Strain Fitness in Dickeya dadantii 3937 around DDA3937_RS17500

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
3,978,967	+		DDA3937_RS17495	0.58	-1.2
3,978,967	+		DDA3937_RS17495	0.58	+0.1
3,978,968	-		DDA3937_RS17495	0.58	-0.7
3,978,968	-		DDA3937_RS17495	0.58	+0.1
3,979,065	-		DDA3937_RS17495	0.65	-0.9
3,979,087	-		DDA3937_RS17495	0.66	+0.3
3,979,087	-		DDA3937_RS17495	0.66	-0.2
3,979,100	+		DDA3937_RS17495	0.67	-1.4
3,979,100	+		DDA3937_RS17495	0.67	+0.4
3,979,100	+		DDA3937_RS17495	0.67	-0.1
3,979,100	+		DDA3937_RS17495	0.67	-1.2
3,979,100	+		DDA3937_RS17495	0.67	-1.2
3,979,100	+		DDA3937_RS17495	0.67	-0.1
3,979,101	-				+1.1
3,979,101	-		DDA3937_RS17495	0.67	-0.2
3,979,101	-		DDA3937_RS17495	0.67	+0.4
3,979,101	-		DDA3937_RS17495	0.67	+0.5
3,979,101	-		DDA3937_RS17495	0.67	+0.7
3,979,109	+		DDA3937_RS17495	0.68	+0.5
3,979,110	-				+0.1
3,979,112	-		DDA3937_RS17495	0.68	-0.6
3,979,112	-		DDA3937_RS17495	0.68	+1.7
3,979,112	-		DDA3937_RS17495	0.68	-0.3
3,979,216	+		DDA3937_RS17495	0.76	-0.3
3,979,216	+		DDA3937_RS17495	0.76	-0.2
3,979,216	+		DDA3937_RS17495	0.76	-0.1
3,979,217	-		DDA3937_RS17495	0.76	-1.4
3,979,370	+		DDA3937_RS17495	0.86	+0.0
3,979,370	+		DDA3937_RS17495	0.86	+0.2
3,979,370	+		DDA3937_RS17495	0.86	+0.1
3,979,371	-		DDA3937_RS17495	0.87	-0.4
3,979,371	-		DDA3937_RS17495	0.87	+0.3
3,979,473	+				-0.3
3,979,473	+				-0.6
3,979,473	+				+0.4
3,979,474	-				-0.6
3,979,474	-				-0.6
3,979,474	-				-0.9
3,979,474	-				+1.7
3,979,474	-				-1.2
3,979,474	-				+0.8
3,979,474	-				-0.5
3,979,494	+				-0.1
3,979,494	+				+1.4
3,979,498	+				-0.9
3,979,498	+				+0.2
3,979,587	+				-0.5
3,979,587	+				+0.5
3,979,587	+				+0.1
3,979,588	-				-1.2
3,979,588	-				+0.5
3,979,588	-				+0.3
3,979,588	-				+0.2
3,979,588	-				-0.5
3,979,588	-				-1.1
3,979,631	+				-0.3
3,979,631	+				-1.0
3,979,631	+				-0.2
3,979,662	+				-0.9
3,979,684	-				+0.2
3,979,709	+				-0.4
3,979,709	+				-1.7
3,979,710	-				+0.1
3,979,717	+				-1.2
3,979,717	+				-0.2
3,979,717	+				+0.8
3,979,717	+				-0.5
3,979,717	+				+0.8
3,979,717	+				-0.7
3,979,718	-				+0.1
3,979,718	-				-0.1
3,979,720	-				+0.7
3,979,734	+				-0.5
3,979,735	-				-1.2
3,979,735	-				+0.1
3,979,735	-				+0.9
3,979,735	-				+0.3
3,979,735	-				-0.5
3,979,735	-				+0.3
3,979,789	+				+0.7
3,979,792	-				-0.8
3,979,815	+				+0.1
3,979,822	+				-0.1
3,979,823	-				-0.0
3,979,823	-				+0.9
3,979,825	+				+0.4
