Strain Fitness in Dickeya dadantii 3937 around DDA3937_RS15815

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
3,619,141	-		DDA3937_RS15805	0.84	-0.6
3,619,488	-				-0.0
3,619,488	-				+0.8
3,619,536	+				-0.1
3,619,536	+				+1.0
3,619,537	-				-0.4
3,619,577	+				-0.5
3,619,578	-				+0.0
3,619,578	-				-0.6
3,619,578	-				-0.6
3,619,581	+				-0.2
3,619,582	-				+0.1
3,619,782	+				+0.2
3,619,782	+				-1.8
3,619,782	+				+0.1
3,619,832	+		DDA3937_RS15815	0.43	-1.0
3,619,832	+		DDA3937_RS15815	0.43	-0.0
3,619,881	+				-0.2
3,619,909	+				+0.7
3,619,909	+				+1.6
3,619,923	+				+0.3
3,619,923	+				+0.7
3,619,923	+				+0.2
3,619,923	+				-1.0
3,620,093	+				-0.6
3,620,128	+				-0.8
3,620,128	+				-0.6
3,620,151	+				+0.4
3,620,183	+				-0.8
3,620,190	+				-1.1
3,620,190	+				+0.9
3,620,190	+				-0.9
3,620,191	-				-0.8
3,620,191	-				-1.5
3,620,191	-				-2.0
3,620,191	-				-0.3
3,620,191	-				-1.4
3,620,245	+				+0.2
3,620,245	+				-2.4
3,620,246	-				+1.0
3,620,253	+				+0.2
3,620,254	-				-0.3
3,620,254	-				+0.3
3,620,263	+				-1.0
3,620,263	+				-1.8
3,620,264	-				+0.2
3,620,317	+				-0.4
3,620,368	+				-0.1
3,620,380	-				-1.4
3,620,386	+				-1.4
3,620,386	+				+1.3
3,620,386	+				-0.0
3,620,393	-				+0.8
3,620,393	-				-0.5
3,620,393	-				+0.6
3,620,394	+				+0.3
3,620,394	+				-0.8
3,620,394	+				-0.3
3,620,395	-				-0.8
3,620,411	+				-0.2
3,620,411	+				-0.2
3,620,411	+				+2.6
3,620,412	-				-0.6
3,620,412	-				-2.0
3,620,412	-				+1.1
3,620,415	+				-0.2
3,620,415	+				+0.3
3,620,416	-				-0.4
3,620,581	-		DDA3937_RS15830	0.40	-1.8
3,620,596	+		DDA3937_RS15830	0.43	+0.3
3,620,596	+		DDA3937_RS15830	0.43	-0.7
3,620,596	+		DDA3937_RS15830	0.43	-0.4
3,620,596	+		DDA3937_RS15830	0.43	+0.5
3,620,596	+		DDA3937_RS15830	0.43	-0.4
3,620,597	-		DDA3937_RS15830	0.44	-0.4
3,620,597	-		DDA3937_RS15830	0.44	-0.1
3,620,597	-		DDA3937_RS15830	0.44	-0.4
3,620,597	-		DDA3937_RS15830	0.44	-1.0
3,620,597	-		DDA3937_RS15830	0.44	-0.8
3,620,597	-		DDA3937_RS15830	0.44	+0.8
3,620,629	-		DDA3937_RS15830	0.51	-0.8
3,620,642	+		DDA3937_RS15830	0.54	+0.3
3,620,643	-		DDA3937_RS15830	0.54	+0.4
3,620,649	+		DDA3937_RS15830	0.56	-2.2
3,620,663	+		DDA3937_RS15830	0.59	-0.6
3,620,664	-		DDA3937_RS15830	0.59	+0.2
3,620,673	+		DDA3937_RS15830	0.61	-0.8
3,620,673	+		DDA3937_RS15830	0.61	-0.5
3,620,673	+		DDA3937_RS15830	0.61	-0.1
3,620,674	-		DDA3937_RS15830	0.61	-1.0
3,620,714	+		DDA3937_RS15830	0.71	-0.6
3,620,715	-		DDA3937_RS15830	0.71	-0.7
3,620,764	+		DDA3937_RS15830	0.82	-0.0
3,620,764	+		DDA3937_RS15830	0.82	-0.2
3,620,764	+		DDA3937_RS15830	0.82	+1.3
3,620,765	-		DDA3937_RS15830	0.82	+0.2
3,620,765	-		DDA3937_RS15830	0.82	+1.0
3,620,765	-		DDA3937_RS15830	0.82	-0.2
3,620,765	-		DDA3937_RS15830	0.82	-1.0
3,620,809	+				-0.9
3,620,840	-				-0.2
3,620,840	-				-0.7
3,620,850	+				+0.0