Strain Fitness in Dickeya dadantii 3937 around DDA3937_RS13755

Experiment: M9+glycerol

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	M9+glycerol
3,131,408	-				-0.8
3,131,477	+				+3.0
3,131,499	+				-0.6
3,131,499	+				-1.5
3,131,500	-				-2.6
3,131,500	-				-1.5
3,131,500	-				-2.0
3,131,500	-				-0.4
3,131,501	+				+0.2
3,131,501	+				-1.3
3,131,502	-				-1.4
3,131,502	-				-1.7
3,131,532	+				-1.7
3,131,574	-				-0.3
3,131,672	+				-1.8
3,131,723	+				-0.6
3,131,724	-				+0.3
3,131,738	+				-2.2
3,131,796	+				+1.0
3,131,799	+				-2.8
3,131,799	+				-0.9
3,131,800	-				-0.4
3,131,838	+				+0.4
3,131,839	-				-2.3
3,131,847	-				-0.5
3,131,863	+				-2.0
3,131,863	+				-1.5
3,131,864	-				-2.9
3,131,869	+				-0.5
3,131,869	+				-2.7
3,131,869	+				-0.4
3,131,870	-				+0.2
3,131,870	-				-1.7
3,131,870	-				-2.6
3,131,870	-				-1.8
3,131,873	+				-0.9
3,131,874	-				-0.5
3,131,915	-				-1.6
3,131,915	-				-2.8
3,131,915	-				-0.1
3,131,953	+				-1.0
3,132,089	+				-0.0
3,132,090	-				+3.3
3,132,214	-		DDA3937_RS13755	0.10	+3.1
3,132,214	-		DDA3937_RS13755	0.10	+0.6
3,132,214	-		DDA3937_RS13755	0.10	-2.2
3,132,249	+		DDA3937_RS13755	0.11	+0.2
3,132,338	-		DDA3937_RS13755	0.13	-0.5
3,132,362	+		DDA3937_RS13755	0.14	-0.3
3,132,366	+		DDA3937_RS13755	0.14	-0.2
3,132,366	+		DDA3937_RS13755	0.14	-0.3
3,132,366	+		DDA3937_RS13755	0.14	+0.5
3,132,366	+		DDA3937_RS13755	0.14	-0.1
3,132,366	+		DDA3937_RS13755	0.14	+0.2
3,132,367	-		DDA3937_RS13755	0.14	-3.0
3,132,367	-		DDA3937_RS13755	0.14	+1.6
3,132,367	-		DDA3937_RS13755	0.14	-3.2
3,132,367	-		DDA3937_RS13755	0.14	-2.0
3,132,367	-		DDA3937_RS13755	0.14	+0.2
3,132,367	-		DDA3937_RS13755	0.14	+1.2
3,132,370	-		DDA3937_RS13755	0.14	-1.8
3,132,560	-		DDA3937_RS13755	0.19	+0.6
3,132,560	-		DDA3937_RS13755	0.19	-0.6
3,132,698	-		DDA3937_RS13755	0.23	-0.9
3,132,704	-		DDA3937_RS13755	0.23	-1.2
3,132,784	+		DDA3937_RS13755	0.25	-2.7
3,132,784	+		DDA3937_RS13755	0.25	-0.7
3,132,785	-		DDA3937_RS13755	0.25	-0.6
3,132,911	-		DDA3937_RS13755	0.28	+0.7
3,132,911	-		DDA3937_RS13755	0.28	-2.6
3,132,911	-		DDA3937_RS13755	0.28	+0.4
3,133,010	-		DDA3937_RS13755	0.31	-0.3
3,133,070	-		DDA3937_RS13755	0.32	-0.6
3,133,130	-		DDA3937_RS13755	0.34	+0.8
3,133,189	+		DDA3937_RS13755	0.35	-1.2
3,133,258	+		DDA3937_RS13755	0.37	-1.1
3,133,259	-		DDA3937_RS13755	0.37	-0.7
3,133,381	+		DDA3937_RS13755	0.40	-0.4
3,133,381	+		DDA3937_RS13755	0.40	-0.4
3,133,388	-		DDA3937_RS13755	0.40	-0.9
3,133,388	-		DDA3937_RS13755	0.40	-2.0
