Experiment: M9+glycerol
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DDA3937_RS21355 and DDA3937_RS21360 are separated by 42 nucleotides DDA3937_RS21360 and DDA3937_RS21365 overlap by 4 nucleotides DDA3937_RS21365 and DDA3937_RS21370 overlap by 4 nucleotides
DDA3937_RS21355: DDA3937_RS21355 - LysR family transcriptional regulator, at 4,863,505 to 4,864,455
_RS21355
DDA3937_RS21360: DDA3937_RS21360 - 4-amino-4-deoxy-L-arabinose-phospho-UDP flippase, at 4,864,498 to 4,864,896
_RS21360
DDA3937_RS21365: DDA3937_RS21365 - 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnE, at 4,864,893 to 4,865,234
_RS21365
DDA3937_RS21370: DDA3937_RS21370 - lipid IV(A) 4-amino-4-deoxy-L-arabinosyltransferase, at 4,865,231 to 4,866,889
_RS21370
Position (kb) 4864
4865
4866 Strain fitness (log2 ratio) -2
-1
0
1
2 at 4864.020 kb on + strand, within DDA3937_RS21355 at 4864.020 kb on + strand, within DDA3937_RS21355 at 4864.021 kb on - strand, within DDA3937_RS21355 at 4864.021 kb on - strand at 4864.042 kb on + strand, within DDA3937_RS21355 at 4864.042 kb on + strand, within DDA3937_RS21355 at 4864.042 kb on + strand, within DDA3937_RS21355 at 4864.042 kb on + strand, within DDA3937_RS21355 at 4864.042 kb on + strand, within DDA3937_RS21355 at 4864.042 kb on + strand, within DDA3937_RS21355 at 4864.042 kb on + strand, within DDA3937_RS21355 at 4864.043 kb on - strand at 4864.043 kb on - strand, within DDA3937_RS21355 at 4864.043 kb on - strand, within DDA3937_RS21355 at 4864.068 kb on + strand, within DDA3937_RS21355 at 4864.128 kb on + strand, within DDA3937_RS21355 at 4864.129 kb on - strand, within DDA3937_RS21355 at 4864.129 kb on - strand, within DDA3937_RS21355 at 4864.162 kb on + strand, within DDA3937_RS21355 at 4864.163 kb on - strand, within DDA3937_RS21355 at 4864.195 kb on - strand, within DDA3937_RS21355 at 4864.308 kb on + strand, within DDA3937_RS21355 at 4864.309 kb on - strand, within DDA3937_RS21355 at 4864.309 kb on - strand, within DDA3937_RS21355 at 4864.357 kb on + strand, within DDA3937_RS21355 at 4864.358 kb on - strand, within DDA3937_RS21355 at 4864.358 kb on - strand, within DDA3937_RS21355 at 4864.358 kb on - strand, within DDA3937_RS21355 at 4864.360 kb on + strand, within DDA3937_RS21355 at 4864.360 kb on + strand, within DDA3937_RS21355 at 4864.453 kb on + strand at 4864.453 kb on + strand at 4864.453 kb on + strand at 4864.453 kb on + strand at 4864.453 kb on + strand at 4864.453 kb on + strand at 4864.454 kb on - strand at 4864.454 kb on - strand at 4864.457 kb on + strand at 4864.457 kb on + strand at 4864.457 kb on + strand at 4864.458 kb on - strand at 4864.465 kb on + strand at 4865.281 kb on - strand at 4865.281 kb on - strand at 4865.342 kb on + strand at 4865.342 kb on + strand at 4865.343 kb on - strand at 4865.433 kb on + strand, within DDA3937_RS21370 at 4865.457 kb on + strand, within DDA3937_RS21370 at 4865.457 kb on + strand, within DDA3937_RS21370 at 4865.458 kb on - strand, within DDA3937_RS21370 at 4865.458 kb on - strand, within DDA3937_RS21370 at 4865.458 kb on - strand, within DDA3937_RS21370 at 4865.504 kb on + strand, within DDA3937_RS21370 at 4865.527 kb on + strand, within DDA3937_RS21370 at 4865.528 kb on - strand, within DDA3937_RS21370 at 4865.528 kb on - strand, within DDA3937_RS21370 at 4865.528 kb on - strand, within DDA3937_RS21370 at 4865.529 kb on + strand, within DDA3937_RS21370 at 4865.529 kb on + strand, within DDA3937_RS21370 at 4865.529 kb on + strand, within DDA3937_RS21370 at 4865.530 kb on - strand, within DDA3937_RS21370 at 4865.530 kb on - strand, within DDA3937_RS21370 at 4865.766 kb on + strand, within DDA3937_RS21370 at 4865.845 kb on + strand, within DDA3937_RS21370 at 4865.940 kb on + strand, within DDA3937_RS21370 at 4865.940 kb on + strand, within DDA3937_RS21370 at 4865.941 kb on - strand, within DDA3937_RS21370 at 4865.941 kb on - strand, within DDA3937_RS21370 at 4865.941 kb on - strand, within DDA3937_RS21370 at 4865.941 kb on - strand, within DDA3937_RS21370 at 4866.007 kb on - strand, within DDA3937_RS21370 at 4866.007 kb on - strand, within DDA3937_RS21370 at 4866.007 kb on - strand, within DDA3937_RS21370 at 4866.047 kb on + strand, within DDA3937_RS21370 at 4866.108 kb on + strand at 4866.108 kb on + strand, within DDA3937_RS21370 at 4866.108 kb on + strand at 4866.163 kb on + strand, within DDA3937_RS21370 at 4866.163 kb on + strand, within DDA3937_RS21370 at 4866.184 kb on - strand, within DDA3937_RS21370
Per-strain Table
Position Strand Gene LocusTag Fraction M9+glycerol remove 4,864,020 + DDA3937_RS21355 0.54 -0.5 4,864,020 + DDA3937_RS21355 0.54 +0.6 4,864,021 - DDA3937_RS21355 0.54 -0.0 4,864,021 - +2.0 4,864,042 + DDA3937_RS21355 0.56 -0.3 4,864,042 + DDA3937_RS21355 0.56 +0.1 4,864,042 + DDA3937_RS21355 0.56 -0.8 4,864,042 + DDA3937_RS21355 0.56 -0.1 4,864,042 + DDA3937_RS21355 0.56 +0.8 4,864,042 + DDA3937_RS21355 0.56 -0.9 4,864,042 + DDA3937_RS21355 0.56 -0.2 4,864,043 - +0.4 4,864,043 - DDA3937_RS21355 0.57 -0.3 4,864,043 - DDA3937_RS21355 0.57 +0.4 4,864,068 + DDA3937_RS21355 0.59 +0.7 4,864,128 + DDA3937_RS21355 0.66 -1.6 4,864,129 - DDA3937_RS21355 0.66 +1.4 4,864,129 - DDA3937_RS21355 0.66 +0.1 4,864,162 + DDA3937_RS21355 0.69 +0.8 4,864,163 - DDA3937_RS21355 0.69 -0.7 4,864,195 - DDA3937_RS21355 0.73 -0.1 4,864,308 + DDA3937_RS21355 0.84 +0.6 4,864,309 - DDA3937_RS21355 0.85 +0.0 4,864,309 - DDA3937_RS21355 0.85 -0.4 4,864,357 + DDA3937_RS21355 0.90 +0.2 4,864,358 - DDA3937_RS21355 0.90 -0.4 4,864,358 - DDA3937_RS21355 0.90 +0.4 4,864,358 - DDA3937_RS21355 0.90 -0.3 4,864,360 + DDA3937_RS21355 0.90 -1.6 4,864,360 + DDA3937_RS21355 0.90 +0.8 4,864,453 + +0.6 4,864,453 + +0.8 4,864,453 + +2.0 4,864,453 + -0.4 4,864,453 + +0.2 4,864,453 + +1.6 4,864,454 - -1.4 4,864,454 - -0.4 4,864,457 + +0.6 4,864,457 + -2.4 4,864,457 + +0.3 4,864,458 - -0.0 4,864,465 + -2.2 4,865,281 - +0.7 4,865,281 - +0.1 4,865,342 + +0.9 4,865,342 + +0.3 4,865,343 - +1.2 4,865,433 + DDA3937_RS21370 0.12 +1.4 4,865,457 + DDA3937_RS21370 0.14 +0.8 4,865,457 + DDA3937_RS21370 0.14 -0.0 4,865,458 - DDA3937_RS21370 0.14 -0.2 4,865,458 - DDA3937_RS21370 0.14 -0.6 4,865,458 - DDA3937_RS21370 0.14 +0.1 4,865,504 + DDA3937_RS21370 0.16 +2.1 4,865,527 + DDA3937_RS21370 0.18 +0.3 4,865,528 - DDA3937_RS21370 0.18 +0.8 4,865,528 - DDA3937_RS21370 0.18 +0.6 4,865,528 - DDA3937_RS21370 0.18 +1.4 4,865,529 + DDA3937_RS21370 0.18 -1.1 4,865,529 + DDA3937_RS21370 0.18 -1.8 4,865,529 + DDA3937_RS21370 0.18 +1.1 4,865,530 - DDA3937_RS21370 0.18 +0.7 4,865,530 - DDA3937_RS21370 0.18 +0.8 4,865,766 + DDA3937_RS21370 0.32 +0.7 4,865,845 + DDA3937_RS21370 0.37 +0.2 4,865,940 + DDA3937_RS21370 0.43 +2.3 4,865,940 + DDA3937_RS21370 0.43 +1.8 4,865,941 - DDA3937_RS21370 0.43 +2.2 4,865,941 - DDA3937_RS21370 0.43 -1.6 4,865,941 - DDA3937_RS21370 0.43 +0.6 4,865,941 - DDA3937_RS21370 0.43 +0.9 4,866,007 - DDA3937_RS21370 0.47 +0.8 4,866,007 - DDA3937_RS21370 0.47 +0.4 4,866,007 - DDA3937_RS21370 0.47 -0.9 4,866,047 + DDA3937_RS21370 0.49 -0.5 4,866,108 + +0.4 4,866,108 + DDA3937_RS21370 0.53 +0.5 4,866,108 + +1.4 4,866,163 + DDA3937_RS21370 0.56 -1.2 4,866,163 + DDA3937_RS21370 0.56 +0.2 4,866,184 - DDA3937_RS21370 0.57 +0.5
Or see this region's nucleotide sequence