Strain Fitness in Dickeya dadantii 3937 around DDA3937_RS17465

Experiment: M9+glycerol

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	M9+glycerol
3,971,846	+				-1.0
3,971,847	-				+0.6
3,971,850	+				-0.0
3,971,851	-				-1.1
3,971,991	+				+0.6
3,971,991	+				-1.0
3,971,991	+				-0.4
3,971,991	+				+0.9
3,971,992	-				+0.3
3,971,992	-				-2.1
3,971,992	-				-0.1
3,972,011	+				-0.8
3,972,011	+				-1.7
3,972,012	-				-0.8
3,972,012	-				-0.1
3,972,012	-				-1.8
3,972,012	-				-0.1
3,972,012	-				-0.8
3,972,012	-				-0.3
3,972,041	+				-1.7
3,972,042	-				-0.5
3,972,056	+				-0.4
3,972,057	-				+0.5
3,972,057	-				-1.5
3,972,181	-		DDA3937_RS17460	0.19	-0.3
3,972,236	+		DDA3937_RS17460	0.27	+0.3
3,972,237	-		DDA3937_RS17460	0.27	+0.3
3,972,270	+		DDA3937_RS17460	0.32	-1.5
3,972,270	+		DDA3937_RS17460	0.32	+0.8
3,972,270	+		DDA3937_RS17460	0.32	-2.3
3,972,271	-		DDA3937_RS17460	0.32	-1.0
3,972,271	-		DDA3937_RS17460	0.32	-1.9
3,972,274	+		DDA3937_RS17460	0.32	+0.3
3,972,274	+		DDA3937_RS17460	0.32	+1.0
3,972,274	+		DDA3937_RS17460	0.32	+0.1
3,972,274	+		DDA3937_RS17460	0.32	-0.8
3,972,274	+		DDA3937_RS17460	0.32	-1.5
3,972,274	+		DDA3937_RS17460	0.32	-0.8
3,972,274	+		DDA3937_RS17460	0.32	-2.5
3,972,274	+		DDA3937_RS17460	0.32	-0.5
3,972,274	+		DDA3937_RS17460	0.32	-0.1
3,972,274	+		DDA3937_RS17460	0.32	+0.9
3,972,274	+		DDA3937_RS17460	0.32	-0.7
3,972,275	-		DDA3937_RS17460	0.32	-0.3
3,972,275	-		DDA3937_RS17460	0.32	-1.1
3,972,275	-		DDA3937_RS17460	0.32	-0.1
3,972,275	-		DDA3937_RS17460	0.32	-2.0
3,972,275	-		DDA3937_RS17460	0.32	+0.1
3,972,275	-		DDA3937_RS17460	0.32	-0.1
3,972,275	-		DDA3937_RS17460	0.32	-2.3
3,972,275	-		DDA3937_RS17460	0.32	-1.8
3,972,276	+		DDA3937_RS17460	0.32	+1.2
3,972,276	+		DDA3937_RS17460	0.32	-1.3
3,972,327	+		DDA3937_RS17460	0.40	-0.9
3,972,415	-		DDA3937_RS17460	0.52	-0.5
3,972,415	-		DDA3937_RS17460	0.52	-0.0
3,972,418	+		DDA3937_RS17460	0.53	-0.8
3,972,418	+		DDA3937_RS17460	0.53	-0.0
3,972,419	-		DDA3937_RS17460	0.53	+0.7
3,972,419	-		DDA3937_RS17460	0.53	-0.7
3,972,459	-		DDA3937_RS17460	0.58	-1.1
3,972,463	+		DDA3937_RS17460	0.59	+1.7
3,972,463	+		DDA3937_RS17460	0.59	+0.5
3,972,463	+		DDA3937_RS17460	0.59	-1.5
3,972,463	+		DDA3937_RS17460	0.59	+1.4
3,972,464	-		DDA3937_RS17460	0.59	+0.7
3,972,464	-		DDA3937_RS17460	0.59	+0.2
3,972,475	+		DDA3937_RS17460	0.61	-0.4
3,972,475	+		DDA3937_RS17460	0.61	-1.0
3,972,475	+		DDA3937_RS17460	0.61	+1.2
3,972,475	+		DDA3937_RS17460	0.61	-0.3
3,972,475	+		DDA3937_RS17460	0.61	-0.9
3,972,476	-		DDA3937_RS17460	0.61	-0.6
3,972,503	+		DDA3937_RS17460	0.65	+0.3
3,972,541	+		DDA3937_RS17460	0.70	+1.5
3,972,541	+		DDA3937_RS17460	0.70	+0.8
3,972,541	+		DDA3937_RS17460	0.70	+1.0
3,972,542	-		DDA3937_RS17460	0.70	-0.8
3,972,553	+		DDA3937_RS17460	0.72	+0.2
3,972,554	-		DDA3937_RS17460	0.72	+1.5