3,979,825	+				-0.2
3,979,825	+				-0.3
3,979,826	-				-0.4
3,979,826	-				+0.5
3,979,826	-				-0.4
3,979,826	-				-0.2
3,979,826	-				+0.8
3,979,912	+				-0.6
3,979,912	+				+0.9
3,979,916	+				-0.8
3,979,916	+				-0.6
3,979,917	-				-0.8
3,979,917	-				-0.7
3,979,950	+				+0.6
3,979,951	-				+0.4
3,979,951	-				+1.3
3,980,095	-		DDA3937_RS17500	0.18	+0.6
3,980,095	-		DDA3937_RS17500	0.18	-0.7
3,980,095	-		DDA3937_RS17500	0.18	+0.2
3,980,100	-		DDA3937_RS17500	0.19	-0.7
3,980,100	-		DDA3937_RS17500	0.19	+0.6
3,980,100	-		DDA3937_RS17500	0.19	-0.6
3,980,126	+		DDA3937_RS17500	0.21	-0.5
3,980,126	+		DDA3937_RS17500	0.21	-0.6
3,980,126	+		DDA3937_RS17500	0.21	-0.3
3,980,127	-		DDA3937_RS17500	0.21	+0.1
3,980,127	-		DDA3937_RS17500	0.21	+0.3
3,980,127	-		DDA3937_RS17500	0.21	-0.3
3,980,127	-		DDA3937_RS17500	0.21	+0.7
3,980,127	-		DDA3937_RS17500	0.21	+0.1
3,980,127	-		DDA3937_RS17500	0.21	-1.9
3,980,127	-		DDA3937_RS17500	0.21	-2.1
3,980,245	-		DDA3937_RS17500	0.33	-0.2
3,980,264	+		DDA3937_RS17500	0.35	+1.2
3,980,264	+		DDA3937_RS17500	0.35	+0.8
3,980,264	+		DDA3937_RS17500	0.35	-0.3
3,980,264	+		DDA3937_RS17500	0.35	+0.2
3,980,264	+		DDA3937_RS17500	0.35	+0.2
3,980,264	+		DDA3937_RS17500	0.35	-0.6
3,980,265	-		DDA3937_RS17500	0.35	-0.1
3,980,265	-		DDA3937_RS17500	0.35	-0.3
3,980,265	-		DDA3937_RS17500	0.35	-0.1
3,980,330	+		DDA3937_RS17500	0.42	-0.6
3,980,330	+		DDA3937_RS17500	0.42	+2.7
3,980,330	+		DDA3937_RS17500	0.42	+0.1
3,980,330	+		DDA3937_RS17500	0.42	-0.0
3,980,330	+		DDA3937_RS17500	0.42	-0.5
3,980,331	-		DDA3937_RS17500	0.42	-0.8
3,980,331	-		DDA3937_RS17500	0.42	+0.5
3,980,331	-		DDA3937_RS17500	0.42	+0.9
3,980,335	-		DDA3937_RS17500	0.42	-0.2
3,980,498	+		DDA3937_RS17500	0.59	+0.9
3,980,498	+		DDA3937_RS17500	0.59	+0.1
3,980,498	+		DDA3937_RS17500	0.59	-0.2
3,980,499	-		DDA3937_RS17500	0.59	-0.1
3,980,499	-		DDA3937_RS17500	0.59	+0.1
3,980,499	-		DDA3937_RS17500	0.59	+0.7
3,980,499	-		DDA3937_RS17500	0.59	-0.9
3,980,516	+		DDA3937_RS17500	0.61	+0.8
3,980,516	+		DDA3937_RS17500	0.61	-1.1
3,980,516	+		DDA3937_RS17500	0.61	-0.4
3,980,517	-		DDA3937_RS17500	0.61	+0.1
3,980,517	-		DDA3937_RS17500	0.61	-0.1
3,980,519	+		DDA3937_RS17500	0.61	+0.3
3,980,519	+		DDA3937_RS17500	0.61	-0.2
3,980,519	+		DDA3937_RS17500	0.61	-0.2
3,980,519	+		DDA3937_RS17500	0.61	-0.2
3,980,520	-		DDA3937_RS17500	0.61	-0.9
3,980,520	-		DDA3937_RS17500	0.61	-0.9
3,980,520	-		DDA3937_RS17500	0.61	+0.6
