Strain Fitness in Dickeya dadantii 3937 around DDA3937_RS09270

Experiment: M9+glycerol

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	M9+glycerol
2,083,171	+		DDA3937_RS09265	0.39	-3.1
2,083,171	+		DDA3937_RS09265	0.39	-0.8
2,083,217	-		DDA3937_RS09265	0.42	+0.7
2,083,217	-		DDA3937_RS09265	0.42	-0.1
2,083,355	+		DDA3937_RS09265	0.51	-2.1
2,083,355	+		DDA3937_RS09265	0.51	-1.0
2,083,355	+		DDA3937_RS09265	0.51	+0.9
2,083,355	+		DDA3937_RS09265	0.51	-1.1
2,083,356	-		DDA3937_RS09265	0.51	-0.8
2,083,356	-		DDA3937_RS09265	0.51	+0.4
2,083,356	-		DDA3937_RS09265	0.51	-1.1
2,083,357	+		DDA3937_RS09265	0.52	-2.2
2,083,358	-		DDA3937_RS09265	0.52	-1.2
2,083,394	+		DDA3937_RS09265	0.54	-0.7
2,083,395	-		DDA3937_RS09265	0.54	-2.1
2,083,547	+		DDA3937_RS09265	0.64	-0.2
2,083,547	+		DDA3937_RS09265	0.64	-1.5
2,083,547	+		DDA3937_RS09265	0.64	-2.2
2,083,547	+		DDA3937_RS09265	0.64	+0.2
2,083,548	-		DDA3937_RS09265	0.64	-0.7
2,083,548	-		DDA3937_RS09265	0.64	+1.5
2,083,548	-		DDA3937_RS09265	0.64	+0.9
2,083,548	-		DDA3937_RS09265	0.64	-0.2
2,083,548	-		DDA3937_RS09265	0.64	-0.6
2,083,548	-		DDA3937_RS09265	0.64	-1.3
2,083,548	-		DDA3937_RS09265	0.64	+0.1
2,083,548	-		DDA3937_RS09265	0.64	-0.2
2,083,561	+		DDA3937_RS09265	0.65	+0.0
2,083,562	-		DDA3937_RS09265	0.65	-2.7
2,083,571	-		DDA3937_RS09265	0.66	+1.6
2,083,646	+		DDA3937_RS09265	0.71	-1.5
2,083,646	+		DDA3937_RS09265	0.71	-2.1
2,083,710	-		DDA3937_RS09265	0.75	-0.9
2,083,710	-		DDA3937_RS09265	0.75	-0.4
2,083,726	+		DDA3937_RS09265	0.76	+0.6
2,083,801	+		DDA3937_RS09265	0.81	-0.3
2,083,802	-		DDA3937_RS09265	0.81	-1.1
2,083,802	-		DDA3937_RS09265	0.81	-0.7
2,083,875	+		DDA3937_RS09265	0.86	-0.8
2,083,875	+		DDA3937_RS09265	0.86	-0.2
2,083,876	-		DDA3937_RS09265	0.86	+0.9
2,083,888	+		DDA3937_RS09265	0.87	-1.9
2,083,888	+		DDA3937_RS09265	0.87	-1.0
2,083,891	+		DDA3937_RS09265	0.87	+2.1
2,083,892	-		DDA3937_RS09265	0.88	+2.2
2,083,907	+		DDA3937_RS09265	0.89	+0.7
2,083,907	+		DDA3937_RS09265	0.89	-0.1
2,083,908	-		DDA3937_RS09265	0.89	+2.0
2,083,908	-		DDA3937_RS09265	0.89	-0.7
2,083,908	-		DDA3937_RS09265	0.89	+0.3
2,083,958	+				+1.7
2,083,958	+				-1.4
2,083,958	+				-1.9
2,083,958	+				-1.9
2,083,958	+				-1.0
2,083,959	-				-0.4
2,083,959	-				-1.4
2,083,959	-				+0.1
2,084,007	+				-0.7
2,084,007	+				-0.3
2,084,007	+				-0.2
2,084,007	+				+1.1
2,084,056	+				-0.0
2,084,056	+				-1.8
2,084,057	-				-1.0
2,084,071	+				+0.5
2,084,071	+				-0.6
2,084,071	+				-1.1
2,084,072	-				+1.1
2,084,072	-				-0.6
