Strain Fitness in Dickeya dadantii 3937 around DDA3937_RS19440

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
4,418,226	-				-0.1
4,418,226	-				-0.4
4,418,226	-				-1.4
4,418,226	-				-0.1
4,418,226	-				-0.1
4,418,234	+				+0.0
4,418,241	+				-0.1
4,418,241	+				+0.1
4,418,248	+				+0.2
4,418,248	+				+0.5
4,418,248	+				-1.0
4,418,249	-				-0.3
4,418,249	-				+0.1
4,418,249	-				-1.9
4,418,439	+		DDA3937_RS19435	0.15	-0.2
4,418,439	+		DDA3937_RS19435	0.15	-0.7
4,418,439	+				+0.2
4,418,439	+		DDA3937_RS19435	0.15	-1.1
4,418,440	-		DDA3937_RS19435	0.15	-1.4
4,418,440	-		DDA3937_RS19435	0.15	-1.6
4,418,440	-				+0.6
4,418,449	-		DDA3937_RS19435	0.16	+0.8
4,418,450	+		DDA3937_RS19435	0.16	+0.9
4,418,553	-		DDA3937_RS19435	0.28	+0.2
4,418,553	-		DDA3937_RS19435	0.28	+0.4
4,418,553	-				+1.2
4,418,566	-		DDA3937_RS19435	0.29	-1.4
4,418,610	+		DDA3937_RS19435	0.34	-0.8
4,418,610	+		DDA3937_RS19435	0.34	-1.1
4,418,611	-		DDA3937_RS19435	0.35	-0.5
4,418,611	-		DDA3937_RS19435	0.35	-1.1
4,418,629	-		DDA3937_RS19435	0.37	-1.9
4,418,695	-		DDA3937_RS19435	0.44	+0.6
4,418,695	-		DDA3937_RS19435	0.44	-1.6
4,418,877	+		DDA3937_RS19435	0.65	-1.8
4,418,877	+		DDA3937_RS19435	0.65	-0.8
4,418,878	-				-0.4
4,418,878	-		DDA3937_RS19435	0.65	-1.8
4,418,878	-		DDA3937_RS19435	0.65	+2.2
4,419,039	+		DDA3937_RS19435	0.84	-2.7
4,419,040	-		DDA3937_RS19435	0.84	+0.7
4,419,155	-				+0.5
4,419,157	+				-0.2
4,419,157	+				-0.5
4,419,157	+				-1.8
4,419,158	-				-0.1
4,419,158	-				-0.8
4,419,158	-				+0.2
4,419,171	-				+0.4
4,419,171	-				-0.5
4,419,177	+				+0.2
4,419,177	+				-1.0
4,419,178	-				-0.9
4,419,298	+		DDA3937_RS19440	0.18	+1.2
4,419,451	+		DDA3937_RS19440	0.55	-2.1
4,419,451	+		DDA3937_RS19440	0.55	+0.6
4,419,470	+		DDA3937_RS19440	0.60	-0.1
4,419,471	-		DDA3937_RS19440	0.60	-1.2
4,419,632	+				-0.4
4,419,632	+				+0.3
4,419,632	+				-0.5
4,419,633	-				-0.3
4,419,633	-				-0.6
4,419,675	+				-0.6
4,419,675	+				-0.2
4,419,676	-				-0.1
4,419,705	+				+0.5
4,419,706	-				-0.1
4,419,706	-				+0.6
4,419,753	+				-1.8
4,419,878	+				-0.9
4,419,878	+				+1.2
4,419,948	-				-1.1