Strain Fitness in Dickeya dadantii 3937 around DDA3937_RS22175

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
2,034,240	+		DDA3937_RS09030	0.68	+0.6
2,034,241	-		DDA3937_RS09030	0.68	-1.2
2,034,260	-		DDA3937_RS09030	0.73	-1.4
2,034,260	-		DDA3937_RS09030	0.73	+0.9
2,034,268	+		DDA3937_RS09030	0.74	+1.5
2,034,281	+		DDA3937_RS09030	0.77	-2.1
2,034,290	-		DDA3937_RS09030	0.79	-0.3
2,034,314	-		DDA3937_RS09030	0.85	+0.1
2,034,320	+		DDA3937_RS09030	0.86	-0.9
2,034,322	+		DDA3937_RS09030	0.87	-0.2
2,034,322	+		DDA3937_RS09030	0.87	-0.6
2,034,322	+		DDA3937_RS09030	0.87	-1.6
2,034,322	+		DDA3937_RS09030	0.87	-1.0
2,034,322	+		DDA3937_RS09030	0.87	-0.6
2,034,322	+		DDA3937_RS09030	0.87	-0.1
2,034,323	-		DDA3937_RS09030	0.87	-0.9
2,034,323	-		DDA3937_RS09030	0.87	-0.3
2,034,323	-		DDA3937_RS09030	0.87	-0.9
2,034,323	-		DDA3937_RS09030	0.87	-0.6
2,034,326	+		DDA3937_RS09030	0.88	-0.3
2,034,326	+		DDA3937_RS09030	0.88	+1.0
2,034,326	+		DDA3937_RS09030	0.88	+1.1
2,034,326	+		DDA3937_RS09030	0.88	+0.7
2,034,327	-		DDA3937_RS09030	0.88	-1.0
2,034,327	-		DDA3937_RS09030	0.88	+0.0
2,034,327	-		DDA3937_RS09030	0.88	-2.1
2,034,327	-		DDA3937_RS09030	0.88	+0.2
2,034,353	-				-0.6
2,034,378	+				-0.1
2,034,391	-				+0.6
2,034,429	+				-0.1
2,034,430	-				+0.6
2,034,438	+				-0.9
2,034,455	+				+0.0
2,034,455	+				+2.0
2,034,455	+				+0.7
2,034,455	+				-1.2
2,034,455	+				-0.9
2,034,456	-				+0.1
2,034,456	-				+0.4
2,034,456	-				-0.3
2,034,456	-				-0.9
2,034,456	-				-1.3
2,034,456	-				+0.1
2,034,456	-				+0.9
2,034,457	+				-0.9
2,034,457	+				+0.4
2,034,457	+				-0.4
2,034,457	+				-0.1
2,034,457	+				-1.0
2,034,458	-				-0.1
2,034,475	-				+0.6
2,034,498	+				+0.0
2,034,498	+				+0.2
2,034,498	+				-0.6
2,034,503	-				+0.1
2,034,556	+				-0.7
2,034,564	+				+0.2
2,034,565	-				+0.2
2,034,565	-				-1.9
2,034,565	-				+0.5
2,034,565	-				+0.8
2,034,620	+				-0.3
2,034,621	-				+1.0
2,034,621	-				-1.3
2,034,671	+				-0.4
2,034,681	+				-2.5
2,034,682	-				+1.7
2,034,682	-				+0.3
2,034,685	+				+1.4
2,034,685	+				-0.3
2,034,686	-				+0.4
2,034,687	+				-0.8
2,034,687	+				-0.6
2,034,687	+				-0.5
2,034,687	+				-1.5
2,034,687	+				-0.9
2,034,688	-				-0.1
2,034,692	+				+1.1
2,034,771	-		DDA3937_RS23135	0.59	-0.3
2,034,850	+				-1.3
2,034,868	+				+0.4
2,034,868	+				-0.5
2,034,868	+				+0.4
2,034,868	+				+0.1
2,034,869	-				-1.4
2,034,869	-				-0.9
2,034,869	-				-0.4
2,034,871	+				-0.0
2,034,871	+				-1.1
2,034,872	-				-0.1
2,034,872	-				-1.3
2,034,895	-				-1.6
2,034,917	-				+0.6
2,034,925	+				-0.5
2,034,926	-				+0.7
2,034,926	-				-0.8
2,034,927	+				-1.1
2,034,927	+				+0.0
2,034,927	+				-0.2
2,035,193	+				+0.5
2,035,193	+				-1.4
2,035,194	-				-0.2
2,035,220	-				-0.1
2,035,220	-				+0.9
2,035,220	-				-0.6
2,035,240	-				+1.0
2,035,240	-				+0.3
2,035,556	-		DDA3937_RS22175	0.29	+2.3
2,035,606	+		DDA3937_RS22175	0.33	-1.5
2,035,687	-		DDA3937_RS22175	0.41	-0.9
2,035,687	-		DDA3937_RS22175	0.41	+0.1
2,035,687	-		DDA3937_RS22175	0.41	-2.5
2,036,384	+				+0.5
2,036,384	+				+0.1
2,036,384	+				-0.4
2,036,384	+				-0.4
2,036,387	+				-1.3