3,133,481	-		DDA3937_RS13755	0.43	+0.5
3,133,639	+		DDA3937_RS13755	0.47	+1.5
3,133,779	+		DDA3937_RS13755	0.50	-0.3
3,133,832	-		DDA3937_RS13755	0.52	+1.2
3,133,832	-		DDA3937_RS13755	0.52	+0.0
3,133,832	-		DDA3937_RS13755	0.52	+0.2
3,134,023	+		DDA3937_RS13755	0.56	-1.6
3,134,023	+		DDA3937_RS13755	0.56	+0.7
3,134,029	+		DDA3937_RS13755	0.57	-1.3
3,134,144	-		DDA3937_RS13755	0.60	-0.5
3,134,144	-		DDA3937_RS13755	0.60	+0.3
3,134,272	+		DDA3937_RS13755	0.63	-3.8
3,134,272	+		DDA3937_RS13755	0.63	-1.2
3,134,273	-		DDA3937_RS13755	0.63	+0.5
3,134,273	-		DDA3937_RS13755	0.63	+0.1
3,134,273	-		DDA3937_RS13755	0.63	-1.2
3,134,273	-		DDA3937_RS13755	0.63	+0.7
3,134,279	-		DDA3937_RS13755	0.63	+0.2
3,134,279	-		DDA3937_RS13755	0.63	-0.8
3,134,281	+				-1.3
3,134,281	+		DDA3937_RS13755	0.63	+0.4
3,134,282	-		DDA3937_RS13755	0.63	-1.6
3,134,282	-		DDA3937_RS13755	0.63	+1.8
3,134,290	+		DDA3937_RS13755	0.63	-0.4
3,134,342	-		DDA3937_RS13755	0.65	+0.5
3,134,382	+		DDA3937_RS13755	0.66	+0.5
3,134,610	-		DDA3937_RS13755	0.71	+0.4
3,134,621	-		DDA3937_RS13755	0.72	+0.1
3,134,632	+		DDA3937_RS13755	0.72	-0.4
3,134,632	+		DDA3937_RS13755	0.72	+1.0
3,134,633	-		DDA3937_RS13755	0.72	+0.3
3,134,643	+		DDA3937_RS13755	0.72	-1.2
3,134,643	+		DDA3937_RS13755	0.72	+0.2
3,134,644	-		DDA3937_RS13755	0.72	-0.0
3,134,644	-		DDA3937_RS13755	0.72	+0.6
3,134,644	-		DDA3937_RS13755	0.72	-1.5
3,134,674	+		DDA3937_RS13755	0.73	-0.4
3,134,797	+		DDA3937_RS13755	0.76	+0.4
3,134,878	+		DDA3937_RS13755	0.78	+1.5
3,134,878	+		DDA3937_RS13755	0.78	-2.1
3,134,878	+		DDA3937_RS13755	0.78	+1.6
3,134,879	-		DDA3937_RS13755	0.78	-1.6
3,134,933	+		DDA3937_RS13755	0.80	-0.2
3,134,987	+		DDA3937_RS13755	0.81	-0.0
3,135,151	+		DDA3937_RS13755	0.85	-0.2
3,135,152	-		DDA3937_RS13755	0.85	-0.3
3,135,152	-		DDA3937_RS13755	0.85	+1.0
3,135,152	-		DDA3937_RS13755	0.85	-0.7
3,135,152	-		DDA3937_RS13755	0.85	+1.0
3,135,152	-		DDA3937_RS13755	0.85	-1.6
3,135,900	+		DDA3937_RS13760	0.39	-0.5
3,135,900	+		DDA3937_RS13760	0.39	+1.0
3,135,900	+		DDA3937_RS13760	0.39	-0.9
3,136,002	+		DDA3937_RS13760	0.64	+0.2
3,136,002	+		DDA3937_RS13760	0.64	-0.4
3,136,002	+		DDA3937_RS13760	0.64	-0.8
3,136,003	-		DDA3937_RS13760	0.64	+0.3
3,136,003	-		DDA3937_RS13760	0.64	-1.9
3,136,143	+				-0.0
3,136,143	+				-0.1
3,136,143	+				-2.2
3,136,152	-				-0.7
3,136,296	-				+0.4
3,136,481	+		DDA3937_RS13765	0.17	-0.2
3,136,481	+		DDA3937_RS13765	0.17	-1.2
3,136,482	-		DDA3937_RS13765	0.17	-0.3
3,136,530	-		DDA3937_RS13765	0.20	+0.1