Strain Fitness in Dickeya dadantii 3937 around DDA3937_RS15045

Experiment: M9+glycerol

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	M9+glycerol
3,451,335	+		DDA3937_RS15035	0.69	+0.5
3,451,335	+		DDA3937_RS15035	0.69	+1.0
3,451,335	+		DDA3937_RS15035	0.69	+0.6
3,451,338	+		DDA3937_RS15035	0.69	-1.0
3,451,338	+		DDA3937_RS15035	0.69	-0.2
3,451,338	+		DDA3937_RS15035	0.69	-1.8
3,451,338	+				-0.0
3,451,339	-		DDA3937_RS15035	0.69	-1.3
3,451,339	-		DDA3937_RS15035	0.69	-1.6
3,451,349	+		DDA3937_RS15035	0.71	-0.1
3,451,387	+		DDA3937_RS15035	0.76	-0.9
3,451,387	+		DDA3937_RS15035	0.76	+0.5
3,451,387	+		DDA3937_RS15035	0.76	+0.5
3,451,387	+				+1.0
3,451,387	+		DDA3937_RS15035	0.76	+1.4
3,451,388	-		DDA3937_RS15035	0.76	-0.4
3,451,388	-		DDA3937_RS15035	0.76	-0.7
3,451,388	-		DDA3937_RS15035	0.76	+0.7
3,451,389	+		DDA3937_RS15035	0.76	-0.5
3,451,389	+		DDA3937_RS15035	0.76	-1.0
3,451,389	+		DDA3937_RS15035	0.76	+1.0
3,451,389	+		DDA3937_RS15035	0.76	+1.5
3,451,389	+		DDA3937_RS15035	0.76	-1.0
3,451,389	+		DDA3937_RS15035	0.76	+0.2
3,451,389	+		DDA3937_RS15035	0.76	-2.0
3,451,389	+		DDA3937_RS15035	0.76	+0.1
3,451,389	+		DDA3937_RS15035	0.76	+0.1
3,451,389	+		DDA3937_RS15035	0.76	+1.0
3,451,389	+		DDA3937_RS15035	0.76	-0.2
3,451,389	+		DDA3937_RS15035	0.76	-0.4
3,451,390	-		DDA3937_RS15035	0.76	-0.3
3,451,390	-		DDA3937_RS15035	0.76	+0.8
3,451,390	-		DDA3937_RS15035	0.76	-1.9
3,451,390	-		DDA3937_RS15035	0.76	-0.5
3,451,390	-		DDA3937_RS15035	0.76	-1.4
3,451,390	-		DDA3937_RS15035	0.76	+1.0
3,451,390	-		DDA3937_RS15035	0.76	-0.2
3,451,586	+				-0.4
3,451,587	-				-0.4
3,451,653	-		DDA3937_RS15040	0.14	+2.4
3,451,653	-		DDA3937_RS15040	0.14	-1.0
3,451,674	-		DDA3937_RS15040	0.16	+1.6
3,451,686	-		DDA3937_RS15040	0.18	-0.5
3,451,686	-		DDA3937_RS15040	0.18	-1.4
3,451,919	+		DDA3937_RS15040	0.50	-0.5
3,451,934	+		DDA3937_RS15040	0.52	-1.0
3,451,935	-		DDA3937_RS15040	0.53	+0.2
3,452,051	+		DDA3937_RS15040	0.69	+1.0
3,452,051	+		DDA3937_RS15040	0.69	+0.8
3,452,060	+		DDA3937_RS15040	0.70	-0.3
3,452,061	-		DDA3937_RS15040	0.70	+0.7
3,452,103	-		DDA3937_RS15040	0.76	-0.4
3,452,263	+				+0.5
3,452,264	-				+0.0
3,452,277	+				-1.5
3,452,278	-				+1.0
3,452,364	+				-0.8
3,452,439	+		DDA3937_RS15045	0.17	+2.2
3,452,440	-		DDA3937_RS15045	0.17	-1.2
3,452,514	+		DDA3937_RS15045	0.26	+0.8
3,452,514	+		DDA3937_RS15045	0.26	-1.4
3,452,515	-		DDA3937_RS15045	0.26	-0.2
3,452,515	-		DDA3937_RS15045	0.26	-0.2
3,452,515	-		DDA3937_RS15045	0.26	-2.0
