Strain Fitness in Dickeya dadantii 3937 around DDA3937_RS17640

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
4,017,340	+		DDA3937_RS17635	0.41	-0.5
4,017,340	+		DDA3937_RS17635	0.41	-1.2
4,017,340	+		DDA3937_RS17635	0.41	-0.4
4,017,341	-		DDA3937_RS17635	0.41	-0.5
4,017,341	-		DDA3937_RS17635	0.41	+0.1
4,017,341	-		DDA3937_RS17635	0.41	-0.5
4,017,341	-		DDA3937_RS17635	0.41	-0.4
4,017,341	-		DDA3937_RS17635	0.41	+0.2
4,017,362	-		DDA3937_RS17635	0.43	-0.2
4,017,362	-		DDA3937_RS17635	0.43	-1.2
4,017,423	+		DDA3937_RS17635	0.46	-1.2
4,017,522	+		DDA3937_RS17635	0.53	-1.7
4,017,523	-		DDA3937_RS17635	0.53	+0.3
4,017,612	+		DDA3937_RS17635	0.59	-0.8
4,017,612	+		DDA3937_RS17635	0.59	-0.3
4,017,613	-		DDA3937_RS17635	0.59	-0.1
4,017,640	+		DDA3937_RS17635	0.60	-0.1
4,017,640	+		DDA3937_RS17635	0.60	+0.1
4,017,712	+		DDA3937_RS17635	0.65	-0.6
4,017,712	+		DDA3937_RS17635	0.65	-0.1
4,017,712	+		DDA3937_RS17635	0.65	-0.6
4,017,712	+		DDA3937_RS17635	0.65	-0.2
4,017,712	+		DDA3937_RS17635	0.65	-0.4
4,017,713	-		DDA3937_RS17635	0.65	-2.4
4,017,713	-		DDA3937_RS17635	0.65	-0.2
4,017,713	-		DDA3937_RS17635	0.65	-0.2
4,017,713	-		DDA3937_RS17635	0.65	+1.1
4,017,713	-		DDA3937_RS17635	0.65	+0.1
4,017,931	+		DDA3937_RS17635	0.79	-0.5
4,017,994	+		DDA3937_RS17635	0.83	-0.6
4,017,995	-		DDA3937_RS17635	0.83	+0.2
4,017,995	-		DDA3937_RS17635	0.83	+0.0
4,018,020	+		DDA3937_RS17635	0.85	-0.8
4,018,020	+		DDA3937_RS17635	0.85	-0.2
4,018,020	+		DDA3937_RS17635	0.85	-0.2
4,018,021	-		DDA3937_RS17635	0.85	-0.7
4,018,021	-		DDA3937_RS17635	0.85	+0.8
4,018,172	+				-0.9
4,018,173	-				+0.3
4,018,198	-				-0.6
4,018,216	-				-1.3
4,018,225	-				-0.7
4,018,283	+				-0.1
4,018,291	+				+1.4
4,018,291	+				+0.4
4,018,291	+				-0.2
4,018,291	+				-0.5
4,018,292	-				+0.6
4,018,292	-				-0.4
4,018,295	+				+1.1
4,018,296	-				-0.2
4,018,296	-				-0.2
4,018,296	-				+0.3
4,018,343	+				+0.4
4,018,343	+				-0.7
4,018,344	-				-1.2
4,018,401	+		DDA3937_RS17640	0.20	-2.4
4,018,401	+		DDA3937_RS17640	0.20	-1.9
4,018,402	-		DDA3937_RS17640	0.20	-1.4
4,018,560	+		DDA3937_RS17640	0.53	+0.4
4,018,561	-				-0.5
4,018,561	-		DDA3937_RS17640	0.54	-1.2
4,018,567	+		DDA3937_RS17640	0.55	-1.2
4,018,567	+		DDA3937_RS17640	0.55	-0.9
4,018,568	-		DDA3937_RS17640	0.55	-2.4
4,018,777	+				-0.7
4,018,777	+				+1.4
4,018,777	+				+0.7
4,018,777	+				-0.9
4,018,778	-				-0.7
4,018,778	-				+1.1
4,018,778	-				+0.7
4,018,778	-				+0.6
4,018,778	-				-0.5
4,018,849	-				+0.4
4,018,921	+		DDA3937_RS17645	0.11	+0.3
4,019,025	+		DDA3937_RS17645	0.33	+0.1
4,019,026	-		DDA3937_RS17645	0.34	+0.1
4,019,035	+		DDA3937_RS17645	0.35	-0.9
4,019,036	-		DDA3937_RS17645	0.36	+0.4
4,019,036	-		DDA3937_RS17645	0.36	-0.6
4,019,036	-		DDA3937_RS17645	0.36	+1.4
4,019,038	+		DDA3937_RS17645	0.36	-3.2
4,019,038	+		DDA3937_RS17645	0.36	+0.1
4,019,038	+		DDA3937_RS17645	0.36	+0.4
4,019,039	-		DDA3937_RS17645	0.36	-1.9
4,019,039	-		DDA3937_RS17645	0.36	+0.6
4,019,039	-		DDA3937_RS17645	0.36	-0.2
4,019,121	+		DDA3937_RS17645	0.54	+0.1
4,019,121	+		DDA3937_RS17645	0.54	-0.4
4,019,224	+		DDA3937_RS17645	0.76	+0.2
4,019,282	+		DDA3937_RS17645	0.89	-0.3
4,019,332	+				-0.0
4,019,362	+				-0.2
4,019,362	+				-0.5
4,019,362	+				+0.4
4,019,363	-				+0.6
4,019,363	-				+0.1
4,019,363	-				+0.1
4,019,363	-				-0.8
4,019,363	-				+0.5
4,019,512	+		DDA3937_RS17650	0.86	+0.1
4,019,512	+		DDA3937_RS17650	0.86	-0.4
4,019,512	+		DDA3937_RS17650	0.86	+1.0
4,019,513	-		DDA3937_RS17650	0.86	+0.0
4,019,513	-		DDA3937_RS17650	0.86	-0.5
4,019,513	-		DDA3937_RS17650	0.86	+0.5
4,019,513	-		DDA3937_RS17650	0.86	+1.4
4,019,513	-		DDA3937_RS17650	0.86	+0.2
4,019,646	+		DDA3937_RS17655	0.14	-1.5
4,019,646	+		DDA3937_RS17655	0.14	-1.5
4,019,716	-		DDA3937_RS17655	0.25	+0.5
4,019,716	-		DDA3937_RS17655	0.25	+0.1