Strain Fitness in Dickeya dadantii 3937 around DDA3937_RS14780

Experiment: M9+glycerol

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	M9+glycerol
3,391,477	+		DDA3937_RS14770	0.26	+0.0
3,391,477	+		DDA3937_RS14770	0.26	-0.2
3,391,477	+		DDA3937_RS14770	0.26	+0.4
3,391,478	-		DDA3937_RS14770	0.26	+0.9
3,391,478	-		DDA3937_RS14770	0.26	-0.7
3,391,490	+		DDA3937_RS14770	0.28	+0.9
3,391,572	+		DDA3937_RS14770	0.39	-1.2
3,391,572	+		DDA3937_RS14770	0.39	-0.4
3,391,573	-		DDA3937_RS14770	0.39	-2.7
3,391,573	-		DDA3937_RS14770	0.39	+1.2
3,391,593	+		DDA3937_RS14770	0.42	+0.2
3,391,605	+		DDA3937_RS14770	0.43	-3.3
3,391,605	+		DDA3937_RS14770	0.43	-0.7
3,391,605	+		DDA3937_RS14770	0.43	+0.7
3,391,605	+		DDA3937_RS14770	0.43	-0.2
3,391,605	+		DDA3937_RS14770	0.43	-0.7
3,391,605	+		DDA3937_RS14770	0.43	-1.9
3,391,645	+		DDA3937_RS14770	0.49	-1.4
3,391,712	+		DDA3937_RS14770	0.58	-0.1
3,391,746	-		DDA3937_RS14770	0.62	+0.5
3,391,773	+		DDA3937_RS14770	0.66	+0.0
3,391,773	+		DDA3937_RS14770	0.66	+1.5
3,391,773	+		DDA3937_RS14770	0.66	-0.7
3,391,774	-		DDA3937_RS14770	0.66	-1.0
3,391,780	+		DDA3937_RS14770	0.67	-0.6
3,391,792	+		DDA3937_RS14770	0.69	-1.4
3,391,872	+		DDA3937_RS14770	0.79	-1.0
3,391,872	+		DDA3937_RS14770	0.79	+1.3
3,391,872	+		DDA3937_RS14770	0.79	-0.2
3,391,872	+		DDA3937_RS14770	0.79	-0.9
3,391,873	-		DDA3937_RS14770	0.79	-1.9
3,391,873	-		DDA3937_RS14770	0.79	-1.0
3,391,895	+		DDA3937_RS14770	0.82	+1.3
3,392,000	+				+0.0
3,392,001	-				-2.4
3,392,001	-				-1.3
3,392,001	-				-0.7
3,392,052	+				-1.4
3,392,053	-				-1.1
3,392,111	+		DDA3937_RS14775	0.24	-0.3
3,392,112	-				-0.7
3,392,153	-		DDA3937_RS14775	0.35	-1.8
3,392,516	+		DDA3937_RS14780	0.21	-0.8
3,392,664	+		DDA3937_RS14780	0.49	-0.9
3,392,664	+		DDA3937_RS14780	0.49	-0.4
3,392,664	+		DDA3937_RS14780	0.49	+0.4
3,392,664	+		DDA3937_RS14780	0.49	-0.2
3,392,664	+		DDA3937_RS14780	0.49	-1.1
3,392,746	+		DDA3937_RS14780	0.64	-2.1
3,392,748	+		DDA3937_RS14780	0.64	+0.7
3,392,748	+		DDA3937_RS14780	0.64	-0.5
3,392,748	+				-1.4
3,392,748	+		DDA3937_RS14780	0.64	-0.7
3,392,748	+		DDA3937_RS14780	0.64	-1.1
3,392,749	-		DDA3937_RS14780	0.64	-2.1
3,392,749	-		DDA3937_RS14780	0.64	-0.7
3,392,749	-		DDA3937_RS14780	0.64	-3.0
3,392,749	-		DDA3937_RS14780	0.64	-1.7
3,392,753	-		DDA3937_RS14780	0.65	-0.6
3,392,761	+		DDA3937_RS14780	0.66	-1.7
3,392,762	-		DDA3937_RS14780	0.67	-2.3
3,392,762	-		DDA3937_RS14780	0.67	-0.3
3,392,762	-		DDA3937_RS14780	0.67	-0.7
3,392,845	+		DDA3937_RS14780	0.82	-0.9
3,392,846	-		DDA3937_RS14780	0.82	-1.3
3,392,846	-		DDA3937_RS14780	0.82	-0.1
3,392,923	+				-0.7
3,392,923	+				-0.7
3,392,924	-				-0.6
3,392,924	-				+1.2
3,392,924	-				-0.4
