09540	0.25	-0.7
2,148,104	+		DDA3937_RS09540	0.25	+0.8
2,148,105	-		DDA3937_RS09540	0.25	-1.3
2,148,105	-		DDA3937_RS09540	0.25	-1.8
2,148,232	-		DDA3937_RS09540	0.33	-0.7
2,148,254	+		DDA3937_RS09540	0.34	+0.4
2,148,254	+		DDA3937_RS09540	0.34	-1.7
2,148,255	-		DDA3937_RS09540	0.34	-1.0
2,148,358	-		DDA3937_RS09540	0.40	-0.3
2,148,359	-		DDA3937_RS09540	0.40	-1.4
2,148,368	+		DDA3937_RS09540	0.41	-2.3
2,148,369	-		DDA3937_RS09540	0.41	+0.6
2,148,467	+				+1.2
2,148,467	+		DDA3937_RS09540	0.47	-1.5
2,148,468	-		DDA3937_RS09540	0.47	-0.1
2,148,539	+		DDA3937_RS09540	0.51	+2.5
2,148,539	+		DDA3937_RS09540	0.51	+0.2
2,148,539	+		DDA3937_RS09540	0.51	-0.3
2,148,539	+		DDA3937_RS09540	0.51	+0.8
2,148,539	+		DDA3937_RS09540	0.51	-0.0
2,148,539	+		DDA3937_RS09540	0.51	+0.6
2,148,540	-		DDA3937_RS09540	0.51	-0.4
2,148,540	-		DDA3937_RS09540	0.51	+1.0
2,148,540	-		DDA3937_RS09540	0.51	+0.6
2,148,540	-		DDA3937_RS09540	0.51	+0.1
2,148,543	+		DDA3937_RS09540	0.51	+0.2
2,148,543	+		DDA3937_RS09540	0.51	-1.1
2,148,543	+		DDA3937_RS09540	0.51	-1.3
2,148,543	+		DDA3937_RS09540	0.51	-0.6
2,148,543	+		DDA3937_RS09540	0.51	-0.9
2,148,543	+		DDA3937_RS09540	0.51	-1.0
2,148,544	-		DDA3937_RS09540	0.52	-1.9
2,148,579	+		DDA3937_RS09540	0.54	-0.8
2,148,579	+		DDA3937_RS09540	0.54	-0.1
2,148,580	-		DDA3937_RS09540	0.54	-0.8
2,148,580	-		DDA3937_RS09540	0.54	+1.0
2,148,580	-		DDA3937_RS09540	0.54	-0.5
2,148,580	-		DDA3937_RS09540	0.54	-0.7
2,148,580	-		DDA3937_RS09540	0.54	-1.8