Strain Fitness in Dickeya dadantii 3937 around DDA3937_RS16185

Experiment: M9+glycerol

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	M9+glycerol
3,693,854	-				-0.3
3,693,854	-				+0.2
3,693,854	-				+0.5
3,693,856	-				-0.5
3,693,925	+				+0.1
3,693,925	+				+0.5
3,693,926	-				-0.7
3,693,926	-				-0.8
3,693,926	-				+0.2
3,693,927	+				-1.0
3,693,927	+				-0.5
3,693,928	-				-0.6
3,693,928	-				+0.1
3,693,928	-				+0.4
3,693,944	-				-2.2
3,693,954	+				-0.0
3,693,961	+				-0.1
3,693,962	-				-0.9
3,693,967	-				-0.4
3,693,967	-				+0.1
3,693,967	-				-1.7
3,693,972	+				-0.6
3,693,972	+				+1.3
3,693,972	+				-1.4
3,693,972	+				+1.7
3,693,972	+				-0.3
3,693,973	-				-2.0
3,693,973	-				-2.4
3,693,973	-				-1.4
3,693,973	-				-1.4
3,693,992	+				-2.2
3,693,993	-				+0.1
3,693,993	-				+0.1
3,693,993	-				+0.7
3,694,006	+				-1.7
3,694,007	-				-0.7
3,694,007	-				-1.3
3,694,029	+				-1.5
3,694,030	-				-0.8
3,694,030	-				-0.8
3,694,120	+		DDA3937_RS16185	0.18	-1.9
3,694,120	+		DDA3937_RS16185	0.18	-1.1
3,694,121	-		DDA3937_RS16185	0.19	-0.5
3,694,121	-		DDA3937_RS16185	0.19	+0.5
3,694,121	-		DDA3937_RS16185	0.19	-1.7
3,694,128	+		DDA3937_RS16185	0.19	-1.3
3,694,129	-		DDA3937_RS16185	0.20	+1.3
3,694,185	+		DDA3937_RS16185	0.27	-2.3
3,694,185	+		DDA3937_RS16185	0.27	-1.5
3,694,186	-		DDA3937_RS16185	0.27	-1.3
3,694,195	-				+2.1
3,694,217	+		DDA3937_RS16185	0.31	-0.6
3,694,217	+		DDA3937_RS16185	0.31	-1.9
3,694,217	+		DDA3937_RS16185	0.31	+0.1
3,694,218	-		DDA3937_RS16185	0.31	-1.4
3,694,218	-		DDA3937_RS16185	0.31	-1.6
3,694,258	+		DDA3937_RS16185	0.36	-1.3
3,694,258	+		DDA3937_RS16185	0.36	-1.6
3,694,259	-		DDA3937_RS16185	0.36	-1.3
3,694,259	-		DDA3937_RS16185	0.36	+0.6
3,694,259	-		DDA3937_RS16185	0.36	-2.5
3,694,259	-		DDA3937_RS16185	0.36	-3.3
3,694,260	+		DDA3937_RS16185	0.36	+0.5
3,694,260	+		DDA3937_RS16185	0.36	-2.3
3,694,260	+		DDA3937_RS16185	0.36	-0.3
3,694,260	+		DDA3937_RS16185	0.36	-1.7
3,694,260	+		DDA3937_RS16185	0.36	+0.6
3,694,260	+		DDA3937_RS16185	0.36	+0.7
3,694,260	+		DDA3937_RS16185	0.36	-0.2
3,694,260	+		DDA3937_RS16185	0.36	-0.1
3,694,261	-				-0.5
3,694,261	-		DDA3937_RS16185	0.36	-1.4
3,694,275	+		DDA3937_RS16185	0.38	-0.5
3,694,275	+		DDA3937_RS16185	0.38	+0.1
3,694,276	-		DDA3937_RS16185	0.38	-2.7
