Strain Fitness in Dickeya dadantii 3937 around DDA3937_RS17630

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
4,014,883	+				+1.0
4,014,991	-				-0.4
4,015,131	-				-0.2
4,015,393	-		DDA3937_RS17625	0.39	-0.6
4,015,403	+		DDA3937_RS17625	0.40	-2.1
4,015,500	+		DDA3937_RS17625	0.57	-0.6
4,015,500	+		DDA3937_RS17625	0.57	-0.2
4,015,501	-		DDA3937_RS17625	0.57	+0.1
4,015,515	+		DDA3937_RS17625	0.60	-0.1
4,015,522	+		DDA3937_RS17625	0.61	-0.6
4,015,522	+		DDA3937_RS17625	0.61	-0.4
4,015,524	+		DDA3937_RS17625	0.61	-0.7
4,015,524	+		DDA3937_RS17625	0.61	-1.4
4,015,525	-		DDA3937_RS17625	0.61	-0.6
4,015,536	+		DDA3937_RS17625	0.63	-0.2
4,015,537	-				-0.5
4,015,537	-		DDA3937_RS17625	0.63	-0.8
4,015,537	-		DDA3937_RS17625	0.63	-0.4
4,015,559	+		DDA3937_RS17625	0.67	-1.5
4,015,560	-		DDA3937_RS17625	0.67	-0.0
4,015,566	-		DDA3937_RS17625	0.68	-1.8
4,015,603	-		DDA3937_RS17625	0.74	-0.9
4,015,644	-		DDA3937_RS17625	0.81	+1.4
4,015,716	+				-0.4
4,015,716	+				+1.7
4,015,716	+				+0.2
4,015,716	+				+0.2
4,015,716	+				-0.0
4,015,716	+				+4.3
4,015,716	+				-0.6
4,015,717	-				+0.1
4,015,735	+				+0.7
4,015,735	+				-0.3
4,015,735	+				-1.4
4,015,735	+				-0.0
4,015,735	+				+0.4
4,015,736	-				-0.7
4,015,750	+				-1.1
4,015,890	+		DDA3937_RS17630	0.16	-0.0
4,015,948	-		DDA3937_RS17630	0.24	+1.0
4,016,008	+		DDA3937_RS17630	0.31	-2.9
4,016,008	+		DDA3937_RS17630	0.31	+0.6
4,016,008	+		DDA3937_RS17630	0.31	+2.7
4,016,008	+		DDA3937_RS17630	0.31	-0.2
4,016,009	-		DDA3937_RS17630	0.31	+0.1
4,016,009	-		DDA3937_RS17630	0.31	-1.0
4,016,047	+		DDA3937_RS17630	0.36	+0.4
4,016,057	-		DDA3937_RS17630	0.37	-0.1
4,016,058	+		DDA3937_RS17630	0.37	-1.1
4,016,058	+		DDA3937_RS17630	0.37	+1.1
4,016,058	+		DDA3937_RS17630	0.37	+0.8
4,016,059	-		DDA3937_RS17630	0.38	+1.4
4,016,063	+		DDA3937_RS17630	0.38	-0.7
4,016,063	+		DDA3937_RS17630	0.38	+0.5
4,016,063	+		DDA3937_RS17630	0.38	+0.1
4,016,064	-		DDA3937_RS17630	0.38	-1.0
4,016,064	-		DDA3937_RS17630	0.38	+1.9
4,016,064	-		DDA3937_RS17630	0.38	+0.5
4,016,064	-		DDA3937_RS17630	0.38	+1.5
4,016,106	+		DDA3937_RS17630	0.43	-0.6
4,016,179	-		DDA3937_RS17630	0.53	+0.2
4,016,197	-		DDA3937_RS17630	0.55	-0.1
4,016,444	-		DDA3937_RS17630	0.86	-2.4
4,016,460	-		DDA3937_RS17630	0.88	-0.3
4,016,493	+				+0.1
4,016,551	-				-0.2
4,016,581	-				-0.3
4,016,581	-				+0.8
4,016,615	-				-0.2
4,016,617	+				+0.2
4,016,641	+				-0.4