3,452,515	-		DDA3937_RS15045	0.26	+1.6
3,452,582	+		DDA3937_RS15045	0.34	-0.2
3,452,583	-		DDA3937_RS15045	0.34	-0.7
3,452,612	+		DDA3937_RS15045	0.37	+0.6
3,452,612	+		DDA3937_RS15045	0.37	+0.1
3,452,612	+		DDA3937_RS15045	0.37	-0.4
3,452,613	-		DDA3937_RS15045	0.37	-0.2
3,452,613	-		DDA3937_RS15045	0.37	+0.4
3,452,631	+		DDA3937_RS15045	0.39	-0.5
3,452,631	+		DDA3937_RS15045	0.39	-1.1
3,452,631	+		DDA3937_RS15045	0.39	+1.3
3,452,632	-		DDA3937_RS15045	0.40	-1.9
3,452,632	-		DDA3937_RS15045	0.40	-1.1
3,452,632	-		DDA3937_RS15045	0.40	+0.8
3,452,632	-		DDA3937_RS15045	0.40	+0.8
3,452,633	+		DDA3937_RS15045	0.40	-1.6
3,452,704	-		DDA3937_RS15045	0.48	-0.9
3,452,784	+		DDA3937_RS15045	0.57	-0.4
3,452,785	-		DDA3937_RS15045	0.57	-0.6
3,452,835	+		DDA3937_RS15045	0.63	+1.0
3,452,835	+		DDA3937_RS15045	0.63	-1.7
3,452,835	+		DDA3937_RS15045	0.63	-1.7
3,452,836	-		DDA3937_RS15045	0.63	+0.3
3,452,836	-		DDA3937_RS15045	0.63	+0.5
3,452,836	-		DDA3937_RS15045	0.63	+1.1
3,453,026	+		DDA3937_RS15045	0.85	+2.0
3,453,026	+		DDA3937_RS15045	0.85	-0.3
3,453,027	-		DDA3937_RS15045	0.86	-0.0
3,453,045	+		DDA3937_RS15045	0.88	-0.9
3,453,112	+				+0.1
3,453,113	-				+1.7
3,453,113	-				+1.6
3,453,181	-				-2.6
3,453,184	+				+0.4
3,453,190	+				-1.0
3,453,190	+				+2.1
3,453,191	-				-0.2
3,453,191	-				-0.4
3,453,191	-				+0.1
3,453,191	-				+0.1
3,453,191	-				+1.5
3,453,194	+				-0.0
3,453,194	+				+1.4
3,453,195	-				-0.4
3,453,195	-				-0.0
3,453,206	+				-1.6
3,453,206	+				-0.4
3,453,207	-				-0.7
3,453,275	+				-0.0
3,453,502	+				+0.4
3,453,587	+		DDA3937_RS15050	0.41	+0.6
3,453,587	+		DDA3937_RS15050	0.41	-0.6
3,453,587	+		DDA3937_RS15050	0.41	-0.7
3,453,587	+		DDA3937_RS15050	0.41	+0.3
3,453,588	-		DDA3937_RS15050	0.41	-0.1
3,453,588	-		DDA3937_RS15050	0.41	+0.7
3,453,588	-		DDA3937_RS15050	0.41	-0.2
3,453,588	-		DDA3937_RS15050	0.41	-0.0
3,453,590	+		DDA3937_RS15050	0.41	+0.4
3,453,590	+		DDA3937_RS15050	0.41	+0.1
3,453,590	+		DDA3937_RS15050	0.41	-0.0
3,453,590	+		DDA3937_RS15050	0.41	-0.0
3,453,590	+		DDA3937_RS15050	0.41	+0.1
3,453,591	-		DDA3937_RS15050	0.42	-0.0
3,453,618	+		DDA3937_RS15050	0.46	-1.7
3,453,618	+		DDA3937_RS15050	0.46	-0.0
3,453,619	-		DDA3937_RS15050	0.47	-0.7
3,453,619	-		DDA3937_RS15050	0.47	+0.0
3,453,723	+		DDA3937_RS15050	0.66	+0.2
3,453,724	-		DDA3937_RS15050	0.66	-0.9
3,453,724	-		DDA3937_RS15050	0.66	+0.5
3,454,088	+		DDA3937_RS15055	0.13	-0.1
3,454,089	-		DDA3937_RS15055	0.13	+2.0