3,694,311	+		DDA3937_RS16185	0.43	-1.6
3,694,312	-		DDA3937_RS16185	0.43	+0.4
3,694,312	-		DDA3937_RS16185	0.43	-0.9
3,694,312	-		DDA3937_RS16185	0.43	+3.3
3,694,315	-		DDA3937_RS16185	0.43	-0.5
3,694,315	-		DDA3937_RS16185	0.43	-0.7
3,694,322	+		DDA3937_RS16185	0.44	-0.5
3,694,322	+		DDA3937_RS16185	0.44	-2.4
3,694,323	-		DDA3937_RS16185	0.44	-2.2
3,694,323	-		DDA3937_RS16185	0.44	+0.5
3,694,323	-		DDA3937_RS16185	0.44	-2.3
3,694,323	-		DDA3937_RS16185	0.44	-0.1
3,694,323	-		DDA3937_RS16185	0.44	-0.5
3,694,323	-		DDA3937_RS16185	0.44	-0.5
3,694,340	+		DDA3937_RS16185	0.46	-1.6
3,694,400	-		DDA3937_RS16185	0.54	+0.6
3,694,400	-		DDA3937_RS16185	0.54	-1.5
3,694,400	-		DDA3937_RS16185	0.54	-1.6
3,694,426	+		DDA3937_RS16185	0.57	-0.0
3,694,426	+		DDA3937_RS16185	0.57	-1.4
3,694,426	+		DDA3937_RS16185	0.57	-1.5
3,694,426	+		DDA3937_RS16185	0.57	-0.5
3,694,426	+		DDA3937_RS16185	0.57	-1.1
3,694,427	-		DDA3937_RS16185	0.57	+1.9
3,694,427	-		DDA3937_RS16185	0.57	-2.4
3,694,541	+		DDA3937_RS16185	0.71	-2.0
3,694,541	+		DDA3937_RS16185	0.71	-0.5
3,694,542	-		DDA3937_RS16185	0.72	-0.9
3,694,554	+		DDA3937_RS16185	0.73	-2.4
3,694,554	+		DDA3937_RS16185	0.73	-1.5
3,694,554	+		DDA3937_RS16185	0.73	+0.1
3,694,555	-		DDA3937_RS16185	0.73	-1.4
3,694,555	-		DDA3937_RS16185	0.73	+0.1
3,694,555	-		DDA3937_RS16185	0.73	-2.5
3,694,558	+		DDA3937_RS16185	0.74	-0.1
3,694,558	+		DDA3937_RS16185	0.74	-1.0
3,694,558	+		DDA3937_RS16185	0.74	-1.7
3,694,558	+		DDA3937_RS16185	0.74	-0.7
3,694,558	+		DDA3937_RS16185	0.74	-1.4
3,694,558	+		DDA3937_RS16185	0.74	-2.2
3,694,558	+		DDA3937_RS16185	0.74	-1.7
3,694,559	-		DDA3937_RS16185	0.74	-2.6
3,694,559	-		DDA3937_RS16185	0.74	-0.3
3,694,559	-		DDA3937_RS16185	0.74	-0.9
3,694,559	-		DDA3937_RS16185	0.74	-1.0
3,694,559	-		DDA3937_RS16185	0.74	-0.7
3,694,559	-		DDA3937_RS16185	0.74	-2.3
3,694,559	-		DDA3937_RS16185	0.74	+1.1
3,694,559	-		DDA3937_RS16185	0.74	-0.4
3,694,559	-		DDA3937_RS16185	0.74	-1.4
3,694,559	-		DDA3937_RS16185	0.74	-0.9
3,694,581	+		DDA3937_RS16185	0.76	+0.1
3,694,630	+		DDA3937_RS16185	0.83	-1.4
3,694,654	+		DDA3937_RS16185	0.86	-1.9
3,694,655	-		DDA3937_RS16185	0.86	-1.4
3,694,726	+				+0.1
3,694,726	+				+0.6
3,694,726	+				-0.5
3,694,727	-				-1.5
3,694,727	-				-0.3
3,694,782	+				-1.3
3,694,783	-				-0.0
3,694,791	+				-0.3
3,694,792	-				-1.3