4,016,646	-				-0.1
4,016,673	-				-0.2
4,016,674	+				+0.0
4,016,674	+				+0.2
4,016,675	-				-1.1
4,016,728	+				+0.2
4,016,728	+				-0.2
4,016,729	-				+1.6
4,016,730	+				-0.9
4,016,731	-				-1.0
4,016,800	+				-0.6
4,016,800	+				+0.1
4,016,841	+				-2.1
4,016,842	-				-0.7
4,016,856	+				-0.5
4,016,856	+				-0.1
4,016,857	-		DDA3937_RS17635	0.10	+0.7
4,016,862	+		DDA3937_RS17635	0.10	-0.8
4,016,862	+		DDA3937_RS17635	0.10	+1.4
4,016,863	-		DDA3937_RS17635	0.10	+0.8
4,016,882	-		DDA3937_RS17635	0.12	+2.1
4,016,994	+		DDA3937_RS17635	0.19	-1.2
4,017,010	+		DDA3937_RS17635	0.20	-0.3
4,017,010	+		DDA3937_RS17635	0.20	-2.9
4,017,011	-		DDA3937_RS17635	0.20	-0.0
4,017,013	+		DDA3937_RS17635	0.20	-1.0
4,017,013	+		DDA3937_RS17635	0.20	+2.2
4,017,013	+		DDA3937_RS17635	0.20	+0.2
4,017,014	-		DDA3937_RS17635	0.20	+0.6
4,017,014	-		DDA3937_RS17635	0.20	-0.5
4,017,014	-		DDA3937_RS17635	0.20	+0.7
4,017,014	-		DDA3937_RS17635	0.20	-0.2
4,017,014	-		DDA3937_RS17635	0.20	-0.7
4,017,014	-		DDA3937_RS17635	0.20	-0.3
4,017,055	+		DDA3937_RS17635	0.23	+1.3
4,017,055	+		DDA3937_RS17635	0.23	-0.9
4,017,055	+		DDA3937_RS17635	0.23	-1.2
4,017,056	-				-1.2
4,017,056	-		DDA3937_RS17635	0.23	-0.4
4,017,056	-		DDA3937_RS17635	0.23	-1.7
4,017,056	-		DDA3937_RS17635	0.23	+0.4
4,017,060	+		DDA3937_RS17635	0.23	+0.1
4,017,060	+		DDA3937_RS17635	0.23	-0.4
4,017,060	+				-1.2
4,017,060	+		DDA3937_RS17635	0.23	-0.9
4,017,061	-		DDA3937_RS17635	0.23	-0.4
4,017,061	-				+2.7
4,017,061	-		DDA3937_RS17635	0.23	-0.6
4,017,061	-		DDA3937_RS17635	0.23	-0.5
4,017,147	+		DDA3937_RS17635	0.29	-1.0
4,017,201	-		DDA3937_RS17635	0.32	-0.6
4,017,201	-		DDA3937_RS17635	0.32	+0.1
4,017,201	-		DDA3937_RS17635	0.32	-0.1
4,017,275	-		DDA3937_RS17635	0.37	-0.9
4,017,275	-		DDA3937_RS17635	0.37	+0.1
4,017,275	-		DDA3937_RS17635	0.37	+1.7
4,017,275	-		DDA3937_RS17635	0.37	-2.7
4,017,276	+		DDA3937_RS17635	0.37	-0.2
4,017,340	+		DDA3937_RS17635	0.41	-0.5
4,017,340	+		DDA3937_RS17635	0.41	-1.2
4,017,340	+		DDA3937_RS17635	0.41	-0.4
4,017,341	-		DDA3937_RS17635	0.41	-0.5
4,017,341	-		DDA3937_RS17635	0.41	+0.1
4,017,341	-		DDA3937_RS17635	0.41	-0.5
4,017,341	-		DDA3937_RS17635	0.41	-0.4
4,017,341	-		DDA3937_RS17635	0.41	+0.2
4,017,362	-		DDA3937_RS17635	0.43	-0.2
4,017,362	-		DDA3937_RS17635	0.43	-1.2
4,017,423	+		DDA3937_RS17635	0.46	-1.2
4,017,522	+		DDA3937_RS17635	0.53	-1.7
4,017,523	-		DDA3937_RS17635	0.53	+0.3