Strain Fitness in Dickeya dadantii 3937 around DDA3937_RS07200

Experiment: M9+glycerol

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	M9+glycerol
1,621,700	+				-2.1
1,621,701	-				+0.3
1,621,808	+				+0.1
1,621,809	-				+0.4
1,621,809	-				-0.9
1,621,813	+				-0.9
1,621,813	+				-1.7
1,621,813	+				-2.2
1,621,813	+				+0.2
1,621,813	+				-1.5
1,621,813	+				-2.3
1,621,813	+				+0.7
1,621,813	+				-0.2
1,621,813	+				-2.2
1,621,814	-				+0.0
1,621,814	-				-1.2
1,621,814	-				-1.1
1,621,824	+				-0.9
1,621,824	+				+0.5
1,621,840	+				-1.5
1,621,840	+				+0.1
1,621,840	+				+0.6
1,621,849	-				-0.7
1,621,849	-				+0.1
1,622,026	+		DDA3937_RS07195	0.29	-0.2
1,622,026	+		DDA3937_RS07195	0.29	-0.9
1,622,027	-		DDA3937_RS07195	0.29	-0.5
1,622,027	-		DDA3937_RS07195	0.29	+0.8
1,622,126	+		DDA3937_RS07195	0.43	-0.2
1,622,127	-		DDA3937_RS07195	0.43	-0.9
1,622,127	-		DDA3937_RS07195	0.43	-1.5
1,622,160	-		DDA3937_RS07195	0.48	-1.9
1,622,214	-		DDA3937_RS07195	0.56	-0.5
1,622,214	-		DDA3937_RS07195	0.56	+0.6
1,622,280	+		DDA3937_RS07195	0.65	-0.8
1,622,312	+		DDA3937_RS07195	0.70	-1.7
1,622,312	+		DDA3937_RS07195	0.70	-1.0
1,622,313	-		DDA3937_RS07195	0.70	+0.1
1,622,364	+		DDA3937_RS07195	0.77	-1.2
1,622,371	+		DDA3937_RS07195	0.78	-0.5
1,622,623	-				-1.5
1,622,623	-				+0.7
1,622,634	+				-0.5
1,622,727	-		DDA3937_RS07200	0.14	-1.5
1,622,727	-				+1.1
1,622,800	+		DDA3937_RS07200	0.20	-0.6
1,622,801	-		DDA3937_RS07200	0.20	+0.4
1,622,801	-		DDA3937_RS07200	0.20	-1.2
1,622,801	-		DDA3937_RS07200	0.20	+0.1
1,622,801	-		DDA3937_RS07200	0.20	-0.7
1,622,801	-		DDA3937_RS07200	0.20	-0.8
1,622,871	-		DDA3937_RS07200	0.25	-1.5
1,622,895	-		DDA3937_RS07200	0.26	-1.3
1,622,939	+		DDA3937_RS07200	0.29	-0.2
1,622,940	-		DDA3937_RS07200	0.29	+0.9
1,623,047	-		DDA3937_RS07200	0.37	-1.9
1,623,047	-		DDA3937_RS07200	0.37	-0.2
1,623,244	-		DDA3937_RS07200	0.51	-1.3
1,623,244	-		DDA3937_RS07200	0.51	+0.4
1,623,261	+		DDA3937_RS07200	0.52	-1.9
1,623,261	+		DDA3937_RS07200	0.52	+1.9
1,623,261	+		DDA3937_RS07200	0.52	+0.7
1,623,261	+		DDA3937_RS07200	0.52	+0.0
1,623,262	-		DDA3937_RS07200	0.52	-1.7
1,623,262	-		DDA3937_RS07200	0.52	-0.9
1,623,264	+		DDA3937_RS07200	0.52	-0.2
1,623,264	+		DDA3937_RS07200	0.52	+0.5
1,623,264	+		DDA3937_RS07200	0.52	-1.6
1,623,264	+		DDA3937_RS07200	0.52	-1.1
1,623,264	+		DDA3937_RS07200	0.52	-2.0
1,623,264	+		DDA3937_RS07200	0.52	-1.5
1,623,265	-		DDA3937_RS07200	0.52	-1.5
1,623,265	-		DDA3937_RS07200	0.52	-1.9
