Strain Fitness in Dickeya dadantii 3937 around DDA3937_RS15405

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
3,531,759	+		DDA3937_RS15390	0.67	+0.4
3,531,760	-		DDA3937_RS15390	0.67	+0.1
3,531,771	+		DDA3937_RS15390	0.69	+0.2
3,531,771	+		DDA3937_RS15390	0.69	-0.1
3,531,771	+		DDA3937_RS15390	0.69	+0.5
3,531,771	+		DDA3937_RS15390	0.69	-0.0
3,531,771	+		DDA3937_RS15390	0.69	-0.4
3,531,771	+		DDA3937_RS15390	0.69	-1.2
3,531,771	+		DDA3937_RS15390	0.69	+0.6
3,531,771	+		DDA3937_RS15390	0.69	-0.4
3,531,771	+		DDA3937_RS15390	0.69	-1.0
3,531,772	-		DDA3937_RS15390	0.69	+1.0
3,531,772	-		DDA3937_RS15390	0.69	-0.0
3,531,772	-		DDA3937_RS15390	0.69	-0.1
3,531,772	-		DDA3937_RS15390	0.69	-1.4
3,531,772	-		DDA3937_RS15390	0.69	+1.4
3,531,772	-		DDA3937_RS15390	0.69	-0.4
3,531,772	-		DDA3937_RS15390	0.69	+0.8
3,531,772	-		DDA3937_RS15390	0.69	+1.2
3,531,772	-		DDA3937_RS15390	0.69	-0.4
3,531,772	-		DDA3937_RS15390	0.69	+1.0
3,531,772	-		DDA3937_RS15390	0.69	-0.3
3,531,772	-		DDA3937_RS15390	0.69	-0.4
3,531,772	-		DDA3937_RS15390	0.69	-0.3
3,531,800	+		DDA3937_RS15390	0.73	-0.2
3,531,800	+		DDA3937_RS15390	0.73	-0.0
3,531,915	+				+1.0
3,531,916	-				-0.8
3,531,973	+				+0.2
3,531,981	+				-1.3
3,532,000	+				-0.4
3,532,000	+				+0.5
3,532,000	+				+1.0
3,532,000	+				-0.2
3,532,000	+				-0.0
3,532,000	+				-1.0
3,532,000	+				-0.5
3,532,000	+				-0.8
3,532,001	-				-0.7
3,532,001	-				-0.7
3,532,001	-				-0.3
3,532,001	-				+0.6
3,532,001	-				+0.7
3,532,001	-				+0.3
3,532,001	-				+0.1
3,532,001	-				+0.1
3,532,001	-				+0.2
3,532,005	+				+0.2
3,532,005	+				-0.4
3,532,018	+				+0.0
3,532,018	+				-2.0
3,532,019	-				+0.1
3,532,056	+				-0.6
3,532,057	-				-0.5
3,532,090	-				+0.1
3,532,094	-				+0.7
3,532,306	-				-0.3
3,532,310	-				+0.3
3,532,361	+				+0.2
3,532,386	-				+0.5
3,532,405	+				-0.0
3,532,405	+				-1.1
3,532,406	-				-0.2
3,532,406	-				-1.0
3,532,449	+				+0.4
3,532,449	+				-0.2
3,532,452	+				+0.0
3,532,452	+				+0.1
3,532,453	-				+0.8
3,532,456	+				-1.0
3,532,479	+				-0.3
3,532,479	+				+0.2
3,532,479	+				-0.6
3,532,479	+				-1.0
3,532,480	-				-1.0
3,532,498	+				-0.4
3,532,524	-				-0.3
3,532,640	+				-1.3
3,532,641	-				-0.6
3,532,668	+				-0.3
3,532,731	+		DDA3937_RS15405	0.24	-1.4
3,532,749	+		DDA3937_RS15405	0.30	-0.1
3,532,771	+		DDA3937_RS15405	0.37	-1.8
3,532,772	-		DDA3937_RS15405	0.37	-0.2
3,532,772	-		DDA3937_RS15405	0.37	-0.0
3,532,808	-		DDA3937_RS15405	0.48	-1.2
3,532,819	+		DDA3937_RS15405	0.52	-0.5
3,532,837	+		DDA3937_RS15405	0.58	-0.9
3,532,943	-				+0.0
3,532,948	+				+0.6
3,532,957	-				-0.4
3,533,009	+				-0.6
3,533,009	+				-1.0
3,533,010	-				-0.2
3,533,076	+				+0.5
3,533,077	-				-0.7
3,533,084	+				-1.9
3,533,085	-				-0.6
3,533,085	-				-0.7
3,533,101	+				-1.1
3,533,102	-				+0.2
3,533,123	-				-0.4
3,533,141	+				+0.1
3,533,142	-				+0.7
3,533,158	+				-2.3
3,533,158	+				-0.6
3,533,159	-				-0.2
3,533,159	-				-1.4
3,533,159	-				+0.2
3,533,159	-				-1.2
3,533,180	+				+0.2
3,533,180	+				-1.2
3,533,180	+				+0.3
3,533,239	+				-0.7
3,533,245	+				-0.4
3,533,246	-				-0.5
3,533,246	-				-1.0
3,533,246	-				+0.5
3,533,262	+				+0.2
3,533,263	-				-0.9
3,533,268	-				+0.6
3,533,336	-				-0.7
3,533,367	+				-0.9
3,533,377	-				-0.1
3,533,377	-				-0.6
3,533,404	-				-0.4
3,533,428	+				+1.2
3,533,428	+				-0.9
3,533,434	+				-1.4
3,533,452	+				-1.0
3,533,476	+				-2.3
3,533,477	-				+0.1
3,533,512	+				-0.7
3,533,513	-				+0.4
3,533,518	-				+0.4
3,533,530	+				+0.4
3,533,530	+				-1.2
3,533,530	+				+0.1
3,533,531	-				-0.4
3,533,535	-				-1.0
3,533,547	+				-0.0
3,533,547	+				+0.6
3,533,547	+				-0.2
3,533,547	+				-1.1
3,533,548	-				+0.5
3,533,548	-				-0.6
3,533,548	-				-1.0
3,533,550	+				+0.0
3,533,551	-				-1.3
3,533,551	-				-0.1
3,533,557	+				+0.6
3,533,557	+				+0.3
3,533,557	+				-0.4
3,533,557	+				-1.4
3,533,561	+				+1.2
3,533,561	+				-0.4
3,533,561	+				-0.2
3,533,561	+				-1.4
3,533,600	-		DDA3937_RS22405	0.29	-3.0
3,533,649	+		DDA3937_RS22405	0.64	+1.1
3,533,649	+		DDA3937_RS22405	0.64	-1.0
3,533,649	+		DDA3937_RS22405	0.64	+0.2
3,533,649	+		DDA3937_RS22405	0.64	+1.0
3,533,673	+		DDA3937_RS22405	0.81	-0.8
3,533,703	-				+1.0
3,533,751	+				+0.0
3,533,751	+				+0.7
3,533,799	+				+0.1
3,533,800	-				+0.2
3,533,808	+				-0.4
3,533,809	-				-0.3
3,533,809	-				+0.8
3,533,863	+				-1.9
3,533,863	+				+0.6
3,533,863	+				+1.0
3,533,863	+				+0.7
3,533,864	-				-0.0
3,533,864	-				+1.0
3,533,864	-				+0.3
3,533,870	-				+1.1
3,533,875	+				-0.5
3,533,895	+				-0.0