2,036,403	+				-0.4
2,036,483	-				+0.4
2,036,508	+				+0.7
2,036,543	+				-0.5
2,036,543	+				-0.9
2,036,543	+				-2.4
2,036,543	+				+0.9
2,036,543	+				+0.1
2,036,544	-				-1.7
2,036,544	-				+0.2
2,036,544	-				-1.6
2,036,544	-				+0.5
2,036,544	-				+1.0
2,036,545	+				-0.3
2,036,545	+				-0.1
2,036,545	+				+0.1
2,036,545	+				-0.5
2,036,545	+				-2.5
2,036,546	-				+1.0
2,036,547	+				-0.1
2,036,547	+				+0.3
2,036,547	+				-0.3
2,036,547	+				+1.0
2,036,547	+				-0.7
2,036,547	+				-0.7
2,036,548	-				+0.4
2,036,548	-				+0.7
2,036,548	-				-0.5
2,036,548	-				-0.3
2,036,556	-				+0.2
2,036,570	-				+1.2
2,036,570	-				-0.5
2,036,600	-				-0.5
2,036,600	-				-0.2
2,036,617	-				-1.1
2,036,617	-				-0.9
2,036,629	-				-0.5
2,036,631	+				+0.0
2,036,652	+				-0.9
2,036,652	+				+0.2
2,036,653	-				-0.3
2,036,653	-				-0.6
2,036,660	-				+0.7
2,036,690	+				-1.1
2,036,690	+				-0.1
2,036,691	-				-0.7
2,036,692	+				-0.5
2,036,692	+				+0.7
2,036,692	+				+0.4
2,036,692	+				+1.1
2,036,692	+				-0.4
2,036,692	+				-0.6
2,036,692	+				-0.5
2,036,693	-				+0.7
2,036,693	-				+1.9
2,036,693	-				-0.4
2,036,693	-				+0.2
2,036,710	+				-2.0
2,036,711	-				-0.3
2,036,725	+				+2.0
2,036,763	+		DDA3937_RS09045	0.14	+0.5
2,036,777	+		DDA3937_RS09045	0.17	+0.1
2,036,777	+		DDA3937_RS09045	0.17	-0.4
2,036,777	+		DDA3937_RS09045	0.17	-0.9
2,036,831	+		DDA3937_RS09045	0.27	-0.2
2,036,831	+		DDA3937_RS09045	0.27	+0.1
2,036,831	+		DDA3937_RS09045	0.27	-0.6
2,036,861	+		DDA3937_RS09045	0.33	+1.9
2,036,862	-		DDA3937_RS09045	0.33	+0.3
2,036,862	-		DDA3937_RS09045	0.33	+0.4
2,036,862	-		DDA3937_RS09045	0.33	+0.1
2,036,862	-		DDA3937_RS09045	0.33	+0.1
2,036,862	-		DDA3937_RS09045	0.33	-0.3
2,036,862	-		DDA3937_RS09045	0.33	-0.8
2,036,891	+		DDA3937_RS09045	0.39	-0.1
2,036,892	-		DDA3937_RS09045	0.39	+0.1
2,036,901	+		DDA3937_RS09045	0.41	-0.1
2,036,902	-		DDA3937_RS09045	0.41	-0.2
2,036,902	-		DDA3937_RS09045	0.41	+0.6
2,036,902	-		DDA3937_RS09045	0.41	-0.3
2,036,902	-		DDA3937_RS09045	0.41	-0.7
2,036,935	+		DDA3937_RS09045	0.47	-1.1
2,036,935	+		DDA3937_RS09045	0.47	-0.4
2,036,960	+		DDA3937_RS09045	0.52	-0.7
2,036,960	+		DDA3937_RS09045	0.52	+0.5
2,036,961	-				-0.9
2,036,961	-		DDA3937_RS09045	0.52	-0.8
2,036,964	+		DDA3937_RS09045	0.53	-1.8
2,036,965	-		DDA3937_RS09045	0.53	-0.6
2,036,986	-		DDA3937_RS09045	0.57	+0.9
2,037,152	+		DDA3937_RS09045	0.89	+1.0
2,037,152	+		DDA3937_RS09045	0.89	+0.1
2,037,152	+		DDA3937_RS09045	0.89	+0.2
2,037,152	+		DDA3937_RS09045	0.89	-0.2
2,037,152	+		DDA3937_RS09045	0.89	-1.3
2,037,152	+		DDA3937_RS09045	0.89	-1.3
2,037,152	+		DDA3937_RS09045	0.89	-0.6
2,037,152	+		DDA3937_RS09045	0.89	-0.0
2,037,152	+		DDA3937_RS09045	0.89	-2.5
2,037,152	+		DDA3937_RS09045	0.89	-0.0
2,037,153	-		DDA3937_RS09045	0.89	+0.7
2,037,153	-		DDA3937_RS09045	0.89	+0.6
2,037,153	-		DDA3937_RS09045	0.89	-1.3
2,037,153	-		DDA3937_RS09045	0.89	+0.4
2,037,153	-		DDA3937_RS09045	0.89	-0.0
2,037,153	-		DDA3937_RS09045	0.89	-0.1
2,037,189	-				+0.3
2,037,206	-				-0.0
2,037,286	-				-1.9
2,037,286	-				-0.1
2,037,286	-				-0.7
2,037,286	-				+1.3