1,623,265	-		DDA3937_RS07200	0.52	-2.3
1,623,330	+		DDA3937_RS07200	0.57	+0.1
1,623,331	-		DDA3937_RS07200	0.57	-1.2
1,623,331	-		DDA3937_RS07200	0.57	-0.5
1,623,331	-		DDA3937_RS07200	0.57	+0.5
1,623,445	+		DDA3937_RS07200	0.65	-1.7
1,623,446	-		DDA3937_RS07200	0.65	-0.6
1,623,527	+		DDA3937_RS07200	0.70	+1.5
1,623,528	-				+0.1
1,623,528	-		DDA3937_RS07200	0.71	+0.8
1,623,528	-		DDA3937_RS07200	0.71	-0.5
1,623,571	+		DDA3937_RS07200	0.74	+0.1
1,623,571	+		DDA3937_RS07200	0.74	-1.9
1,623,572	-		DDA3937_RS07200	0.74	-0.7
1,623,656	-		DDA3937_RS07200	0.79	-4.1
1,623,660	+		DDA3937_RS07200	0.80	-1.3
1,623,660	+		DDA3937_RS07200	0.80	-0.3
1,623,660	+		DDA3937_RS07200	0.80	-1.1
1,623,661	-		DDA3937_RS07200	0.80	+1.7
1,623,661	-		DDA3937_RS07200	0.80	-0.4
1,623,661	-		DDA3937_RS07200	0.80	+0.3
1,623,661	-		DDA3937_RS07200	0.80	-2.9
1,623,662	+		DDA3937_RS07200	0.80	-0.6
1,623,697	+		DDA3937_RS07200	0.82	-1.7
1,623,737	+		DDA3937_RS07200	0.85	+0.1
1,623,743	+		DDA3937_RS07200	0.86	+1.7
1,623,743	+		DDA3937_RS07200	0.86	-1.6
1,623,744	-		DDA3937_RS07200	0.86	-0.5
1,623,744	-		DDA3937_RS07200	0.86	-0.0
1,623,885	+				+1.0
1,623,885	+				-0.3
1,623,886	-				-0.8
1,623,886	-				+1.2
1,623,944	+				-0.3
1,623,945	-				+1.1
1,623,945	-				+2.6
1,624,067	+		DDA3937_RS07205	0.15	-0.0
1,624,067	+		DDA3937_RS07205	0.15	+3.1
1,624,068	-		DDA3937_RS07205	0.15	-0.6
1,624,096	+		DDA3937_RS07205	0.19	+0.2
1,624,278	-		DDA3937_RS07205	0.44	-0.9
1,624,278	-		DDA3937_RS07205	0.44	-0.4
1,624,278	-		DDA3937_RS07205	0.44	-1.5
1,624,418	+		DDA3937_RS07205	0.64	-0.5
1,624,418	+		DDA3937_RS07205	0.64	+0.9
1,624,419	-		DDA3937_RS07205	0.64	-0.1
1,624,458	+		DDA3937_RS07205	0.69	-0.2
1,624,526	+		DDA3937_RS07205	0.79	+0.0
1,624,526	+		DDA3937_RS07205	0.79	-1.9
1,624,527	-		DDA3937_RS07205	0.79	-0.5
1,624,527	-		DDA3937_RS07205	0.79	+2.8
1,624,686	-				-0.1
1,624,686	-				+1.1
1,624,686	-				-0.5
1,624,686	-				-0.6
1,624,699	+				+0.6
1,624,700	-				-0.0
1,624,715	-				-0.2
1,624,739	-				-1.2
1,624,745	-				+0.0
1,624,760	-				+1.1
1,624,865	+				-0.6
1,624,911	+				+0.0
1,624,912	-				+0.3
1,624,912	-				-1.5
1,624,912	-				-1.5
1,624,912	-				+0.2
1,624,915	-				+1.3
1,624,915	-				-0.6
1,624,918	+				-1.2
1,624,918	+				-0.9
1,624,919	-				+0.8
1,624,919	-				+0.0
1,624,919	-				-0.9
1,624,919	-				-0.2
1,624,924	+				+2.9
1,624,925	-				-0.4
1,624,944	+		DDA3937_RS07210	0.12	+0.1
1,624,944	+		DDA3937_RS07210	0.12	-2.2
1,624,944	+		DDA3937_RS07210	0.12	+0.4