Strain Fitness in Dickeya dadantii 3937 around DDA3937_RS15385

Experiment: M9+glycerol

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	M9+glycerol
3,529,928	-		DDA3937_RS15380	0.70	+1.4
3,529,950	-		DDA3937_RS15380	0.71	+2.0
3,529,958	+		DDA3937_RS15380	0.72	+1.2
3,529,958	+		DDA3937_RS15380	0.72	-0.6
3,529,959	-		DDA3937_RS15380	0.72	-1.3
3,530,052	-		DDA3937_RS15380	0.77	-1.8
3,530,097	+		DDA3937_RS15380	0.80	-0.3
3,530,164	+		DDA3937_RS15380	0.84	-0.4
3,530,164	+		DDA3937_RS15380	0.84	+0.5
3,530,165	-		DDA3937_RS15380	0.84	-0.5
3,530,255	+		DDA3937_RS15380	0.89	-1.3
3,530,256	-		DDA3937_RS15380	0.89	-0.4
3,530,298	-				-0.9
3,530,327	+				-0.3
3,530,328	-				-0.2
3,530,344	+				-1.1
3,530,372	+				+1.1
3,530,437	+				+1.3
3,530,465	+				+1.5
3,530,515	-				+0.0
3,530,559	-				-0.2
3,530,571	+				+1.5
3,530,572	-				-0.4
3,530,572	-				-0.6
3,530,580	-				+0.4
3,530,660	+				+1.7
3,530,661	-				+0.2
3,530,703	-				+0.3
3,530,816	+				+1.2
3,530,816	+				-0.3
3,530,816	+				+0.3
3,530,816	+				+0.5
3,530,816	+				-0.9
3,530,817	-				-1.1
3,530,817	-				+0.0
3,530,817	-				-0.1
3,530,817	-				-0.7
3,530,817	-				-1.8
3,530,817	-				+0.1
3,530,817	-				-0.1
3,530,847	+				-0.1
3,530,847	+				+0.4
3,530,847	+				+0.1
3,530,847	+				-0.4
3,530,847	+				-0.3
3,530,848	-				-0.4
3,530,848	-				+1.6
3,530,848	-				-1.6
3,530,848	-				+0.4
3,530,848	-				+1.4
3,530,848	-				+0.0
3,530,848	-				-0.9
3,530,848	-				+0.4
3,530,848	-				+1.0
3,530,848	-				-1.0
3,531,010	+		DDA3937_RS15385	0.38	-0.4
3,531,010	+		DDA3937_RS15385	0.38	+0.0
3,531,010	+		DDA3937_RS15385	0.38	+0.0
3,531,010	+		DDA3937_RS15385	0.38	-1.8
3,531,010	+		DDA3937_RS15385	0.38	-2.6
3,531,010	+		DDA3937_RS15385	0.38	-0.7
3,531,010	+		DDA3937_RS15385	0.38	-0.5
3,531,011	-		DDA3937_RS15385	0.39	-1.8
3,531,011	-		DDA3937_RS15385	0.39	+0.4
3,531,011	-		DDA3937_RS15385	0.39	-0.3
3,531,011	-		DDA3937_RS15385	0.39	-1.7
3,531,102	-		DDA3937_RS15385	0.63	-0.5
3,531,147	+		DDA3937_RS15385	0.75	-0.6
3,531,147	+		DDA3937_RS15385	0.75	+1.6
3,531,147	+		DDA3937_RS15385	0.75	-0.6
3,531,147	+		DDA3937_RS15385	0.75	+0.6
3,531,148	-		DDA3937_RS15385	0.75	-0.9
3,531,148	-		DDA3937_RS15385	0.75	-1.3
3,531,148	-		DDA3937_RS15385	0.75	+0.0
3,531,148	-		DDA3937_RS15385	0.75	-0.6
3,531,148	-		DDA3937_RS15385	0.75	-1.3
3,531,149	+		DDA3937_RS15385	0.75	+0.1
3,531,149	+		DDA3937_RS15385	0.75	-0.2
3,531,149	+		DDA3937_RS15385	0.75	-2.0
3,531,149	+		DDA3937_RS15385	0.75	+0.3
3,531,149	+		DDA3937_RS15385	0.75	-1.0
3,531,149	+		DDA3937_RS15385	0.75	+1.0
3,531,150	-		DDA3937_RS15385	0.75	+0.1