2,084,072	-				-0.9
2,084,072	-				-1.2
2,084,072	-				-0.8
2,084,072	-				+0.7
2,084,075	+				-0.2
2,084,138	-				-0.3
2,084,174	-				+1.7
2,084,204	-				+0.7
2,084,247	-				-2.6
2,084,256	+				+1.5
2,084,257	-				-0.4
2,084,505	+		DDA3937_RS09270	0.29	-1.7
2,084,553	-		DDA3937_RS09270	0.33	+0.1
2,084,559	+		DDA3937_RS09270	0.34	-0.2
2,084,560	-		DDA3937_RS09270	0.34	-1.9
2,084,560	-		DDA3937_RS09270	0.34	-0.8
2,084,652	+		DDA3937_RS09270	0.42	+0.1
2,084,654	+		DDA3937_RS09270	0.42	-0.4
2,084,654	+		DDA3937_RS09270	0.42	+1.9
2,084,654	+		DDA3937_RS09270	0.42	-1.2
2,084,654	+		DDA3937_RS09270	0.42	+1.7
2,084,654	+		DDA3937_RS09270	0.42	-0.6
2,084,655	-		DDA3937_RS09270	0.42	-1.4
2,084,655	-		DDA3937_RS09270	0.42	-0.5
2,084,655	-		DDA3937_RS09270	0.42	+0.0
2,084,655	-		DDA3937_RS09270	0.42	-1.4
2,084,655	-		DDA3937_RS09270	0.42	-1.1
2,084,655	-		DDA3937_RS09270	0.42	-2.7
2,084,655	-		DDA3937_RS09270	0.42	-1.1
2,084,655	-		DDA3937_RS09270	0.42	+0.3
2,084,660	+		DDA3937_RS09270	0.42	-0.5
2,084,660	+		DDA3937_RS09270	0.42	+0.2
2,084,661	-		DDA3937_RS09270	0.42	-1.0
2,084,703	-		DDA3937_RS09270	0.46	-0.4
2,084,707	-		DDA3937_RS09270	0.46	-0.4
2,084,859	-		DDA3937_RS09270	0.59	-0.7
2,084,859	-		DDA3937_RS09270	0.59	+1.7
2,085,030	+		DDA3937_RS09270	0.73	-0.2
2,085,043	-				+0.3
2,085,176	+		DDA3937_RS09270	0.86	+0.5
2,085,176	+		DDA3937_RS09270	0.86	+0.2
2,085,176	+		DDA3937_RS09270	0.86	+0.2
2,085,176	+		DDA3937_RS09270	0.86	-0.4
2,085,176	+		DDA3937_RS09270	0.86	-0.1
2,085,176	+		DDA3937_RS09270	0.86	-2.4
2,085,177	-		DDA3937_RS09270	0.86	-0.7
2,085,177	-		DDA3937_RS09270	0.86	-1.0
2,085,177	-		DDA3937_RS09270	0.86	-0.9
2,085,177	-		DDA3937_RS09270	0.86	-1.1
2,085,177	-		DDA3937_RS09270	0.86	-0.5
2,085,345	+				-0.2
2,085,378	+				-1.5
2,085,378	+				+0.2
2,085,378	+				-1.5
2,085,378	+				-2.9
2,085,378	+				-0.9
2,085,378	+				-0.9
2,085,378	+				-0.1
2,085,378	+				+1.8
2,085,378	+				+1.1
2,085,378	+				-0.7
2,085,378	+				-1.2
2,085,378	+				-0.5
2,085,378	+				-2.2
2,085,379	-				+1.4
2,085,379	-				-0.8
2,085,379	-				-0.0
2,085,379	-				+1.2
2,085,379	-				-0.1
2,085,379	-				+0.1
2,085,383	+				+0.1
2,085,383	+				+1.3
2,085,383	+				-0.7
2,085,571	+				-0.1
2,085,571	+				-0.7
2,085,571	+				-0.2
2,085,572	-				-1.9
2,085,572	-				+0.6
2,085,572	-				-0.1
2,085,575	+				+0.5
2,085,664	+				+3.9
2,086,167	+				-0.1
2,086,168	-				-2.1
2,086,170	-				-1.4
2,086,170	-				-0.4
2,086,170	-				+1.0
2,086,170	-				-1.9
2,086,170	-				+0.1
2,086,298	-		DDA3937_RS09275	0.13	-0.1