Strain Fitness in Dickeya dadantii 3937 around DDA3937_RS18195

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
4,152,665	+		DDA3937_RS18185	0.51	+0.9
4,152,666	-		DDA3937_RS18185	0.52	-1.9
4,152,688	+		DDA3937_RS18185	0.54	-0.5
4,152,689	-		DDA3937_RS18185	0.54	-0.5
4,152,692	+		DDA3937_RS18185	0.55	-1.2
4,152,692	+		DDA3937_RS18185	0.55	+0.1
4,152,692	+		DDA3937_RS18185	0.55	+1.9
4,152,693	-		DDA3937_RS18185	0.55	+0.5
4,152,693	-		DDA3937_RS18185	0.55	+0.1
4,152,693	-		DDA3937_RS18185	0.55	-0.1
4,152,693	-		DDA3937_RS18185	0.55	+0.0
4,152,713	-		DDA3937_RS18185	0.57	+0.9
4,152,714	+		DDA3937_RS18185	0.57	-0.8
4,152,714	+		DDA3937_RS18185	0.57	+1.1
4,152,715	-		DDA3937_RS18185	0.57	-1.1
4,152,715	-		DDA3937_RS18185	0.57	+0.3
4,152,715	-		DDA3937_RS18185	0.57	-0.7
4,152,715	-		DDA3937_RS18185	0.57	+0.1
4,152,737	+		DDA3937_RS18185	0.60	-0.9
4,152,738	-				+0.5
4,152,848	+		DDA3937_RS18185	0.73	-1.1
4,152,848	+		DDA3937_RS18185	0.73	-0.3
4,152,848	+		DDA3937_RS18185	0.73	-0.8
4,152,850	+		DDA3937_RS18185	0.73	-0.6
4,152,850	+		DDA3937_RS18185	0.73	+0.3
4,152,851	-		DDA3937_RS18185	0.73	-1.1
4,152,901	+		DDA3937_RS18185	0.79	+0.7
4,152,902	-		DDA3937_RS18185	0.79	-0.9
4,152,902	-		DDA3937_RS18185	0.79	-0.6
4,152,902	-		DDA3937_RS18185	0.79	+0.4
4,152,902	-		DDA3937_RS18185	0.79	-0.2
4,152,902	-		DDA3937_RS18185	0.79	-0.4
4,152,937	-		DDA3937_RS18185	0.83	+0.2
4,152,954	+		DDA3937_RS18185	0.85	-1.3
4,152,954	+		DDA3937_RS18185	0.85	+0.4
4,153,004	-				+0.1
4,153,016	+				-1.0
4,153,031	+				-0.5
4,153,085	-				-2.3
4,153,095	+				-0.5
4,153,291	-		DDA3937_RS18190	0.36	-0.6
4,153,294	-		DDA3937_RS18190	0.37	-0.0
4,153,477	-		DDA3937_RS18190	0.69	+0.1
4,153,477	-		DDA3937_RS18190	0.69	-0.8
4,153,477	-		DDA3937_RS18190	0.69	-0.3
4,153,480	+		DDA3937_RS18190	0.70	-1.0
4,153,609	-				+1.7
4,153,627	+				+0.0
4,153,797	-		DDA3937_RS18195	0.26	-0.9
4,153,821	+		DDA3937_RS18195	0.30	-1.7
4,153,850	+		DDA3937_RS18195	0.35	-1.1
4,153,932	+		DDA3937_RS18195	0.50	-0.6
4,153,979	+		DDA3937_RS18195	0.58	-1.2
4,154,220	+				-0.6
4,154,226	+				-2.0
4,154,281	+				-0.9
4,154,343	-		DDA3937_RS18200	0.23	+0.7
4,154,343	-		DDA3937_RS18200	0.23	-0.7
4,154,433	+		DDA3937_RS18200	0.47	-0.3
4,154,433	+		DDA3937_RS18200	0.47	+2.5
4,154,434	-		DDA3937_RS18200	0.48	-0.7
4,154,435	+		DDA3937_RS18200	0.48	-1.4
4,154,437	+		DDA3937_RS18200	0.49	+0.4
4,154,438	-		DDA3937_RS18200	0.49	-0.3
4,154,438	-		DDA3937_RS18200	0.49	-0.6
4,154,498	+		DDA3937_RS18200	0.65	-0.5
4,154,499	-		DDA3937_RS18200	0.65	-0.2
4,154,531	+		DDA3937_RS18200	0.74	+0.0
4,154,581	+		DDA3937_RS18200	0.88	-1.0
4,154,590	-				+1.1
4,154,594	-				-0.3
4,154,609	-				-1.7
4,154,627	+				+0.4
4,154,628	-				-0.5
4,154,635	+				-0.9
4,154,658	+				-0.3
4,154,662	+				+1.3
4,154,662	+				-0.5
4,154,663	-				-0.4
4,154,672	-				+0.5
4,154,708	+				-0.5
4,154,732	+				+0.0
4,154,733	-				-1.0
4,154,733	-				-0.3
4,154,737	+				+0.1
4,154,754	-				-0.9
4,154,754	-				+0.5
4,154,755	+				+0.2
4,154,755	+				-0.4
4,154,755	+				-0.6
4,154,755	+				+0.2
4,154,756	-				-0.2
4,154,756	-				+1.0
4,154,756	-				-0.9
4,154,756	-				-0.1
4,154,756	-				-0.2
4,154,756	-				+0.1
4,154,808	+				-0.7
4,154,808	+				+0.1
4,154,808	+				-0.2
4,154,808	+				+0.5
4,154,808	+				+0.5
4,154,809	-				+1.7
4,154,866	+		DDA3937_RS18205	0.10	-0.7
4,154,867	-		DDA3937_RS18205	0.10	+0.0
4,154,887	-		DDA3937_RS18205	0.13	-0.5
4,154,931	-		DDA3937_RS18205	0.20	+0.5
4,155,035	+		DDA3937_RS18205	0.34	+0.4
4,155,035	+		DDA3937_RS18205	0.34	-0.4
4,155,035	+		DDA3937_RS18205	0.34	+0.1
4,155,035	+		DDA3937_RS18205	0.34	-0.1
4,155,036	-		DDA3937_RS18205	0.35	-0.7
4,155,147	+		DDA3937_RS18205	0.51	-0.1
4,155,148	-		DDA3937_RS18205	0.51	+0.1
4,155,165	+		DDA3937_RS18205	0.53	-1.6
4,155,165	+		DDA3937_RS18205	0.53	-1.0
4,155,169	+		DDA3937_RS18205	0.54	-0.1
4,155,169	+		DDA3937_RS18205	0.54	-0.2
4,155,170	-		DDA3937_RS18205	0.54	-0.9
4,155,170	-		DDA3937_RS18205	0.54	-0.4
4,155,170	-		DDA3937_RS18205	0.54	-0.8
4,155,189	+		DDA3937_RS18205	0.57	+0.7
4,155,189	+		DDA3937_RS18205	0.57	-0.4
4,155,189	+		DDA3937_RS18205	0.57	-0.2
4,155,190	-		DDA3937_RS18205	0.57	+0.5
4,155,190	-		DDA3937_RS18205	0.57	+0.6
4,155,190	-		DDA3937_RS18205	0.57	+1.2
4,155,190	-		DDA3937_RS18205	0.57	+1.3
4,155,190	-		DDA3937_RS18205	0.57	+0.3
4,155,190	-		DDA3937_RS18205	0.57	-0.0