3,392,924	-				-0.7
3,392,958	+				-0.2
3,393,044	+		DDA3937_RS14785	0.22	-0.1
3,393,093	-		DDA3937_RS14785	0.32	-1.2
3,393,129	+		DDA3937_RS14785	0.40	-0.5
3,393,129	+		DDA3937_RS14785	0.40	-1.0
3,393,129	+		DDA3937_RS14785	0.40	-0.9
3,393,131	+		DDA3937_RS14785	0.40	-1.2
3,393,131	+		DDA3937_RS14785	0.40	+0.3
3,393,132	-		DDA3937_RS14785	0.41	-1.2
3,393,132	-		DDA3937_RS14785	0.41	-1.9
3,393,132	-		DDA3937_RS14785	0.41	+0.0
3,393,132	-		DDA3937_RS14785	0.41	-1.4
3,393,150	+		DDA3937_RS14785	0.45	-1.6
3,393,236	+		DDA3937_RS14785	0.63	-1.7
3,393,236	+		DDA3937_RS14785	0.63	-1.4
3,393,236	+		DDA3937_RS14785	0.63	-0.3
3,393,236	+		DDA3937_RS14785	0.63	-1.7
3,393,236	+		DDA3937_RS14785	0.63	-1.0
3,393,236	+		DDA3937_RS14785	0.63	-1.1
3,393,236	+		DDA3937_RS14785	0.63	+0.3
3,393,236	+		DDA3937_RS14785	0.63	+2.4
3,393,236	+		DDA3937_RS14785	0.63	-0.7
3,393,236	+		DDA3937_RS14785	0.63	+1.1
3,393,237	-		DDA3937_RS14785	0.63	-0.6
3,393,237	-		DDA3937_RS14785	0.63	-1.3
3,393,237	-		DDA3937_RS14785	0.63	+0.9
3,393,237	-		DDA3937_RS14785	0.63	-1.3
3,393,240	+		DDA3937_RS14785	0.64	+0.3
3,393,241	-		DDA3937_RS14785	0.64	-0.2
3,393,241	-		DDA3937_RS14785	0.64	-0.8
3,393,241	-		DDA3937_RS14785	0.64	-2.6
3,393,265	+		DDA3937_RS14785	0.69	-0.6
3,393,265	+		DDA3937_RS14785	0.69	-0.1
3,393,265	+		DDA3937_RS14785	0.69	-0.4
3,393,265	+		DDA3937_RS14785	0.69	-0.1
3,393,265	+		DDA3937_RS14785	0.69	-0.5
3,393,265	+		DDA3937_RS14785	0.69	-1.4
3,393,266	-		DDA3937_RS14785	0.70	+0.1
3,393,266	-		DDA3937_RS14785	0.70	-0.8
3,393,422	+				-0.9
3,393,427	+				-2.6
3,393,427	+				-1.3
3,393,428	-				+0.6
3,393,428	-				+0.7
3,393,428	-				+1.7
3,393,440	+				-1.3
3,393,440	+				-0.7
3,393,440	+				-0.7
3,393,440	+				-0.7
3,393,440	+				+0.3
3,393,440	+				-0.5
3,393,441	-				-0.1
3,393,441	-				-0.5
3,393,441	-				-0.6
3,393,441	-				+0.1
3,393,441	-				+1.1
3,393,444	+				-2.1
3,393,444	+				+0.1
3,393,444	+				-1.0
3,393,444	+				+0.0
3,393,444	+				-1.1
3,393,444	+				-0.5
3,393,444	+				+0.0
3,393,444	+				-0.5
3,393,445	-				-0.8
3,393,445	-				-0.8
3,393,445	-				-1.0
3,393,445	-				-0.2
3,393,445	-				-0.1
3,393,445	-				-1.9
3,393,445	-				-0.3
3,393,445	-				-2.0
3,393,445	-				-0.7
3,393,445	-				+0.7
3,393,445	-				-0.7
3,393,445	-				-2.2
3,393,445	-				-1.1
3,393,445	-				-0.7
3,393,505	+				-1.4
3,393,505	+				-1.9
3,393,505	+				-0.2
3,393,505	+				+2.0
3,393,506	-				-3.0
3,393,506	-				-1.1
3,393,752	+		DDA3937_RS14790	0.26	-0.7
3,393,752	+		DDA3937_RS14790	0.26	+0.3
3,393,753	-				+0.9
3,393,817	-		DDA3937_RS14790	0.31	-1.1
3,393,853	-		DDA3937_RS14790	0.34	-0.2
3,393,868	-		DDA3937_RS14790	0.35	-1.4
3,393,868	-		DDA3937_RS14790	0.35	-0.8