3,694,792	-				+0.3
3,694,830	+				-0.5
3,694,848	+				+0.3
3,694,848	+				+3.6
3,694,848	+				-0.1
3,694,848	+				-0.5
3,694,848	+				-0.3
3,694,848	+				-1.7
3,694,848	+				-0.8
3,694,849	-				-0.2
3,694,849	-				-0.4
3,694,849	-				-0.2
3,694,849	-				-0.2
3,694,849	-				+0.4
3,694,849	-				-0.3
3,694,849	-				-0.3
3,694,984	+		DDA3937_RS16190	0.24	+0.5
3,694,984	+		DDA3937_RS16190	0.24	-1.3
3,694,984	+		DDA3937_RS16190	0.24	-0.9
3,694,984	+		DDA3937_RS16190	0.24	+0.2
3,694,985	-		DDA3937_RS16190	0.24	-1.3
3,694,985	-				+1.1
3,694,999	+		DDA3937_RS16190	0.27	-0.6
3,694,999	+		DDA3937_RS16190	0.27	+0.4
3,695,000	-		DDA3937_RS16190	0.27	+0.3
3,695,000	-				+3.1
3,695,022	-		DDA3937_RS16190	0.31	+2.5
3,695,040	-		DDA3937_RS16190	0.35	-1.7
3,695,040	-		DDA3937_RS16190	0.35	+1.1
3,695,040	-		DDA3937_RS16190	0.35	-1.9
3,695,040	-		DDA3937_RS16190	0.35	-0.5
3,695,040	-		DDA3937_RS16190	0.35	-1.3
3,695,113	+		DDA3937_RS16190	0.49	-1.8
3,695,113	+		DDA3937_RS16190	0.49	+1.3
3,695,114	-		DDA3937_RS16190	0.49	+0.4
3,695,135	+		DDA3937_RS16190	0.53	+0.1
3,695,144	+		DDA3937_RS16190	0.55	+0.6
3,695,144	+		DDA3937_RS16190	0.55	-0.3
3,695,144	+		DDA3937_RS16190	0.55	-0.9
3,695,247	-		DDA3937_RS16190	0.75	-0.4
3,695,342	+				+0.6
3,695,343	-				-0.7
3,695,354	+				-0.3
3,695,354	+				-1.3
3,695,355	-				+0.1
3,695,355	-				-1.2
3,695,360	+				+0.1
3,695,360	+				-0.2
3,695,360	+				-0.5
3,695,361	-				+0.3
3,695,361	-				-1.3
3,695,364	+				+0.2
3,695,364	+				+0.3
3,695,364	+				-0.5
3,695,365	-				-0.5
3,695,365	-				-1.4
3,695,365	-				-0.5
3,695,365	-				-1.4
3,695,365	-				+0.1
3,695,365	-				+0.7
3,695,365	-				-0.0
3,695,367	+				+0.4
3,695,367	+				+0.5
3,695,368	-				-0.5
3,695,368	-				-1.1
3,695,442	+				+0.4
3,695,442	+				-0.6
3,695,443	-				+0.3
3,695,464	+				-0.5
3,695,465	-				-0.6
3,695,465	-				-0.3
3,695,465	-				-0.1
3,695,479	+				+0.3
3,695,479	+				-0.6
3,695,550	+				+1.1
3,695,565	+				-0.4
3,695,565	+				-1.4
3,695,565	+				-0.1
3,695,566	-				-0.1
3,695,584	+				-0.7
3,695,584	+				-1.3
3,695,584	+				-0.2
3,695,584	+				+1.1
3,695,584	+				-1.5
3,695,584	+				-1.9
3,695,584	+				-2.4
3,695,585	-				-0.4
3,695,585	-				-1.3
3,695,585	-				+0.2
3,695,585	-				-0.2
3,695,585	-				-1.3
3,695,585	-				-0.3
3,695,585	-				+0.1
3,695,638	+				-0.7