3,972,582	+		DDA3937_RS17460	0.76	-1.3
3,972,667	-		DDA3937_RS17460	0.88	-1.3
3,972,669	+		DDA3937_RS17460	0.88	+0.1
3,972,713	-				-1.9
3,972,713	-				-1.1
3,972,733	+				-1.5
3,972,733	+				-0.2
3,972,733	+				-0.8
3,972,733	+				-0.5
3,972,733	+				+0.0
3,972,733	+				+0.7
3,972,733	+				-2.4
3,972,733	+				-0.8
3,972,733	+				+1.2
3,972,734	-				+0.2
3,972,734	-				-0.3
3,972,734	-				-0.8
3,972,735	+				-0.3
3,972,735	+				-1.6
3,972,735	+				+0.5
3,972,735	+				-0.8
3,972,736	-				-0.9
3,972,736	-				-1.3
3,972,736	-				+0.1
3,972,769	-				+0.2
3,972,785	+				+0.5
3,972,785	+				+0.4
3,972,785	+				+0.0
3,972,785	+				-1.1
3,972,785	+				+1.1
3,972,785	+				+1.2
3,972,785	+				-0.8
3,972,785	+				+0.2
3,972,785	+				-0.4
3,972,786	-				+0.2
3,972,803	-				-0.1
3,972,803	-				+0.6
3,972,819	+				-1.9
3,972,819	+				+0.7
3,972,819	+				+0.2
3,972,819	+				-1.8
3,972,820	-				+0.4
3,972,820	-				+0.9
3,972,820	-				-0.1
3,972,820	-				-2.0
3,972,836	+				+1.5
3,972,836	+				-0.3
3,972,836	+				+0.2
3,972,836	+				-0.8
3,972,837	-				+0.5
3,972,837	-				-1.2
3,972,837	-				-0.7
3,972,837	-				+1.1
3,972,837	-				-0.2
3,972,837	-				-0.0
3,972,837	-				-2.3
3,972,837	-				+0.2
3,972,883	+		DDA3937_RS17465	0.10	-0.7
3,973,060	+		DDA3937_RS17465	0.49	+1.5
3,973,061	-		DDA3937_RS17465	0.49	-0.8
3,973,097	-		DDA3937_RS17465	0.57	-0.3
3,973,097	-		DDA3937_RS17465	0.57	+0.3
3,973,119	+		DDA3937_RS17465	0.61	-0.0
3,973,120	-		DDA3937_RS17465	0.62	+3.6
3,973,138	+		DDA3937_RS17465	0.66	-0.4
3,973,138	+		DDA3937_RS17465	0.66	+0.4
3,973,138	+		DDA3937_RS17465	0.66	+0.2
3,973,139	-		DDA3937_RS17465	0.66	-0.1
3,973,139	-		DDA3937_RS17465	0.66	-2.8
3,973,182	-		DDA3937_RS17465	0.75	+0.4
3,973,280	+				-0.7
3,973,281	-				-0.8
3,973,543	+		DDA3937_RS17470	0.55	-1.0
3,973,543	+		DDA3937_RS17470	0.55	-0.5
3,973,543	+		DDA3937_RS17470	0.55	+0.5
3,973,543	+		DDA3937_RS17470	0.55	-0.1
3,973,543	+		DDA3937_RS17470	0.55	-2.1
3,973,543	+		DDA3937_RS17470	0.55	-0.5
3,973,543	+		DDA3937_RS17470	0.55	-0.2
3,973,544	-		DDA3937_RS17470	0.55	-1.1
3,973,547	+		DDA3937_RS17470	0.56	+0.5
3,973,692	+		DDA3937_RS17470	0.88	-1.7
3,973,714	-				-0.5
3,973,811	+				+0.0
3,973,812	-				-0.6
3,973,812	-				+1.5
3,973,815	+				+2.0
3,973,845	-				-0.3
3,973,864	-				-1.7
3,973,884	+				+0.9
3,973,885	-				+2.9
3,973,935	+				-0.3
3,973,944	+				+0.2
3,973,944	+				+0.1
3,973,944	+				-1.3
3,973,945	-				-0.1
3,973,945	-				-1.8
3,973,945	-				+0.4
3,973,951	+				+0.9
3,973,952	-				+0.9
3,973,954	-				-0.1
3,973,972	+				-2.1
3,973,977	+				+0.4
3,973,990	-				+0.1
3,974,038	-				-0.2
3,974,058	-				-0.4
3,974,104	+				-1.0
3,974,122	-				-1.2
3,974,136	+				-0.2
3,974,136	+				-0.1
3,974,136	+				-0.3
3,974,206	+				-2.1
3,974,215	-				-1.8
3,974,215	-				-0.8
3,974,215	-				+1.5
3,974,215	-				+0.9
3,974,235	+				+1.0