3,531,150	-		DDA3937_RS15385	0.75	-0.1
3,531,159	+		DDA3937_RS15385	0.78	-0.7
3,531,159	+		DDA3937_RS15385	0.78	-0.4
3,531,160	-		DDA3937_RS15385	0.78	-1.6
3,531,160	-		DDA3937_RS15385	0.78	-0.8
3,531,160	-		DDA3937_RS15385	0.78	-0.0
3,531,213	+				+0.7
3,531,213	+				+1.3
3,531,214	-				-0.4
3,531,232	-				+0.0
3,531,245	+				-0.6
3,531,245	+				-0.4
3,531,245	+				-1.0
3,531,245	+				+0.8
3,531,245	+				+2.4
3,531,246	-				+0.0
3,531,246	-				+1.3
3,531,246	-				-0.6
3,531,246	-				-0.6
3,531,246	-				+1.0
3,531,248	+				-0.1
3,531,249	-				+0.4
3,531,258	+				-1.2
3,531,258	+				-0.2
3,531,258	+				-0.6
3,531,258	+				+0.0
3,531,258	+				-1.4
3,531,258	+				+0.2
3,531,258	+				-0.7
3,531,258	+				-3.6
3,531,259	-				+0.1
3,531,259	-				+0.1
3,531,259	-				-0.4
3,531,336	+				-1.2
3,531,336	+				-0.1
3,531,371	-				+0.3
3,531,458	-		DDA3937_RS15390	0.19	+0.4
3,531,458	-		DDA3937_RS15390	0.19	-0.2
3,531,623	-		DDA3937_RS15390	0.45	+0.9
3,531,759	+		DDA3937_RS15390	0.67	-0.9
3,531,760	-		DDA3937_RS15390	0.67	+0.1
3,531,771	+		DDA3937_RS15390	0.69	-0.3
3,531,771	+		DDA3937_RS15390	0.69	-0.0
3,531,771	+		DDA3937_RS15390	0.69	-0.6
3,531,771	+		DDA3937_RS15390	0.69	-1.1
3,531,771	+		DDA3937_RS15390	0.69	-0.1
3,531,771	+		DDA3937_RS15390	0.69	-2.2
3,531,771	+		DDA3937_RS15390	0.69	-0.9
3,531,771	+		DDA3937_RS15390	0.69	+0.7
3,531,771	+		DDA3937_RS15390	0.69	-1.0
3,531,772	-		DDA3937_RS15390	0.69	+1.4
3,531,772	-		DDA3937_RS15390	0.69	+2.0
3,531,772	-		DDA3937_RS15390	0.69	-1.7
3,531,772	-		DDA3937_RS15390	0.69	+0.7
3,531,772	-		DDA3937_RS15390	0.69	+0.7
3,531,772	-		DDA3937_RS15390	0.69	+0.1
3,531,772	-		DDA3937_RS15390	0.69	+0.6
3,531,772	-		DDA3937_RS15390	0.69	+1.3
3,531,772	-		DDA3937_RS15390	0.69	+0.7
3,531,772	-		DDA3937_RS15390	0.69	+0.6
3,531,772	-		DDA3937_RS15390	0.69	-0.2
3,531,772	-		DDA3937_RS15390	0.69	-1.3
3,531,772	-		DDA3937_RS15390	0.69	-0.8
3,531,800	+		DDA3937_RS15390	0.73	-0.7
3,531,800	+		DDA3937_RS15390	0.73	+0.0
3,531,915	+				+1.7
3,531,916	-				+0.3
3,531,973	+				-0.8
3,531,981	+				-2.8
3,532,000	+				-1.2
3,532,000	+				-0.2
3,532,000	+				-0.5
3,532,000	+				+0.0
3,532,000	+				+0.3
3,532,000	+				+0.7
3,532,000	+				-0.2
3,532,000	+				-1.5
3,532,001	-				-1.9
3,532,001	-				-0.7
3,532,001	-				-0.6
3,532,001	-				+0.2
3,532,001	-				+0.4
3,532,001	-				-1.7
3,532,001	-				-0.5
3,532,001	-				-0.1
3,532,001	-				+0.4
3,532,005	+				+1.6
3,532,005	+				+0.1
3,532,018	+				-1.1
3,532,018	+				-0.1
3,532,019	-				+0.0
3,532,056	+				+0.7
3,532,057	-				-0.9
3,532,090	-				+0.5
3,532,094	-				+1.2