Strain Fitness in Dickeya dadantii 3937 around DDA3937_RS23090

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
1,660,434	-		DDA3937_RS23085	0.35	-0.2
1,660,491	-		DDA3937_RS23085	0.67	+1.1
1,660,497	-		DDA3937_RS23085	0.70	-0.1
1,660,497	-		DDA3937_RS23085	0.70	-0.4
1,660,498	+		DDA3937_RS23085	0.71	-1.4
1,660,498	+		DDA3937_RS23085	0.71	-1.2
1,660,499	-		DDA3937_RS23085	0.71	+1.5
1,660,521	-		DDA3937_RS23085	0.83	+0.7
1,660,530	+		DDA3937_RS23085	0.88	+2.4
1,660,542	-				-1.4
1,660,575	-				-0.1
1,660,581	+				+0.7
1,660,581	+				+0.9
1,660,582	-				-2.0
1,660,621	+				-0.1
1,660,622	-				-0.9
1,660,735	+				-0.5
1,660,923	+				+0.2
1,660,926	-				-0.6
1,661,021	+				+0.2
1,661,060	+				-0.1
1,661,142	+				-1.0
1,661,231	-				-1.2
1,661,305	+				-0.5
1,661,309	+				-0.0
1,661,310	-				-1.8
1,661,318	-				+0.2
1,661,318	-				+0.1
1,661,340	-				-1.0
1,661,340	-				-0.1
1,661,491	+		DDA3937_RS23090	0.24	-0.2
1,661,530	-		DDA3937_RS23090	0.34	-1.0
1,661,563	+		DDA3937_RS23090	0.42	-0.1
1,661,564	-		DDA3937_RS23090	0.42	-0.7
1,661,637	+		DDA3937_RS23090	0.60	-0.6
1,661,637	+		DDA3937_RS23090	0.60	-0.8
1,661,638	-		DDA3937_RS23090	0.60	+0.1
1,661,638	-		DDA3937_RS23090	0.60	-0.7
1,661,701	-		DDA3937_RS23090	0.76	+1.0
1,661,734	+		DDA3937_RS23090	0.84	-0.6
1,661,734	+		DDA3937_RS23090	0.84	+0.1
1,661,735	-		DDA3937_RS23090	0.84	-0.2
1,661,735	-		DDA3937_RS23090	0.84	-0.4
1,661,735	-		DDA3937_RS23090	0.84	-0.8
1,661,736	+		DDA3937_RS23090	0.84	-0.5
1,661,736	+		DDA3937_RS23090	0.84	-0.4
1,661,736	+		DDA3937_RS23090	0.84	+0.8
1,661,737	-		DDA3937_RS23090	0.85	-0.5
1,661,737	-		DDA3937_RS23090	0.85	-0.6
1,661,879	+				-1.0
1,661,879	+				-0.2
1,661,880	-				-0.3
1,661,880	-				-0.3
1,661,883	+				-1.0
1,661,883	+				-0.3
1,661,884	-				-0.2
1,661,909	+				-1.0
1,661,910	-				-0.6
1,661,910	-				-1.3
1,661,924	+				-0.4
1,661,924	+				+0.1
1,661,968	-				+0.5
1,661,968	-				+0.1
1,662,006	-		DDA3937_RS07370	0.43	+0.4
1,662,006	-		DDA3937_RS07370	0.43	+1.1
1,662,068	+				-0.2
1,662,071	+				-0.6
1,662,101	+				-0.2
1,662,102	-				-1.8
1,662,142	-				-0.6
1,662,142	-				+0.4
1,662,142	-				-0.1
1,662,142	-				-0.0
1,662,142	-				-0.6
1,662,184	+				+0.2
1,662,184	+				+0.9
1,662,185	-				+0.3
1,662,185	-				-0.4
1,662,185	-				-0.8
1,662,185	-				-2.9
1,662,185	-				+1.0
1,662,203	-				-0.8
1,662,435	-				-0.1
1,662,533	+				-0.2
1,662,635	-		DDA3937_RS07375	0.12	-0.8
1,662,665	+		DDA3937_RS07375	0.13	+0.2
1,662,709	+		DDA3937_RS07375	0.15	-0.6
1,662,709	+		DDA3937_RS07375	0.15	+0.2
1,662,709	+		DDA3937_RS07375	0.15	-0.2
1,662,709	+		DDA3937_RS07375	0.15	-0.2
1,662,709	+		DDA3937_RS07375	0.15	-0.9
1,662,709	+		DDA3937_RS07375	0.15	-0.4
1,662,710	-		DDA3937_RS07375	0.15	-0.1
1,662,710	-		DDA3937_RS07375	0.15	-0.7
1,662,710	-		DDA3937_RS07375	0.15	-0.8
1,662,789	-				+1.4