3,980,520	-		DDA3937_RS17500	0.61	+0.7
3,980,520	-		DDA3937_RS17500	0.61	-0.9
3,980,520	-		DDA3937_RS17500	0.61	+0.3
3,980,520	-		DDA3937_RS17500	0.61	-0.9
3,980,520	-		DDA3937_RS17500	0.61	-0.4
3,980,607	+		DDA3937_RS17500	0.70	+0.1
3,980,608	-		DDA3937_RS17500	0.70	-0.1
3,980,621	+		DDA3937_RS17500	0.71	-0.4
3,980,645	+		DDA3937_RS17500	0.74	+0.3
3,980,645	+		DDA3937_RS17500	0.74	-0.2
3,980,645	+		DDA3937_RS17500	0.74	-0.3
3,980,645	+		DDA3937_RS17500	0.74	+0.4
3,980,677	+		DDA3937_RS17500	0.77	-0.3
3,980,677	+		DDA3937_RS17500	0.77	-0.5
3,980,677	+		DDA3937_RS17500	0.77	-1.6
3,980,677	+		DDA3937_RS17500	0.77	+0.1
3,980,677	+		DDA3937_RS17500	0.77	-1.0
3,980,678	-		DDA3937_RS17500	0.77	-0.9
3,980,678	-		DDA3937_RS17500	0.77	+0.3
3,980,678	-		DDA3937_RS17500	0.77	-0.3
3,980,751	-		DDA3937_RS17500	0.84	-0.8
3,980,751	-		DDA3937_RS17500	0.84	+0.4
3,980,768	+		DDA3937_RS17500	0.86	+0.1
3,980,768	+		DDA3937_RS17500	0.86	-0.7
3,980,768	+		DDA3937_RS17500	0.86	+1.1
3,980,768	+		DDA3937_RS17500	0.86	-0.2
3,980,768	+		DDA3937_RS17500	0.86	-0.9
3,980,768	+		DDA3937_RS17500	0.86	-0.7
3,980,768	+		DDA3937_RS17500	0.86	-0.6
3,980,769	-		DDA3937_RS17500	0.86	-1.6
3,980,769	-		DDA3937_RS17500	0.86	-1.1
3,980,769	-		DDA3937_RS17500	0.86	+0.1
3,980,769	-		DDA3937_RS17500	0.86	-0.5
3,980,769	-		DDA3937_RS17500	0.86	+0.3
3,980,779	-		DDA3937_RS17500	0.87	-0.9
3,980,820	+				+0.2
3,980,843	+				-1.4
3,980,843	+				-2.8
3,980,844	-				-0.1
3,980,852	+				+0.9
3,980,852	+				+0.1
3,980,852	+				+0.1
3,980,853	-				-0.7
3,980,853	-				-0.3
3,980,893	-				-0.1
3,980,893	-				-0.6
3,980,922	-				-0.2
3,980,922	-				-1.0
3,980,929	-				+0.5
3,980,929	-				+0.2
3,980,929	-				-1.5
3,980,953	+				+1.3
3,980,953	+				-0.2
3,980,953	+				-0.4
3,980,953	+				+0.0
3,980,953	+				-1.4
3,980,953	+				-2.6
3,980,953	+				-0.5
3,980,953	+				-0.9
3,980,954	-				-0.1
3,980,954	-				-1.0
3,980,954	-				-0.1
3,980,954	-				+0.3
3,980,954	-				-0.9
3,980,954	-				-0.3
3,980,954	-				+0.2
3,980,954	-				+0.6
3,980,970	+				-0.8
3,980,970	+				+0.4
3,980,971	-				-0.0
3,980,971	-				+0.2
3,980,977	+				-1.1
3,980,977	+				+0.6
3,980,977	+				-0.5
3,980,977	+				+0.5
3,980,977	+				+0.8
3,980,977	+				+0.5
3,980,977	+				+0.7
3,980,977	+				-1.5
3,980,978	-				-0.9
3,980,978	-				+0.8
3,980,978	-				+0.1
3,980,978	-				+0.3
3,980,978	-				-0.6
3,980,978	-				-0.9
3,980,978	-				-1.2
3,980,978	-				-0.3